Phylogenetic Relationships among Agamid Lizards of theLaudakia caucasiaSpecies Group: Testing Hypotheses of Biogeographic Fragmentation and an Area Cladogram for the Iranian Plateau

Molecular Phylogenetics and Evolution

Volumn 10, Issue 1, 1998, Pages 118-131

  Macey, J Robert ^a   Schulte II, James A ^a   Ananjeva, Natalia B ^b   Larson, Allan ^a   Rastegar Pouyani, Nasrullah ^c   Shammakov, Sakhat M ^d   Papenfuss, Theodore J ^e  

^a WASHINGTON UNIVERSITY   (United States)

^b ZOOLOGICAL INSTITUTE   (Russian Federation)

^c UNIVERSITY OF GOTHENBURG   (Sweden)

^d Turkmenistan Academy of Sciences   (Turkmenistan)

^e UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Agamidae; Armenia; Asia; historical biogeography; Iguania; Iran; mitochondrial DNA; phylogenetics; Reptilia; Russia; Sauria; Tajikistan; Turkmenistan

Indexed keywords

MITOCHONDRIAL DNA; TRANSFER RNA;

ANIMAL; ARTICLE; BASE PAIRING; CLASSIFICATION; DNA REPLICATION; GENETIC VARIABILITY; GENETICS; HUMAN; IRAN; LIZARD; MOLECULAR GENETICS; PHYLOGENY; SEQUENCE ALIGNMENT;

ANIMALS; BASE PAIRING; DNA REPLICATION; DNA, MITOCHONDRIAL; HUMANS; IRAN; LIZARDS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, TRANSFER; SEQUENCE ALIGNMENT; VARIATION (GENETICS);

EID: 0032132881     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1997.0478     Document Type: Article

References (32)

