-
1
-
-
0001031179
-
-
Brooks III, C. L., Karplus, M., and Pettitt, B. M., (1988) Adv. Chem. Phys., 71, 1.
-
(1988)
Adv. Chem. Phys.
, vol.71
, pp. 1
-
-
Brooks III, C.L.1
Karplus, M.2
Pettitt, B.M.3
-
3
-
-
0000885331
-
-
Brooks, B. R., Janezic, D., and Karplus, M., (1995) J. Compt. Chem., 16, 1522.
-
(1995)
J. Compt. Chem.
, vol.16
, pp. 1522
-
-
Brooks, B.R.1
Janezic, D.2
Karplus, M.3
-
4
-
-
84986473952
-
-
Janezic, D., Venable, R. M., and Brooks, B. R., (1995) J. Comput. Chem., 16, 1554.
-
(1995)
J. Comput. Chem.
, vol.16
, pp. 1554
-
-
Janezic, D.1
Venable, R.M.2
Brooks, B.R.3
-
5
-
-
0027441950
-
-
Amadei, A., Linssen, A. B. M., and Berendsen, H. J. C., (1993) Proteins, 17, 412.
-
(1993)
Proteins
, vol.17
, pp. 412
-
-
Amadei, A.1
Linssen, A.B.M.2
Berendsen, H.J.C.3
-
6
-
-
0022419152
-
-
Levitt, M., Sander, C., and Stern, P. S., (1985) J. Mol. Biol., 181, 423.
-
(1985)
J. Mol. Biol.
, vol.181
, pp. 423
-
-
Levitt, M.1
Sander, C.2
Stern, P.S.3
-
7
-
-
0032555216
-
-
Ma, J., and Karplus, M., (1998) Proc. Natl. Acad. Sci. USA, 95, 8502.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 8502
-
-
Ma, J.1
Karplus, M.2
-
8
-
-
0022111715
-
-
Brooks, B., and Karplus, M., (1985) Proc. Natl. Acad. Sci. USA, 82, 4995.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 4995
-
-
Brooks, B.1
Karplus, M.2
-
9
-
-
0025163070
-
-
Seno, Y., and Go, N., (1990) J. Mol. Biol., 216, 111.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 111
-
-
Seno, Y.1
Go, N.2
-
10
-
-
0025109873
-
-
Seno, Y., and Go, N., (1990) J Mol Biol, 216, 95.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 95
-
-
Seno, Y.1
Go, N.2
-
11
-
-
0030700726
-
-
Ma, J., and Karplus, M., (1997) J. Mol. Biol., 274, 114.
-
(1997)
J. Mol. Biol.
, vol.274
, pp. 114
-
-
Ma, J.1
Karplus, M.2
-
12
-
-
0030599027
-
-
Thomas, A., Field, M. J., and Perahia, D., (1996) J Mol Biol, 261, 490.
-
(1996)
J. Mol. Biol.
, vol.261
, pp. 490
-
-
Thomas, A.1
Field, M.J.2
Perahia, D.3
-
13
-
-
0030004936
-
-
Thomas, A., Field, M. J., Mouawad, L., and Perahia, D., (1996) J Mol Biol, 257, 1070.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 1070
-
-
Thomas, A.1
Field, M.J.2
Mouawad, L.3
Perahia, D.4
-
14
-
-
0032932341
-
-
Thomas, A., Hinsen, K., Field, M. J., and Perahia, D., (1999) Proteins, 34, 96.
-
(1999)
Proteins
, vol.34
, pp. 96
-
-
Thomas, A.1
Hinsen, K.2
Field, M.J.3
Perahia, D.4
-
15
-
-
0030623823
-
-
Bahar, I., Atilgan, A. R., and Erman, B., (1997) Fold Des, 2, 173.
-
(1997)
Fold Des.
, vol.2
, pp. 173
-
-
Bahar, I.1
Atilgan, A.R.2
Erman, B.3
-
16
-
-
0345973041
-
-
Haliloglu, T., Bahar, I., and Erman, B., (1997) Phys. Rev. Lett., 79, 3090.
-
(1997)
Phys. Rev. Lett.
, vol.79
, pp. 3090
-
-
Haliloglu, T.1
Bahar, I.2
Erman, B.3
-
17
-
-
0035132230
-
-
Atilgan, A. R., Durell, S. R., Jernigan, R. L., Demirel, M. C., Keskin, O., and Bahar, I., (2001) Biophys J. 80, 505.
-
(2001)
Biophys J.
, vol.80
, pp. 505
-
-
Atilgan, A.R.1
Durell, S.R.2
Jernigan, R.L.3
Demirel, M.C.4
Keskin, O.5
Bahar, I.6
-
19
-
-
0037080323
-
-
Keskin, O., Bahar, I., Flatow, D., Covell, D. G., and Jernigan, R. L., (2002) Biochemistry, 41, 491.
