Partial island submergence and speciation in an adaptive radiation: A multilocus analysis of the Cuban green anoles

Proceedings of the Royal Society B: Biological Sciences

Volumn 271, Issue 1554, 2004, Pages 2257-2265

  Glor, Richard E ^a   Gifford, Matthew E ^a   Larson, Allan ^a   Losos, Jonathan B ^a   Rodríguez Schettino, Lourdes ^b   Chamizo Lara, Ada R ^b   Jackman, Todd R ^c  

^a WASHINGTON UNIVERSITY   (United States)

^b INSTITUTO DE ECOLOGÍA Y SISTEMÁTICA   (Cuba)

^c VILLANOVA UNIVERSITY   (United States)

Author keywords

Adaptive radiation; Anolis; Cuba; Hybridization; Introgression; Speciation

Indexed keywords

CELL NUCLEUS DNA; MITOCHONDRIAL DNA; RHODOPSIN;

ADAPTIVE RADIATION; HYBRIDIZATION; INTROGRESSION; LIZARD; SPECIATION (BIOLOGY);

ADAPTIVE RADIATION; ALLOPATRY; ARTICLE; CUBA; GENE FLOW; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE; HYBRIDIZATION; INTROGRESSION; ISLAND (GEOLOGICAL); LIZARD; MALE; MIOCENE; MOLECULAR PHYLOGENY; MORPHOLOGICAL ADAPTATION; NONHUMAN; PRIORITY JOURNAL; SPECIES DIFFERENTIATION; SYMPATRY; ANIMAL; BAYES THEOREM; BIOLOGICAL MODEL; COMPARATIVE STUDY; DEMOGRAPHY; DNA SEQUENCE; GENETICS; GEOGRAPHY; GEOLOGY; HISTOLOGY; MOLECULAR GENETICS; MORPHOMETRICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; PIGMENTATION; POPULATION GENETICS; SPECIES DIFFERENCE;

ATLANTIC ISLANDS; ATLANTIC OCEAN; CARIBBEAN ISLANDS; CUBA; GREATER ANTILLES; OCEANIC REGIONS; WORLD;

ANIMALS; BASE SEQUENCE; BAYES THEOREM; BODY WEIGHTS AND MEASURES; CUBA; DEMOGRAPHY; DNA, MITOCHONDRIAL; GENETICS, POPULATION; GEOGRAPHY; GEOLOGY; LIZARDS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; PIGMENTATION; RHODOPSIN; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

EID: 16644375376     PISSN: 09628452     EISSN: 14712970     Source Type: Journal    
DOI: 10.1098/rspb.2004.2819     Document Type: Article

References (62)

