-
1
-
-
0034222191
-
Computer-assisted analysis of regulatory signals in bacterial genomes. Attenuators of the operons involved metabolism of aromatic amino acids
-
Vitreschak A.G., Gelfand M.S. 2000. Computer-assisted analysis of regulatory signals in bacterial genomes. Attenuators of the operons involved metabolism of aromatic amino acids. Mol. Biol., 34, 545-552.
-
(2000)
Mol. Biol.
, vol.34
, pp. 545-552
-
-
Vitreschak, A.G.1
Gelfand, M.S.2
-
4
-
-
0035873307
-
Discovering common stem-loop motifs in unaligned RNA sequence
-
Gorodkin J., Stricklin S.L., Stormo G.D. 2001. Discovering common stem-loop motifs in unaligned RNA sequence. Nucleic Acids Res. 29, 2035-2044.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2035-2044
-
-
Gorodkin, J.1
Stricklin, S.L.2
Stormo, G.D.3
-
5
-
-
2942607685
-
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
-
Eddy S.R. 2002. A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure. BMC Bioinformatics. 3, 1-16.
-
(2002)
BMC Bioinformatics
, vol.3
, pp. 1-16
-
-
Eddy, S.R.1
-
9
-
-
1642551459
-
A modified algorithm to search for alternative RNA secondary structures and results of calculations
-
Leont'ev L.A., Lyubetskaya E.V., Lyubetsky V.A. 2002. A modified algorithm to search for alternative RNA secondary structures and results of calculations. Informatsionnye Protsessy. 2, 100-105 (http://www.jip.ru/).
-
(2002)
Informatsionnye Protsessy
, vol.2
, pp. 100-105
-
-
Leont'ev, L.A.1
Lyubetskaya, E.V.2
Lyubetsky, V.A.3
-
10
-
-
0031757669
-
Multiple sequence alignment with Clustal X
-
Jeanmougin F., Thompson J.D., Gouy M., Higgins D.O., Gibson T.J. 1998. Multiple sequence alignment with Clustal X. Trends Biochem. Sci. 23, 403-405.
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 403-405
-
-
Jeanmougin, F.1
Thompson, J.D.2
Gouy, M.3
Higgins, D.O.4
Gibson, T.J.5
-
11
-
-
1642551457
-
Identification of attenuation and antitermination regulation in prokaryotes
-
preprint 0003
-
Lathe W., Suyama M., Bork P. 2002. Identification of attenuation and antitermination regulation in prokaryotes. Genome Biology. 3, preprint 0003. (http://genome-biology.com/2002/3/6/preprint/0003).
-
(2002)
Genome Biology
, pp. 3
-
-
Lathe, W.1
Suyama, M.2
Bork, P.3
-
13
-
-
0033915990
-
PatSearch: A pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance
-
Pesole G., Liuni S., D'Souza M. 2000. PatSearch: a pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance. Bioinformatics. 16, 439-450.
-
(2000)
Bioinformatics
, vol.16
, pp. 439-450
-
-
Pesole, G.1
Liuni, S.2
D'Souza, M.3
-
14
-
-
0037100667
-
Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation
-
Vitreschak A.G., Rodionov D.A., Mironov A.A., Gelfand M.S. 2002. Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation. Nucleic Acids Res. 30, 3141-3151.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3141-3151
-
-
Vitreschak, A.G.1
Rodionov, D.A.2
Mironov, A.A.3
Gelfand, M.S.4
-
15
-
-
2242446202
-
Comparative genomics of thiamin biosynthesis in procaryotes: New genes and regulatory mechanisms
-
Rodionov D.A., Vitreschak A.G., Mironov A.A., Gelfand M.S. 2002. Comparative genomics of thiamin biosynthesis in procaryotes: new genes and regulatory mechanisms. J. Biol. Chem. 277, 48949-48959.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 48949-48959
-
-
Rodionov, D.A.1
Vitreschak, A.G.2
Mironov, A.A.3
Gelfand, M.S.4
-
16
-
-
85044699455
-
Computer-assisted analysis of regulatory signals in complete bacterial genomes. Initiation of translation in operons of the ribosomal proteins
-
Vitreschak A.G., Bansal A.K., Titov I.I., Gelfand M.S. 1999. Computer-assisted analysis of regulatory signals in complete bacterial genomes. Initiation of translation in operons of the ribosomal proteins. Biofizika. 44, 601-610.