-
(2002)
Biochemistry
, vol.41
, pp. 491
-
-
Keskin, O.1
Bahar, I.2
Flatow, D.3
Covell, D.G.4
Jernigan, R.L.5
-
20
-
-
0037079578
-
-
Doruker, P., Jernigan, R. L., and Bahar, I., (2002) J. Comput. Chem., 23, 119.
-
(2002)
J. Comput. Chem.
, vol.23
, pp. 119
-
-
Doruker, P.1
Jernigan, R.L.2
Bahar, I.3
-
21
-
-
0035044995
-
-
Tama, F., and Sanejouand, Y. H., (2001) Protein Eng, 14, 1.
-
(2001)
Protein Eng.
, vol.14
, pp. 1
-
-
Tama, F.1
Sanejouand, Y.H.2
-
22
-
-
0034308140
-
-
Tama, F., Gadea, F. X., Marques, O., and Sanejouand, Y. H., (2000) Proteins, 41, 1.
-
(2000)
Proteins
, vol.41
, pp. 1
-
-
Tama, F.1
Gadea, F.X.2
Marques, O.3
Sanejouand, Y.H.4
-
23
-
-
0032533790
-
-
Hinsen, K., (1998) Proteins, 33, 417.
-
(1998)
Proteins
, vol.33
, pp. 417
-
-
Hinsen, K.1
-
24
-
-
0036307741
-
-
Tama, F., and Brooks III, C. L., (2002) J. Mol. Biol., 318, 733.
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 733
-
-
Tama, F.1
Brooks III, C.L.2
-
25
-
-
0042424707
-
-
Tama, F., Valle, M., Frank, J., and Brooks, C. L., III, (2003) Proc Natl Acad Sci USA, 100, 9319.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 9319
-
-
Tama, F.1
Valle, M.2
Frank, J.3
Brooks III, C.L.4
-
26
-
-
0037173062
-
-
Ming, D., Kong, Y., Lambert, M., Huang, Z., and Ma, J., (2002) Proc. Natl. Acad. Sci. USA, 99, 8620.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8620
-
-
Ming, D.1
Kong, Y.2
Lambert, M.3
Huang, Z.4
Ma, J.5
-
27
-
-
0036382958
-
-
Tama, F., Wriggers, W., and Brooks, C. L., (2002) J Mol Biol, 321, 297.
-
(2002)
J. Mol. Biol.
, vol.321
, pp. 297
-
-
Tama, F.1
Wriggers, W.2
Brooks, C.L.3
-
29
-
-
0027632248
-
-
Martinetz, T. M., Berkovich, S. G., and Schulten, K. J., (1993) IEEE Trans. Neural Networks, 4, 558.
-
(1993)
IEEE Trans. Neural Networks
, vol.4
, pp. 558
-
-
Martinetz, T.M.1
Berkovich, S.G.2
Schulten, K.J.3
-
30
-
-
0022148098
-
-
Makhoul, J., Roucos, S., and Gish, H., (1985) Proc. IEEE, 73, 1551.
-
(1985)
Proc. IEEE
, vol.73
, pp. 1551
-
-
Makhoul, J.1
Roucos, S.2
Gish, H.3
-
31
-
-
0037062479
-
-
Ming, D., Kong, Y., Wakil, S. J., Brink, J., and Ma, J., (2002) Proc. Natl. Acad. Sci. USA, 99, 7895.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7895
-
-
Ming, D.1
Kong, Y.2
Wakil, S.J.3
Brink, J.4
Ma, J.5
-
32
-
-
0037666985
-
-
Kong, Y., Ming, D., Wu, Y., Stoops, J. K., Zhou, Z. H., and Ma, J., (2003) J. Mol. Biol., 330, 129.
-
(2003)
J. Mol. Biol.
, vol.330
, pp. 129
-
-
Kong, Y.1
Ming, D.2
Wu, Y.3
Stoops, J.K.4
Zhou, Z.H.5
Ma, J.6
-
33
-
-
0344091553
-
-
Beuron, F., Flynn, T. C., Ma, J., Kondo, H., Zhang, X., and Freemont, P. S., (2003) J. Mol. Biol., 327, 619.
-
(2003)
J. Mol. Biol.
, vol.327
, pp. 619
-
-
Beuron, F.1
Flynn, T.C.2
Ma, J.3
Kondo, H.4
Zhang, X.5
Freemont, P.S.6
-
34
-
-
0037436340
-
-
Chacon, P., Tama, F., and Wriggers, W., (2003) J Mol Biol, 326, 485.
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 485
-
-
Chacon, P.1
Tama, F.2
Wriggers, W.3
-
35
-
-
0037039425
-
-
Brink, J., Ludtke, S. J., Yang, C. Y., Gu, Z. W., Wakil, S. J., and Chiu, W., (2002) Proc Natl Acad Sci U S A, 99, 138.