1. Birks, S. M. & Edwards, S. V. 2002 A phylogeny of the megapodes (Aves: Megapodiidae) based on nuclear and mitochondrial DNA sequences. Mol. Phylogenet. Evol. 23, 408-421.
2. Bossuyt, F. & Milinkovitch, M. C. 2000 Convergent adaptive radiations in Madagascan and Asian ranid frogs reveal covariation between larval and adult traits. Proc. Natl Acad. Sci. USA 97, 6585-6590.
3. Bremer, K. 1994 Branch support and tree stability. Cladistics 10, 295-304.
4. Burnell, K. L. & Hedges, S. B. 1990 Relationships of West Indian Anolis (Sauria: Iguanidae): an approach using slow-evolving protein loci. Carib. J. Sci. 26, 7-30.
5. Chen, W. J., Bonillo, C. & Lecointre, G. 2003 Repeatability of clades as a criterion of reliability: a case study for molecular phylogeny of Acanthomorpha (Teleostei) with larger number of taxa. Mol. Phylogenet. Evol. 26, 262-288.
6. de Queiroz, K., Chu, L.-R. & Losos, J. B. 1998 A second Anolis lizard in Dominican amber and the systematics and ecological morphology of Dominican amber anoles. Am. Mus. Novitates 3249, 1-22.
7. García-París, M., Alcobendas, M., Buckley, D. & Wake, D. B. 2003 Dispersal of viviparity across contact zones in Iberian populations of fire salamanders (Salamandra) inferred from discordance of genetic and morphological traits. Evolution 57, 129-143.
8. Gifford, M. E., Powell, R., Larson A. & Gutberlet Jr, R. L. 2004 Population structure and history of a phenotypically variable teiid lizard (Ameiva chrysolaema) from Hispaniola: the influence of a geologically complex island. Mol. Phylogenet. Evol. 32, 735-748.
9. Glor, R. E., Kolbe, J. K., Powell, R., Larson, A. & Losos, J. B. 2003 Phylogenetic analysis of ecological and morphological diversification in Hispaniolan trunk-ground anoles (Anolis cybotes group). Evolution 57, 2383-2397.
10. Good, J. M., Demboski, J. R., Nagorsen, D. W. & Sullivan, J. 2003 Phylogeography and introgressive hybridization: chipmunks (genus Tamias) in the northern Rocky Mountains. Evolution 57, 1900-1916.
11. Goodman, S. J., Barton, N. H., Swanson, G., Abernethy, K. & Pemberton, J. M. 1999 Introgression through rare hybridization: a genetic study of a hybrid zone between red and sika deer (genus Cervus) in Argyll, Scotland. Genetics 152, 355-371.
12. Graham, A. 2003 Geohistory models and Cenozoic paleoenvironments of the Caribbean region. Syst. Bot. 28, 378-386.
13. Gyllensten, U. & Wilson, A. C. 1987 Interspecific mitochondrial DNA transfer and the colonization of Scandinavia by mice. Genet. Res. 49, 25-29.
14. Hare, M. P., Cipriano, F. & Palumbi, S. R. 2002 Genetic evidence on the demography of speciation in allopatric dolphin species. Evolution 56, 804-816.
15. Harrison, R. G. & Bogdanowicz, S. M. 1997 Patterns of variation and linkage disequilibrium in a field cricket hybrid zone. Evolution 51, 493-505.
16. Hedges, S. B. 1996 The origin of West Indian amphibians and reptiles. In Contributions to West Indian herpetology: a tribute to Albert Schwartz vol. 12 (ed. R. Powell & R. W. Henderson), pp. 95-128. Ithaca, NY: Society for the Study of Amphibians and Reptiles.
17. Hoelzer, G. A. 1997 Inferring phylogenies from mtDNA variation: mitochondrial-gene trees versus nuclear-gene trees revisited. Evolution 51, 622-626.
18. Huelsenbeck, J. P. & Ronquist, F. 2001 MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754-755.
19. Iturralde-Vinent, M. A. & MacPhee, R. D. E. 1999 Paleogeography of the Caribbean region: implications for Cenozoic biogeography. Bull. Am. Mus. Nat. Hist. 238, 1-95.
20. Jackman, T. R., Larson, A., de Queiroz, K. & Losos, J. B. 1999 Phylogenetic relationships and tempo of early diversification in Anolis lizards. Syst. Biol. 48, 254-285.