-
(1999)
Biofizika
, vol.44
, pp. 601-610
-
-
Vitreschak, A.G.1
Bansal, A.K.2
Titov, I.I.3
Gelfand, M.S.4
-
17
-
-
0032601488
-
Regulation of the Bacillus subtilis pyrimidine biosynthetic operon by transcriptional attenuation: Control of gene expression by an mRNA-binding protein
-
Switzer R.L., Turner R.J., Lu Y. 1999. Regulation of the Bacillus subtilis pyrimidine biosynthetic operon by transcriptional attenuation: control of gene expression by an mRNA-binding protein. Progress Nucleic Acid Res. Mol. Biol. 62, 329-367.
-
(1999)
Progress Nucleic Acid Res. Mol. Biol.
, vol.62
, pp. 329-367
-
-
Switzer, R.L.1
Turner, R.J.2
Lu, Y.3
-
18
-
-
0028301062
-
Effects of transcriptional start site sequence and position on nucleotide-sensitive selection of alternative start sites at the pyrC promoter in Escherichia coli
-
Liu J., Turnbough C.L. Jr. 1994. Effects of transcriptional start site sequence and position on nucleotide-sensitive selection of alternative start sites at the pyrC promoter in Escherichia coli. J. Bacteriol. 176, 2938-2945.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2938-2945
-
-
Liu, J.1
Turnbough Jr., C.L.2
-
19
-
-
0031029049
-
Antitermination of transcription of catabolic operons
-
Rutberg B. 1997. Antitermination of transcription of catabolic operons. Mol. Microbiol. 23, 413-421.
-
(1997)
Mol. Microbiol.
, vol.23
, pp. 413-421
-
-
Rutberg, B.1
-
20
-
-
0003027868
-
-
Eds. Sonenshein A.L., Hoch J.A., Losick R. Washington, DC: American Soc. Microbiol.
-
Perkins J.B., Pero J.G. 2001. In Bacillus subtilis and its relatives: from genes to cells. Eds. Sonenshein A.L., Hoch J.A., Losick R. Washington, DC: American Soc. Microbiol., 279-293.
-
(2001)
Bacillus Subtilis and Its Relatives: From Genes to Cells
, pp. 279-293
-
-
Perkins, J.B.1
Pero, J.G.2
-
21
-
-
0035859828
-
A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria
-
Miranda-Rios J., Navarro M., Soberon M. 2001. A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria. Proc. Natl. Acad. Sci. USA. 98, 9736-9741.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 9736-9741
-
-
Miranda-Rios, J.1
Navarro, M.2
Soberon, M.3
-
22
-
-
0031771456
-
Bacillus subtilis tetA(L) gene expression: Evidence for regulation by translational reinitiation
-
Stasinopoulos S.J., Farr G.A., Bechhofer D.H. 1998. Bacillus subtilis tetA(L) gene expression: evidence for regulation by translational reinitiation. Mol. Microbiol. 30, 923-932.
-
(1998)
Mol. Microbiol.
, vol.30
, pp. 923-932
-
-
Stasinopoulos, S.J.1
Farr, G.A.2
Bechhofer, D.H.3
-
24
-
-
0031039254
-
Translation of the mRNA for the sporulation gene spoIIID of Bacillus subtilis is dependent upon translation of a small upstream open reading frame
-
Decatur A., McMurry M.T., Kunkel B.N., Losick R. 1997. Translation of the mRNA for the sporulation gene spoIIID of Bacillus subtilis is dependent upon translation of a small upstream open reading frame. J. Bacteriol. 179, 1324-1328.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1324-1328
-
-
Decatur, A.1
McMurry, M.T.2
Kunkel, B.N.3
Losick, R.4
|