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Volumn 83, Issue 4, 2004, Pages 541-549

Confirming microarray data - Is it really necessary?

Author keywords

[No Author keywords available]

Indexed keywords

CROSS HYBRIDIZATION; DNA MICROARRAY; EXPERIMENTATION; GENE AMPLIFICATION; GENE EXPRESSION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; GENOMICS; HUMAN; METHODOLOGY; MOLECULAR CLONING; NONHUMAN; POLICY; PRACTICE GUIDELINE; PRIORITY JOURNAL; PUBLICATION; QUALITY CONTROL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; REVIEW; RNA SPLICING; SCIENTIFIC LITERATURE; STANDARD;

EID: 1542613788     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ygeno.2003.09.017     Document Type: Article
Times cited : (70)

References (42)
  • 2
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • Schena M., Shalon D., Davis R.W., Brown P.O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science. 270:1995;467-470.
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 3
    • 0022372670 scopus 로고
    • Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia
    • Saiki R.K.et al. Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science. 230:1985;1350-1354.
    • (1985) Science , vol.230 , pp. 1350-1354
    • Saiki, R.K.1
  • 4
    • 0037561920 scopus 로고    scopus 로고
    • Characterization of a novel coronavirus associated with severe acute respiratory syndrome
    • Rota P.A.et al. Characterization of a novel coronavirus associated with severe acute respiratory syndrome. Science. 300:2003;1394-1399.
    • (2003) Science , vol.300 , pp. 1394-1399
    • Rota, P.A.1
  • 5
    • 0033569406 scopus 로고    scopus 로고
    • Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
    • Golub T.R.et al. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science. 286:1999;531-537.
    • (1999) Science , vol.286 , pp. 531-537
    • Golub, T.R.1
  • 6
    • 0034518116 scopus 로고    scopus 로고
    • Toxicogenomics-based discrimination of toxic mechanism in HepG2 human hepatoma cells
    • Burczynski M.E.et al. Toxicogenomics-based discrimination of toxic mechanism in HepG2 human hepatoma cells. Toxicol. Sci. 58:2000;399-415.
    • (2000) Toxicol. Sci. , vol.58 , pp. 399-415
    • Burczynski, M.E.1
  • 7
    • 0142128826 scopus 로고    scopus 로고
    • Gene expression analysis reveals chemical-specific profiles
    • Hamadeh H.K.et al. Gene expression analysis reveals chemical-specific profiles. Toxicol. Sci. 67:2002;219-231.
    • (2002) Toxicol. Sci. , vol.67 , pp. 219-231
    • Hamadeh, H.K.1
  • 8
    • 0035213686 scopus 로고    scopus 로고
    • Identification of toxicologically predictive gene sets using cDNA microarrays
    • Thomas R.S.et al. Identification of toxicologically predictive gene sets using cDNA microarrays. Mol. Pharmacol. 60:2001;1189-1194.
    • (2001) Mol. Pharmacol. , vol.60 , pp. 1189-1194
    • Thomas, R.S.1
  • 9
    • 0035866003 scopus 로고    scopus 로고
    • CDNA microarray gene expression analysis of B-cell chronic lymphocytic leukemia proposes potential new prognostic markers involved in lymphocyte trafficking
    • Stratowa C.et al. cDNA microarray gene expression analysis of B-cell chronic lymphocytic leukemia proposes potential new prognostic markers involved in lymphocyte trafficking. Int. J. Cancer. 91:2001;474-480.
    • (2001) Int. J. Cancer , vol.91 , pp. 474-480
    • Stratowa, C.1
  • 10
    • 0035205029 scopus 로고    scopus 로고
    • Blood genomic responses differ after stroke, seizures, hypoglycemia, and hypoxia: Blood genomic fingerprints of disease
    • Tang Y., Lu A., Aronow B.J., Sharp F.R. Blood genomic responses differ after stroke, seizures, hypoglycemia, and hypoxia: blood genomic fingerprints of disease. Ann. Neurol. 50:2001;699-707.
    • (2001) Ann. Neurol. , vol.50 , pp. 699-707
    • Tang, Y.1    Lu, A.2    Aronow, B.J.3    Sharp, F.R.4
  • 11
    • 0347789214 scopus 로고    scopus 로고
    • Gene expression biomarkers that accurately predict kidney tubular necrosis
    • Kier L., Nolan T. Gene expression biomarkers that accurately predict kidney tubular necrosis. Toxicol. Sci. 72(S-1):2003;151.