21. Jackman, T. R., Irschick, D. J., de Queiroz, K., Losos, J. B. & Larson, A. 2002 A molecular phylogenetic perspective on evolution of the lizards of the Anolis grahami series. J. Exp. Zool. 294, 1-16.
22. Kawamura, S. & Yokoyama, S. 1994 Cloning of the rhodopsin-encoding gene from the rod-less lizard Anolis carolinensis. Gene 149, 267-270.
23. Losos, J. B. 1996 Ecological and evolutionary determinants of the species-area relation in Caribbean anoline lizards. Phil. Trans. R. Soc. Lond. B 351, 847-854.
24. Losos, J. B. 2004 Adaptation and speciation in Caribbean Anolis lizards. In Adaptive speciation (ed. U. Dieckmann, M. Doebeli, J. A. J. Metz, & D. Tautz). Cambridge University Press. (In the press.)
25. Losos, J. B. & Schluter, D. 2000 Analysis of an evolutionary species-area relationship. Nature 408, 847-850.
26. Macey, J. R., Schulte, J. A., Ananjeva, N. B., Larson, A., Rastegar-Pouyani, N., Shammakov, S. M. & Papenfuss, T. J. 1998 Phylogenetic relationships among agamid lizards of the Laudakia caucasia species group: testing hypotheses of biogeographic fragmentation and an area cladogram for the Iranian Plateau. Mol. Phylogenet. Evol. 10, 118-131.
27. MacPhee, R. D. E., Iturralde-Vinent, M. A. & Gaffney, E. S. 2003 Domo de Zaza, an early Miocene vertebrate locality in south-central Cuba, with notes on the tectonic evolution of Puerto Rico and the Mona Passage. Am. Mus. Novitates 3394, 142.
28. Malhotra, A. & Thorpe, R. S. 1991 Microgeographic variation in Anolis oculatus, on the island of Dominica, West Indies. J. Evol. Biol. 4, 321-335.
29. Malhotra, A. & Thorpe, R. S. 1993 An experimental field-study of a eurytopic anole, Anolis oculatus. J. Zool. 229, 163-170.
30. Malhotra, A. & Thorpe, R. S. 1994 Parallels between island lizards suggests selection on mitochondrial-DNA and morphology. Proc. R. Soc. Lond. B 257, 37-42.
31. Malhotra, A. & Thorpe, R. S. 1997a Microgeographic variation in scalation of Anolis oculatus (Dominica, West Indies): a multivariate analysis. Herpetologica 53, 49-62.
32. Malhotra, A. & Thorpe, R. S. 1997e Size and shape variation in a Lesser Antillean anole, Anolis oculatus (Sauria: Iguanidae) in relation to habitat. Biol. J. Linn. Soc. 60, 53-72.
33. Malhotra, A. & Thorpe, R. S. 2000 The dynamics of natural selection and vicariance in the Dominican anole: patterns of within-island molecular and morphological divergence. Evolution 54, 245-258.
34. Moore, W. S. 1995 Inferring phylogenies from mtDNA variation: mitochondrial-gene trees versus nuclear-gene trees. Evolution 49, 718-726.
35. Morando, M., Avila, L. J. & Sites, J. W. 2003 Sampling strategies for delimiting species: genes, individuals, and populations in the Liolaemus elongatus-kriegi complex (Squamata: Liolaemidae) in Andean-Patagonian South America. Syst. Biol. 52, 159-185.
36. Nicholson, K. E., Glor, R. E., Kolbe, J. K., Larson, A., Hedges, S. B. & Losos, J. B. 2004 Mainland colonization by an island species. J. Biogeogr. (In the press.)
37. Ogden, R. & Thorpe, R. S. 2002 Molecular evidence for ecological speciation in tropical habitats. Proc. Nad Acad. Sci. USA 99, 13612-13615.
38. Page, R. D. M. 2000 Extracting species trees from complex gene trees: reconciled trees and vertebrate phylogeny. Mol. Phylogenet. Evol. 14, 89-106.
39. Pérez-Beato, O. & Alvarez, B. 1986 Limites de variación de la coloración en Anolis allinsoni: hibridación o polimorfismo? Poeyana 327, 1-5.
40. Powell, R., Ottenwalder, J. A. & Inchaustegui, S. J. 1999 The Hispaniolan herpetofauna: diversity, endemism, and historical perspectives, with comments on Navassa Island. In Caribbean amphibians and reptiles (ed. B. I. Crother), pp. 93-168. San Diego, CA: Academic.
