Cytometry and Plant Sciences: A Personal Retrospective

Cytometry Part A

Volumn 58, Issue 1, 2004, Pages 37-44

  Galbraith, David W ^a  

^a UNIVERSITY OF ARIZONA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FLUOROCHROME; MACROGOL;

ANGIOSPERM; CELL CULTURE; CELL SELECTION; CELL WALL; CYTOMETRY; FLOW CYTOMETRY; FLUORESCENCE ACTIVATED CELL SORTING; GYMNOSPERM; NONHUMAN; PLANT; PLANT CELL; PRIORITY JOURNAL; PROTOPLAST; REVIEW; SPECIES DIFFERENCE; TRANSGENE;

EID: 1542514872     PISSN: 15524922     EISSN: None     Source Type: Journal    
DOI: 10.1002/cyto.a.10100     Document Type: Review

References (106)

1. Galbraith DW. Flow cytometry and cell sorting: applications to higher plant systems. Int Rev Cytol 1989;116:165-227.
2. a. Heller FO. DNS-bestimmung an keimwurzeln von Vicia faba L. mit hilfe der impulscytophotometrie. Ber Deutsch Bot ges Bd 1973;86: S437-S441.
3. Dittrich W, Gohde W. Impulse fluorometry in single cells in suspensions. Z Naturforsch C 1969;B24:360-361.
4. Kao KN, Michayluk MR. Method for high-frequency intergeneric fusion of plant protoplasts. Planta 1974;115:355-367.
5. Keller PM, Person S, Snipes W. A fluorescence enhancement assay of cell fusion. J Cell Sci 1977;28:167-177.
6. Galbraith DW, Galbraith JEC. A method for the identification of fusion of plant protoplasts derived from tissue cultures. Z Pflanzen 1979;93:149-158.
7. Galbraith DW, Mauch TJ. Identification of fusion of plant protoplasts II. Z Pflanzen 1980;98:129-140.
8. Galbraith DW. Identification and sorting of plant heterokaryons. Patent 4,300,310. Washington, DC: US Department of Commerce; 1981.
9. Galbraith DW, Harkins KR. Cell sorting as a means for isolating somatic hybrids. In: Fujiwara A, editor. Plant tissue culture 1982. Tokyo: Maruzen Press; 1982. p 617-618.
10. Galbraith DW, Mauch TJ, Shields BA. Analysis of the initial stages of plant protoplast development using 33258 Hoechst: reactivation of the cell cycle. Physiol Plant 1981;51:380-386.
11. Krishan A. Rapid flow cytofluorimetric analysis of mammalian-cell cycle by propidium iodide staining. J Cell Biol 1975;66:188-193.
12. Christensen IJ, Hartmann NR, Keiding N, Larsen JK, Noer H, Vindeløv LL. In: Lutz D, editor. Pulse cytophotometry, part III. Ghent: European Press Medicon; 1978. p 71-78.
13. Galbraith DW, Shields BA. The effects of inhibitors of cell wall synthesis on tobacco protoplast development. Physiol Plant 1982;55:25-30.
14. Galbraith DW, Harkins KR, Maddox JR, Ayres NM, Sharma DP, Firoozabady E. Rapid flow cytometric analysis of the cell cycle in intact plant tissues. Science 1983;220:1049-1051.
15. Sharma DP, Firoozabady E, Ayres NM, Galbraith DW. Improvement of anther culture in Nicotiana: media, culture conditions and flow cytometric determination of ploidy levels. Z Pflanzen 1983;111:441-450.
16. Keeler KH, Kwankin B, Barnes PW, Galbraith DW. Polyploid polymorphism in big bluestem (Andropogon gerardii Vitman). Genome 1987;29:374-379.
17. Bharathan G, Lambert GM, Galbraith DW. Nuclear DNA contents of monocotyledons and related taxa. Am J Botany 1994;81:381-386.
18. Galbraith DW, Bartos J, Dolezel J. Flow cytometry and cell sorting in plant biotechnology. In: Sklar LA, editor. Flow cytometry in biotechnology. Oxford: Oxford University Press; 2004. Forthcoming.
19. Bergounioux C, Perennes C, Miege C, Gadal P. The effect of male-sterility on protoplast division in Petunia hybrida-cell-cycle comparison by flow cytometry. Protoplasma 1986;130:138-144.
20. Sgorbati S, Levi M, Sparvole E, Trezzi F, Lucchini G. Cytometry and flow cytometry of 4′,6-diamidino-2-phenylindole (DAPI)-stained suspensions of nuclei released from fresh and fixed tissues of plants. Physiol Plant 1986;68:471-476.
21. Bergounioux C, Brown SC, Petit PX. Flow cytometry and plant protoplast cell biology. Physiol Plant 1992;85:374-386.
22. DeRocher EJ, Harkins KR, Galbraith DW, Bohnert HJ. Developmentally-regulated systemic endopolyploidy in succulents with small genomes. Science 1990;250:99-101.
23. Galbraith DW, Harkins KR, Knapp S. Systemic endopolyploidy in Arabidopsis thaliana. Plant Physiol 1991;96:985-989.
24. Kowles RV, Srienc F, Phillips RL. Endoreduplication of nuclear DNA in the developing maize endosperm. Dev Genet 1990;11:125-132.
25. Kowles RV, McMullem MD, Yerk G, Phillips RL, Kraemer S, Srienc F. Endosperm mitotic activity and endoreduplication in maize affected by defective kernel mutations. Genome 1992;35:68-77.