1. Abdrakhmatov K. Ye., Aldazhanov S. A., Hager B. H., Hamburger M. W., Herring T. A., Kalabaev K. B., Makarov V. I., Molnar P., Panasyuk S. V., Prilepin M. T., Reilinger R. E., Sadybakasov I. S., Souter B. J., Trapeznikov Yu. A., Tsurkov V. Ye., Zubovich A. V. Relatively recent construction of the Tien Shan inferred from GPS measurements of present-day crustal deformation rates. Nature. 384:1996;450-453.
2. Anan'eva N. B., Tuniev B. S. Some aspects of historical biogeography of Asian rock agamids. Russ. J. Herpetol. 1:1994;42-52.
3. Ananjeva N. B., Atayev Ch. Stellio caucasius triannulata. Tr. Zool. Inst. Akad. Nauk. SSSR. 124:1984;4-11.
4. Anderson S. C. Preliminary key to the turtles, lizards and amphisbaenians of Iran. Fieldiana: Zool. 65:1974;27-44.
5. Anderson S., Bankier A. T., Barrell B. G., de Bruijn M. H. L., Coulson A. R., Drouin J., Eperon I. C., Nierlich D. P., Roe B. A., Sanger F., Schreier P. H., Smith A. J. H., Staden R., Young I. G. Sequence and organization of the human mitochondrial genome. Nature. 290:1981;457-465.
6. Bremer K. Branch support and tree stability. Cladistics. 10:1994;295-304.
7. Brennicke A., Clayton D. A. Nucleotide assignment of alkali-sensitive sites in mouse mitochondrial DNA. J. Biol. Chem. 256:1981;10613-10617.
8. Dercourt J., Zonenshain L. P., Ricou L.-E., Kazmin V. G., Le Pichon X., Knipper A. L., Grandjacquet C., Sbortshikov I. M., Geyssant J., Lepvrier C., Pechersky D. H., Boulin J., Sibuet J.-C., Savostin L. A., Sorokhtin O., Westphal M., Bazhenov M. L., Lauer J. P., Biju-Duval B. Geological evolution of the tethys belt from the Atlantic to the Pamirs since the Lias. Tectonophysics. 123:1986;241-315.
9. Felsenstein J. Confidence limits on phylogenies with a molecular clock. Syst. Zool. 34:1985;152-161.
10. Felsenstein, J. 1995, PHYLIP: Phylogeny inference package, University of Washington, Seattle.
11. Girdler R. W. The evolution of the Gulf of Aden and Red Sea in space and time. Deep-Sea Res. Part A. 31:1984;747-762.
12. Hixson J. E., Wong T. W., Clayton D. A. Both the conserved and divergent 5′-flanking sequences are required for initiation at the human mitochondrial origin of light strand replication. J. Biol. Chem. 261:1986;2384-2390.
13. Kumazawa Y., Nishida M. Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J. Mol. Evol. 37:1993;380-398.
14. Larson A. The comparison of morphological and molecular data in phylogenetic systematics. Molecular Ecology and Evolution: Approaches and Applications. 1994;Birkhäuser, Basel. p. 371-390.
15. Latifi M. The Snakes of Iran. 1984;Iran Department of the Environment, Tehran.
16. Macey J. R., Larson A., Ananjeva N. B., Fang Z., Papenfuss T. J. Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome. Mol. Biol. Evol. 14:1997a;91-104.
17. Macey J. R., Larson A., Ananjeva N. B., Papenfuss T. J. Replication slippage may cause parallel evolution in the secondary structures of mitochondrial transfer RNAs. Mol. Biol. Evol. 14:1997b;30-39.
18. Macey J. R., Larson A., Ananjeva N. B., Papenfuss T. J. Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards. J. Mol. Evol. 44:1997c;660-674.
19. Macey J. R., Schulte J. A. II, Larson A., Fang Z., Wang Y., Tuniyev B. S., Papenfuss T. J. Phylogenetic relationships of toads in theBufo bufo. Mol. Phylogenet. Evol. 9:1998;80-87.
20. Macey J. R., Verma A. Homology in phylogenetic analysis: Alignment of transfer RNA genes and the phylogenetic position of snakes. Mol. Phylogenet. Evol. 7:1997;272-279.
21. Maddison, W. P. Maddison, D. R. 1992, MacClade: Analysis of Phylogeny and Character Evolution, Sinauer, Sunderland, MA.
22. Maniatis T., Fritsch E. F., Sambrook J. Molecular Cloning: A Laboratory Manual. 1982;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
23. Moritz C., Dowling T. E., Brown W. M. Evolution of animal mitochondrial DNA: Relevance for population biology and systematics. Annu. Rev. Ecol. Syst. 18:1987;269-292.
24. Sborshchikov I. M., Savostin L. A., Zonenshan L. P. Present plate tectonics between Turkey and Tibet. Tectonophysics. 79:1981;45-73.
25. Sengör, A. M. C. 1984, The Cimmeride Orogenic System and the Tectonics of Eurasia, Geol. Soc. Am. Boulder, CO.
26. Sengör, A. M. C. Altiner, D. Cin, A. Ustaomer, T. Hsu, K. J. 1988, Origin and assembly of the Tethyside orogenic collage at the expense of Gondwana Land, In, Gondwana and the Tethys, M. G. Audley-CharlesA. Hallam, 119, 181, Oxford Univ. Press, Oxford.
27. Swofford, D. L. 1993, PAUP: Phylogenetic Analysis Using Parsimony, Illinois Natural Hist. Survey, Urbana, IL.
28. Tapponier P., Mattauer M., Proust F., Cassaigneau C. Mesozoic ophiolites, sutures, and large-scale tectonic movements in Afghanistan. Earth Planet. Sci. Lett. 52:1981;355-371.
29. Templeton A. R. Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes. Evolution. 37:1983;221-244.
30. Tuniyev B. S., Atayev Ch., Shammakov S. Stellio erythrogaster nurgeldievi. Izv. Akad. Nauk. Turkm. SSR. 6:1991;50-60.
31. Zar J. H. Biostatistical Analysis. 1984;Prentice Hall International, Englewood Cliffs.
32. Zhang D.-X., Hewitt G. M. Nuclear integrations: Challenges for mitochondrial DNA markers. Trends Ecol. Evol. 11:1996;247-251.