41. Rodríguez-Schettino, L. 1999 The iguanid lizards of Cuba. Gainesville, FL: The University of Florida Press.
42. Rüber, L., Verheyen, E., Sturmbauer, C. & Meyer, A. 1998 Lake level fluctuations and speciation in rock-dwelling cichlid fish in Lake Tanganyika, East Africa. In Evolution on islands (ed. P. R. Grant), pp. 225-240. Oxford University Press.
43. Ruibal, R. & Williams, E. E. 1961 Two sympatric Cuban anoles of the carolinensis group. Bull. Mus. Comp. Zool. 125, 183-208.
44. Schliewen, U., Rassmann, K., Markmann, M., Markert, J., Kocher, T. & Tautz, D. 2001 Genetic and ecological divergence of a monophyletic cichlid species pair under fully sympatric conditions in Lake Ejagham, Cameroon. Mol. Ecol. 10, 1471-1488.
45. Schliewen, U. K., Tautz, D. & Pääbo, S. 1994 Sympatric speciation suggested by monophyly of crater lake cichlids. Nature 368, 629-632.
46. Schluter, D. 2000 The ecology of adaptive radiation, Oxford Series in Ecology and Evolution. New York: Oxford University Press.
47. Schneider, C. J. 1996 Distinguishing between primary and secondary intergradation among morphologically differentiated populations of Anolis marmoratus. Mol. Ecol. 5, 239-249.
48. Schoener, T. W. 1977 Competition and the niche. In Biology of the Reptilia vol. 7 (ed. C. Gans & D. W. Tinkle), pp. 35-136. New York: Academic.
49. Schwartz, A. & Thomas, R. 1975 A check-list of West Indian amphibians and reptiles. Carnegie Mus. Nat. Hist. Spec. Publ. 1, 1-216.
50. Seehausen, O. & van Alphen, J. M. 1999 Can sympatric speciation by disruptive sexual selection explain rapid evolution of cichlid diversity in Lake Victoria? Ecol. Lett. 2, 262-271.
51. Shaw, P. W., Turner, G. F., Idid, M. R., Robinson, R. L. & Carvalho, G. R. 2000 Genetic population structure indicates sympatric speciation of Lake Malawi pelagic cichlids. Proc. R. Soc. Lond. B 267, 2273-2280. (doi:10.1098/ rspb.2000.1279)
52. Stafford, P. J. & Meyer, J. R. 1999 A guide to the reptiles of Belize. New York: Academic.
53. Stenson, A. G., Malhotra, A. & Thorpe, R. S. 2002 Population differentiation and nuclear gene flow in the Dominican anole (Anolis oculatus). Mol. Ecol. 11, 1679-1688.
54. Sturmbauer, C. & Meyer, A. 1992 Genetic-divergence, speciation and morphological stasis in a lineage of African cichlid fishes. Nature 358, 578-581.
55. Sturmbauer, C., Baric, S., Salzburger, W., Ruber, L. & Verheyen, E. 2001 Lake level fluctuations synchronize genetic divergences of cichlid fishes in African lakes. Mol. Biol. Evol. 18, 144-154.
56. Swofford, D. 2002 PAUP*. Phylogenetic analysis using parsimony (* and other methods). Sunderland, MA: Sinauer.
57. Tegelström, H. 1987 Transfer of mitochondrial DNA from the northern red-backed vole (Clethionomys rutilus) to the bank vole (C. glareolus). J. Mol. Evol. 24, 218-227.
58. Thomas, Y., Bethenod, M. T., Pelozuelo, L., Frerot, B. & Bourguet, D. 2003 Genetic isolation between two sympatric host-plant races of the European corn borer, Ostrinia nubilalis Hubner. I. Sex pheromone, moth emergence timing, and parasitism. Evolution 57, 261-273.
59. Thorpe, R. S. & Malhotra, A. 1996 Molecular and morphological evolution within small islands. Phil. Trans. R. Soc. Lond. B 351, 815-822.
60. Thorpe, R. S. & Stenson, A. G. 2003 Phylogeny, paraphyly and ecological adaptation of the colour and pattern in the Anolis roquet complex on Martinique. Mol. Ecol. 12, 117-132.
61. Veith, M., Kosuch, J. & Vences, M. 2003 Climatic oscillations triggered post-Messinian speciation of Western Palearctic brown frogs (Amphibia, Ranidae). Mol. Phylogenet. Evol. 26, 310-327.
62. Wiens, J. J. & Penkrot, T. A. 2002 Delimiting species using DNA and morphologicical variation and discordant species limits in spiny lizards (Sceloporus). Syst. Biol. 51, 69-91.