26. Kowles RV, Yerk G, Haas KM, Phillips RL. Maternal effects influencing DNA endoreduplication in developing endosperm in developing endosperm of Zea mays. Genome 1997;40:798-805.
27. Arumuganathan K, Earle ED. Nuclear DNA content of some important plant species. Plant Mol Biol Rep 1991;9:208-218.
28. Blondon F, Marie D, Brown S, Kondorosi A. Genome size and base composition in Medicago sativa and Medicago truncatula species. Genome 1994;37:264-270.
29. Cerbah M, Mortreau E, Brown S, Siljak-Yakovlev S, Bertrand H, Lambert C. Genome size variation and species relationships in the genus Hydrangea. Theor Appl Genet 2001;103:45-51.
30. Martel E, DeNay D, Siljak Yakovlev S, Brown S, Sarr A. Genome size variation and basic chromosome number in pearl millet and fourteen related Pennisetum species. J Hered 1997;88:139-143.
31. Anderson LK, Stack SM, Fox MH, Zhang CS. The relationship between genome size and synaptonemal complex length in higher plants. Exp Cell Res 1985;156:367-378.
32. Dolezel J, Gohde W. Sex determination in dioecious plants Melandrium album and M. rubrum using high-resolution flow cytometry. Cytometry 1995;19:103-106.
33. Johnston JS, Bennett MD, Rayburn AL, Galbraith DW, Price HJ. Reference standards for determination of DNA content of plant nuclei. Am J Botany 1999;86:609-613.
34. Godelle B, Cartier D, Marie D, Brown SC, Siljakyakovlev S. Heterochromatin study demonstrating the nonlinearity of fluorometry useful for calculating genomic base composition. Cytometry 1993;14:618-626.
35. Marie D, Brown SC. A cytometric exercise in plant DNA histograms, with 2C values for 70 species. Biol Cell 1993;78:41-51
36. Bergounioux C, Perennes C, Brown S, Gadal P. Nuclear RNA quantification in protoplast cell-cycle phases. Cytometry 1988;9:84-87.
37. Bergounioux C, Perennes C, Brown SC, Sarda C, and Gadal P. Relation between protoplast division, cell-cycle stage and nuclear chromatin structure. Protoplasma 1988;142:127-136.
38. Segers G, Gadisseur I, Bergounioux C, Engler JD, Jacqmard A, Van-Montagu M, Inze D. The Arabidopsis cyclin-dependent kinase gene cdc2bAt is preferentially expressed during S and G(2) phases of the cell cycle. Plant J 1996;10:601-612.
39. Perennes C, Qin LX, Glab N, Bergounioux C. Petunia P34 (CDC2) protein-kinase activity in G(2)M cells obtained with a reversible cell-cycle inhibitor, mimosine. FEBS Lett 1993;333:141-145.
40. Trehin C, Planchais S, Glab N, Perennes C, Tregear J, Bergounioux C. Cell cycle regulation by plant growth regulators: involvement of auxin and cytokinin in the re-entry of Petunia protoplasts into the cell cycle. Planta 1998;206:215-224.
41. De Laat AMM, Blaas J. Flow-cytometric characterization and sorting of plant chromosomes. Theor Appl Genet 1984;67:463-467.
42. Veuskens J, Marie D, Brown SC, Jacobs M, Negrutiu I. Flow sorting of the Y sex-chromosome in the dioecious plant Melandrium album. Cytometry 1995;21:363-373.
43. Conia J, Bergounioux C, Perennes C, Muller P, Brown S, Gadal P. Flow cytometric analysis and sorting of plant chromosomes from Petunia hybrida protoplasts. Cytometry 1987;8:500-508.
44. Conia J, Muller P, Brown S, Bergounioux C, Gadal P. Monoparametric models of flow cytometric karyotypes with spreadsheet software. Theor Appl Genet 1989;77:295-303.
45. Arumuganathan K, Slattery JP, Tanksley SD, Earle ED. Preparation and flow cytometric analysis of metaphase chromosomes of tomato. Theor Appl Genet 1991;82:101-111.
46. Lee JH, Arumuganathan K, Kaeppler SM, Kaeppler HF, Papa CM. Cell synchronization and isolation of metaphase chromosomes from maize (Zea mays L) root tips for flow cytometric analysis and sorting. Genome 1996;39:697-703.
47. Schwarzacher T, Wang ML, Leitch AR, Miller N, Moore G, Heslop-Harrison JS. Flow cytometric analysis of the chromosomes and stability of a wheat cell-culture line. Theor Appl Genet 1997;94:91-97.
48. Dolezel J, Lucretti S. High-resolution flow karyotyping and chromosome sorting in Vicia faba lines with standard and reconstructed karyotypes. Theor Appl Genet 1995;90:797-802.
49. Dolezel J, Cihalikova J, Lucretti S. A high-yield procedure for isolation of metaphase chromosomes from root-tips of Vicia faba L. Planta 1992;188:93-98.
50. Gualberti G, Dolezel J, Macas J, Lucretti S. Preparation of pea (Pisum sativum L) chromosome and nucleus suspensions from single root tips. Theor Appl Genet 1996;92:744-751.
51. Kubalakova M, Vrana J, Cihalikova J, Simkova H, Dolezel J. Flow karyotyping and chromosome sorting in bread wheat (Triticum aestivum L.). Theor Appl Genet 2002;104:1362-1372.
52. Lucretti S, Dolezel J, Schubert I, