SAD phasing by combination of direct methods with the Solve/Resolve procedure

Acta Crystallographica Section D: Biological Crystallography

Volumn 60, Issue 7, 2004, Pages 1244-1253

  Wang, J W ^a   Chen, J R ^a   Gu, Y X ^a   Zheng, C D ^a   Jiang, F ^a   Fan, H F ^a   Terwilliger, T C ^b   Hao, Q ^a,c  

^a INSTITUTE OF PHYSICS   (China)

^b LOS ALAMOS NATIONAL LABORATORY   (United States)

^c Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AZURIN; DRUG DERIVATIVE; HISTONE LYSINE METHYLTRANSFERASE; HISTONE METHYLTRANSFERASE; RUSTICYANIN;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; METHODOLOGY; PROBABILITY; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

AZURIN; CRYSTALLOGRAPHY, X-RAY; HISTONE-LYSINE N-METHYLTRANSFERASE; MODELS, MOLECULAR; PROBABILITY; PROTEIN STRUCTURE, TERTIARY;

EID: 16644390240     PISSN: 09074449     EISSN: None     Source Type: Journal    
DOI: 10.1107/S0907444904010674     Document Type: Article

References (72)

1. Abrahams, J. P. (1997). Acta Cryst. D53, 371-376.
2. Bing-Dong, S., Shen-Ping, L., Yuan-Xin, G., Hai-Fu, F., Ke, H., Jia-Xing, Y. & Woolfson, M. M. (1995). Acta Cryst. D51, 342-346.
3. Sikka, S. K. (1973). Acta Cryst. A29, 211-212.
4. Blow, D. M. & Crick, F. H. C. (1959). Acta Cryst. 12, 794-802.
5. Blundell, T. L. & Johnson, L. N. (1976). Protein Crystallography, p. 177. London: Academic Press.
6. Bond, C. S., Shaw, M. P., Alphey, M. S. & Hunter, W. N. (2001). Acta Cryst. D57, 755-758.
7. Bricogne, G. (1984). Acta Cryst. A40, 410-445.
8. Bricogne, G. (1988). Acta Cryst. A44, 517-545.
9. Brown, J., Esnouf, R. M., Jones, M. A., Linnell, J., Harlos, K., Hassan, A. B. & Jones, E. Y. (2002). EMBO J. 21, 1054-1062.
10. Chen, J. R., Gu, Y. X., Zheng, C. D., Jiang, F., Jiang, T., Liang, D. C. & Fan, H. F. (2004). In preparation.
11. Cochran, W. (1955). Acta Cryst. 8, 473-478.
12. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
13. Cowtan, K. (1994). Jnt CCP4/ESF-EACBM Newsl. Protein Crystallogr. 31, 34-38.
14. Cowtan, K. D. & Main, P. (1993). Acta Cryst. D49, 148-157.
15. Cowtan, K. D. & Main, P. (1996). Acta Cryst. D52, 43-48.
16. Dauter, Z., Dauter, M., de La Fortelle, E., Bricogne, G. & Sheldrick, G. M. (1999). J. Mol. Biol. 289, 83-92.
17. Dauter, Z., Dauter, M. & Dodson, E. (2002). Acta Cryst. D58, 494-506.
18. Debreczeni, J. E., Bunkoczi, G., Girmann, B. & Sheldrick, G. M. (2003). Acta Cryst. D59, 393-395.
19. Dodd, F., Hasnain, S. S., Abraham, Z. H., Eady, R. R. & Smith, B. E. (1995). Acta Cryst. D51, 1052-1064.
20. Fan, H. F. (1965). Chin. Phys. pp. 1429-1435.
21. Fan, H. F. & Gu, Y. X. (1985). Acta Cryst. A41, 280-284.
22. Fan, H. F., Han, F. S. & Qian, J. Z. (1984). Acta Cryst. A40, 495-498.
23. Fan, H. F., Han, F. S., Qian, J. Z. & Yao, J. X. (1984). Acta Cryst. A40, 489-495.
24. Fan, H. F., Hao, Q., Gu, Y. X., Qian, J. Z., Zheng, C. D. & Ke, H. (1990). Acta Cryst. A46, 935-939.
25. Giacovazzo, C. (1983). Acta Cryst. A39, 585-592.
26. Giacovazzo, C. & Siliqi, D. (1997). Acta Cryst. A53, 789-798.
27. Goldstein, A. & Zhang, K. Y. J. (1998). Acta Cryst. D54, 1230-1244.
28. Gordon, E. J., Leonard, G. A., McSweeney, S. & Zagalsky, P. F. (2001). Acta Cryst. D57, 1230-1237.
29. Graaff, R. A. G. de, Hilge, M., van der Plaas, J. L. & Abrahams, J. P. (2001). Acta Cryst. D57, 1857-1862.
30. Hao, Q., Gu, Y. X., Zheng, C. D. & Fan, H. F. (2000). J. Appl. Cryst. 33, 980-981.
31. Harvey, I., Hao, Q., Duke, E. M. H., Ingledew, W. J. & Hasnain, S. S. (1998). Acta Cryst. D54, 629-635.