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 138
-
-
Brink, J.1
Ludtke, S.J.2
Yang, C.Y.3
Gu, Z.W.4
Wakil, S.J.5
Chiu, W.6
-
36
-
-
1642305246
-
-
In Press
-
Brink, J., Ludtke, S., Kong, Y., Wakil, S. J., Ma, J., and Chiu, W., (2004) Structure, In Press.
-
(2004)
Structure
-
-
Brink, J.1
Ludtke, S.2
Kong, Y.3
Wakil, S.J.4
Ma, J.5
Chiu, W.6
-
37
-
-
0025173665
-
-
Gros, P., van Gunsteren, W. F., and Hol, W. G., (1990) Science. 249, 1149.
-
(1990)
Science
, vol.249
, pp. 1149
-
-
Gros, P.1
van Gunsteren, W.F.2
Hol, W.G.3
-
39
-
-
0037422581
-
-
Ming, D., Kong, Y., Wu, Y., and Ma, J., (2003) Proc. Nalt. Acad. Sci. USA, 100, 104.
-
(2003)
Proc. Nalt. Acad. Sci. USA
, vol.100
, pp. 104
-
-
Ming, D.1
Kong, Y.2
Wu, Y.3
Ma, J.4
-
41
-
-
0037636333
-
-
Ming, D., Kong, Y., Wu, Y., and Ma, J., (2003) Biophys J, 85, 27.
-
(2003)
Biophys. J.
, vol.85
, pp. 27
-
-
Ming, D.1
Kong, Y.2
Wu, Y.3
Ma, J.4
-
42
-
-
0346057937
-
-
Wu, Y., and Ma, J., Biophys. J., (2004), 86, 116-124.
-
(2004)
Biophys. J.
, vol.86
, pp. 116-124
-
-
Wu, Y.1
Ma, J.2
-
43
-
-
0036840202
-
-
Li, G., and Cui, Q., (2002) Biophys J, 83, 2457.
-
(2002)
Biophys. J.
, vol.83
, pp. 2457
-
-
Li, G.1
Cui, Q.2
-
44
-
-
0022780988
-
-
Bruccoleri, R. E., Karplus, M., and McCammon, J. A., (1986) Biopolymers, 25, 1767.
-
(1986)
Biopolymers
, vol.25
, pp. 1767
-
-
Bruccoleri, R.E.1
Karplus, M.2
McCammon, J.A.3
-
45
-
-
0037417786
-
-
Yang, W., Gao, Y. Q., Cui, Q., Ma, J., and Karplus, M., (2003) Proc Natl Acad Sci U S A, 100, 874.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 874
-
-
Yang, W.1
Gao, Y.Q.2
Cui, Q.3
Ma, J.4
Karplus, M.5
-
46
-
-
0036073866
-
-
Ma, J., Flynn, T. C., Cui, Q., Leslie, A., Walker, J. E., and Karplus, M., A (2002) Structure, 10, 921.
-
(2002)
Structure
, vol.10
, pp. 921
-
-
Ma, J.1
Flynn, T.C.2
Cui, Q.3
Leslie, A.4
Walker, J.E.5
Karplus, M.A.6
-
47
-
-
0023682107
-
-
Cusack, S., Smith, J., Finney, J., Tidor, B., and Karplus, M., (1988) J Mol Biol, 202, 903.
-
(1988)
J. Mol. Biol.
, vol.202
, pp. 903
-
-
Cusack, S.1
Smith, J.2
Finney, J.3
Tidor, B.4
Karplus, M.5
-
48
-
-
0000658538
-
-
Lamm, G., and Szabo, A., (1986) J. Chem. Phys., 85, 7334.
-
(1986)
J. Chem. Phys.
, vol.85
, pp. 7334
-
-
Lamm, G.1
Szabo, A.2
-
49
-
-
0025292904
-
-
Kottalam, J., and Case, D. A., (1990) Biopolymers, 29, 1409.
-
(1990)
Biopolymers
, vol.29
, pp. 1409
-
-
Kottalam, J.1
Case, D.A.2
-
51
-
-
0037436405
-
-
Emberly, E. G., Mukhopadhyay, R., Wingreen, N. S., and Tang, C., (2003) J Mol Biol, 327, 229.
-
(2003)
J. Mol. Biol.
, vol.327
, pp. 229
-
-
Emberly, E.G.1
Mukhopadhyay, R.2
Wingreen, N.S.3
Tang, C.4
-
52
-
-
0028961335
-
-
Murzin, A. G., Brenner, S. E., Hubbard, T., and Chothia, C., (1995) J. Mol. Biol., 247, 536.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 536
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
|