    • (2003) Toxicol. Sci. , vol.72 , Issue.S-1 , pp. 151
    • Kier, L.1    Nolan, T.2
  • 12
    • 0036670954 scopus 로고    scopus 로고
    • Prediction of sensitivity to STI571 among chronic myeloid leukemia patients by genome-wide cDNA microarray analysis
    • Kaneta Y.et al. Prediction of sensitivity to STI571 among chronic myeloid leukemia patients by genome-wide cDNA microarray analysis. Jpn. J. Cancer Res. 93:2002;849-856.
    • (2002) Jpn. J. Cancer Res. , vol.93 , pp. 849-856
    • Kaneta, Y.1
  • 13
    • 0038244058 scopus 로고    scopus 로고
    • Gene expression predictors of breast cancer outcomes
    • Huang E.et al. Gene expression predictors of breast cancer outcomes. Lancet. 361:2003;1590-1596.
    • (2003) Lancet , vol.361 , pp. 1590-1596
    • Huang, E.1
  • 14
    • 0035821652 scopus 로고    scopus 로고
    • DNA microarray analysis of genes involved in p53 mediated apoptosis: Activation of Apaf-1
    • Kannan K., Kaminski N., Rechavi G., Jakob-Hirsch J., Amariglio N., Givol D. DNA microarray analysis of genes involved in p53 mediated apoptosis: activation of Apaf-1. Oncogene. 20:2001;3449-3455.
    • (2001) Oncogene , vol.20 , pp. 3449-3455
    • Kannan, K.1    Kaminski, N.2    Rechavi, G.3    Jakob-Hirsch, J.4    Amariglio, N.5    Givol, D.6
  • 16
    • 1542430720 scopus 로고    scopus 로고
    • MGED, Microarray Gene Expression Data Society - MGED Society
    • MGED, Microarray Gene Expression Data Society - MGED Society, accessed September 10, 2003, at http://www.mged.org/.
  • 19
    • 29144464381 scopus 로고    scopus 로고
    • ArrayExpress, accessed June 9, 2003, at http://www.ebi.ac.uk/microarray/ ArrayExpress/arrayexpress.html.
    • ArrayExpress
  • 20
    • 1542745681 scopus 로고    scopus 로고
    • DDBJ, DNA Data Bank of Japan
    • DDBJ, DNA Data Bank of Japan, accessed September 10, 2003, at http://www.ddbj.nig.ac.jp/.
  • 22
    • 1542535538 scopus 로고    scopus 로고
    • GenBank, accessed September 10, 2003, at http://www.ncbi.nlm.nih.gov/ Genbank/index.html.
    • GenBank
  • 25
    • 0012845338 scopus 로고    scopus 로고
    • Use of genomics in mechanism based risk assessment
    • T. Inoue, & W.D. Pennie. Tokyo: Springer-Verlag
    • Robinson D.E., Petit S.D., Morgan D.G. Use of genomics in mechanism based risk assessment. Inoue T., Pennie W.D. Toxicogenomics. 2003;194-203 Springer-Verlag, Tokyo.
    • (2003) Toxicogenomics , pp. 194-203
    • Robinson, D.E.1    Petit, S.D.2    Morgan, D.G.3
  • 26
    • 0036337915 scopus 로고    scopus 로고
    • A genomic view of alternative splicing
    • Modrek B., Lee C. A genomic view of alternative splicing. Nat. Genet. 30:2002;13-19.
    • (2002) Nat. Genet. , vol.30 , pp. 13-19
    • Modrek, B.1    Lee, C.2
  • 27
    • 0036655060 scopus 로고    scopus 로고
    • Alternative and aberrant splicing of MDM2 mRNA in human cancer
    • Bartel F., Taubert H., Harris L.C. Alternative and aberrant splicing of MDM2 mRNA in human cancer. Cancer Cell. 2:2002;9-15.
    • (2002) Cancer Cell , vol.2 , pp. 9-15
    • Bartel, F.1    Taubert, H.2    Harris, L.C.3
  • 28
    • 0037458085 scopus 로고    scopus 로고
    • Microarrays: The use of oligonucleotides and cDNA for the analysis of gene expression
    • Barrett J.C., Kawasaki E.S. Microarrays: the use of oligonucleotides and cDNA for the analysis of gene expression. Drug Discovery Today. 8:2003;134-141.
    • (2003) Drug Discovery Today , vol.8 , pp. 134-141
    • Barrett, J.C.1    Kawasaki, E.S.2
  • 29
    • 0035863927 scopus 로고    scopus 로고
    • Assessment of clone identity and sequence fidelity for 1189 IMAGE cDNA clones
    • Halgren R.G., Fielden M.R., Fong C.J., Zacharewski T.R. Assessment of clone identity and sequence fidelity for 1189 IMAGE cDNA clones. Nucleic Acids Res. 29:2001;582-588.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 582-588
    • Halgren, R.G.1    Fielden, M.R.2    Fong, C.J.3    Zacharewski, T.R.4
  • 30
    • 0034947878 scopus 로고    scopus 로고
    • Sequence verification as quality-control step for production of cDNA microarrays
    • Taylor E.et al. Sequence verification as quality-control step for production of cDNA microarrays. Biotechniques. 31:2001;62-65.