32. Hauptman, H. A. (1982). Acta Cryst. A38, 632-641.
33. Hazell, A. C. (1970). Nature (London), 227, 269.
34. Heinerman, J. J. L., Krabbendam, H., Kroon, J. & Spek, A. L. (1978). Acta Cryst. A34, 447-450.
35. Hendrickson, W. A. & Lattman, E. E. (1970). Acta Cryst. B26, 136-143.
36. Hendrickson, W. A. & Teeter, M. M. (1981). Nature (London), 290, 107-113.
37. Huang, Q. Q., Liu, Q. & Hao, Q. (2004). In preparation.
38. Karle, J. (1966). Acta Cryst. 21, 273-276.
39. Lemke, C. T., Smith, G. D. & Howell, P. L. (2002). Acta Cryst. D58, 2096-2101.
40. Li, S., Finley, J., Liu, Z.-J., Qiu, S.-H., Chen, H., Luan, C.-H., Carson, M., Tsao, J., Johnson, D., Lin, G., Zhao, J., Thomas, W., Nagy, L. A., Sha, B., DeLucas, L. J., Wang, B.-C. & Luo, M. (2002). J. Biol. Chem. 277, 48596-48601.
41. Liu, Z.-J., Vysotski, E. S., Chen, C.-J., Rose, J. P., Lee, J. & Wang, B.-C. (2000). Protein Sci. 9, 2085-2093.
42. Lunin, V. Y. (1993). Acta Cryst. D49, 90-99.
43. Micossi, E., Hunter, W. N. & Leonard, G. A. (2002). Acta Cryst. D58, 21-28.
44. Olczak, A., Cianci, M., Hao, Q., Rizkallah, P. J., Raftery, J. & Helliwell, J. R. (2003). Acta Cryst. A59, 327-334.
45. Pannu, N. S. & Read, R. J. (2004). Acta Cryst. D60, 22-27.
46. Perrakis, A., Sixma, T. K., Wilson, K. S. & Lamzin, V. S. (1997). Acta Cryst. D53, 448-455.
47. Podjarny, A. D., Bhat, T. N. & Zwick, M. (1987). Annu. Rev. Biophys. Chem. 16, 351-373.
48. Prince, E., Sjolin, L. & Alenljung, R. (1988). Acta Cryst. A44, 216-222.
49. Ramachandran, J. N. & Raman, S. (1956). Curr. Sci. 25, 348-51.
50. Ramagopal, U. A., Dauter, M. & Dauter, Z. (2003). Acta Cryst. D59, 1020-1027.
51. Refaat, L. S., Tate, C. & Woolfson, M. M. (1996). Acta Cryst. D52, 252-256.
52. Roberts, A. L. U. & Brünger, A. T. (1995). Acta Cryst. D51, 990-1002.
53. Rossmann, M. G. & Arnold, E. (2001). International Tables for Crystallography, Vol. B, edited by U. Shmueli, pp. 230-258. Dordrecht: Kluwer Academic Publishers.
54. Sim, G. A. (1959). Acta Cryst. 12, 813-815.
55. Terwilliger, T. C. (1999). Acta Cryst. D55, 1863-1871.
56. Terwilliger, T. C. (2000). Acta Cryst. D56, 965-972.
57. Terwilliger, T. C. (2001). Acta Cryst. D57, 1755-1762.
58. Terwilliger, T. C. (2002). Acta Cryst. D58, 2082-2086.
59. Terwilliger, T. C. (2003). Acta Cryst. D59, 1688-1701.
60. Terwilliger, T. C. & Berendzen, J. (1999). Acta Cryst. D55, 849-861.
61. Vellieux, F. M. D. A. P., Hunt, J. F., Roy, S. & Read, R. J. (1995). J. Appl. Cryst. 28, 347-351.
62. Wang, B.-C. (1985). Methods Enzymol. 115, 90-112.
63. Wang, J. W., Gu, Y. X., Zheng, C. D., Jiang, F. & Fan, H. F. (2004). S-SAD phasing by OASIS-2004. Sixth Conference of the Asian Crystallogr. Assoc., 27-30 June, Hong Kong, People's Republic of China. Abstract Wang_A191.
64. Wilson, A. J. C. (1949). Acta Cryst. 2, 318-321.
65. Wilson, C. & Agard, D. A. (1993). Acta Cryst. A49, 97-104.
66. Wilson, J. R., Jing, C., Walker, P. A., Martin, S. R., Howell, S. A., Blackburn, G. M., Gamblin, S. J. & Xiao, B. (2002). Cell, 111, 105-115.
67. Xiang, S., Carter, C. W. Jr, Bricogne, G. & Gilmore, C. J. (1993). Acta Cryst. D49, 193-212.
68. Yang, C. & Pflugrath, J. W. (2001). Acta Cryst. D57, 1480-1490.
69. Zhang, K. Y. J. (1993). Acta Cryst. D49, 213-222.
70. Zhang, K. Y. J., Cowtan, K. D. & Main, P. (1997). Methods Enzymol. 277, 53-64.
71. Zhang, K. Y. J. & Main, P. (1990). Acta Cryst. A46, 41-46.
72. Xiao-Feng, Z., Hai-fu, F., Hao, Q., Dodd, F. E. & Hasnain, S. S. (1996). Acta Cryst. D52, 937-941.