    • (2001) Biotechniques , vol.31 , pp. 62-65
    • Taylor, E.1
  • 31
    • 0035912171 scopus 로고    scopus 로고
    • When the chips are down
    • Knight J. When the chips are down. Nature. 410:2001;460-461.
    • (2001) Nature , vol.410 , pp. 460-461
    • Knight, J.1
  • 32
    • 0242600262 scopus 로고    scopus 로고
    • Microarrays: Hazardous to your science
    • Goodman N. Microarrays: hazardous to your science. Genome Technol. April. 2003;42-45.
    • (2003) Genome Technol. April , pp. 42-45
    • Goodman, N.1
  • 33
    • 0036211063 scopus 로고    scopus 로고
    • Analysis of matched mRNA measurements from two different microarray technologies
    • Kuo W.P., Jenssen T.K., Butte A.J., Ohno-Machado L., Kohane I.S. Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics. 18:2002;405-412.
    • (2002) Bioinformatics , vol.18 , pp. 405-412
    • Kuo, W.P.1    Jenssen, T.K.2    Butte, A.J.3    Ohno-Machado, L.4    Kohane, I.S.5
  • 34
    • 0037446177 scopus 로고    scopus 로고
    • To confirm or not to confirm (microarray data) - That, is the question
    • Rockett J.C. To confirm or not to confirm (microarray data) - that, is the question. Drug Discovery Today. 8:2003;343.
    • (2003) Drug Discovery Today , vol.8 , pp. 343
    • Rockett, J.C.1
  • 35
    • 17044450862 scopus 로고    scopus 로고
    • Development of a prostate cDNA microarray and statistical gene expression analysis package
    • Carlisle A.J.et al. Development of a prostate cDNA microarray and statistical gene expression analysis package. Mol. Carcinog. 28:2000;12-22.
    • (2000) Mol. Carcinog. , vol.28 , pp. 12-22
    • Carlisle, A.J.1
  • 36
    • 14844364789 scopus 로고    scopus 로고
    • Post-analysis follow-up and validation of microarray experiments
    • Chuaqui R.F.et al. Post-analysis follow-up and validation of microarray experiments. Nat. Genet. 32:2002;509-514.
    • (2002) Nat. Genet. , vol.32 , pp. 509-514
    • Chuaqui, R.F.1
  • 37
    • 85085674557 scopus 로고    scopus 로고
    • Circulation research: suitability criteria for manuscripts utilizing genomics array technology. Circ. Res. 89:2001;469.
    • (2001) Circ. Res. , vol.89 , pp. 469
  • 38
    • 0036228716 scopus 로고    scopus 로고
    • DNA microarrays: Boundless technology or bound by technology? Guidelines for studies using microarray technology
    • Firestein G.S., Pisetsky D.S. DNA microarrays: boundless technology or bound by technology? Guidelines for studies using microarray technology. Arthritis Rheum. 46:2002;859-861.
    • (2002) Arthritis Rheum. , vol.46 , pp. 859-861
    • Firestein, G.S.1    Pisetsky, D.S.2
  • 39
    • 0037462931 scopus 로고    scopus 로고
    • A faithful method for PCR-mediated global mRNA amplification and its integration into microarray analysis on laser-captured cells
    • Aoyagi K.et al. A faithful method for PCR-mediated global mRNA amplification and its integration into microarray analysis on laser-captured cells. Biochem. Biophys. Res. Commun. 300:2003;915-920.
    • (2003) Biochem. Biophys. Res. Commun. , vol.300 , pp. 915-920
    • Aoyagi, K.1
  • 40
    • 0036713497 scopus 로고    scopus 로고
    • Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA
    • Iscove N.N., Barbara M., Gu M., Gibson M., Modi C., Winegarden N. Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA. Nat. Biotechnol. 20:2002;940-943.
    • (2002) Nat. Biotechnol. , vol.20 , pp. 940-943
    • Iscove, N.N.1    Barbara, M.2    Gu, M.3    Gibson, M.4    Modi, C.5    Winegarden, N.6
  • 41
    • 84871012277 scopus 로고    scopus 로고
    • Applied Biosystems, accessed June 18, 2003, at http://events-na. appliedbiosystems.com/mk/get/0905_ALLGENE_LANDING?isource = From www.allgenes.com.
    • Applied Biosystems
  • 42
    • 0037255214 scopus 로고    scopus 로고
    • Systems toxicology and the Chemical Effects in Biological Systems (CEBS) knowledge base
    • Waters M.et al. Systems toxicology and the Chemical Effects in Biological Systems (CEBS) knowledge base. EHP Toxicogenomics. 111(1T):2003;15-28.
    • (2003) EHP Toxicogenomics , vol.111 , Issue.1 T , pp. 15-28
    • Waters, M.1


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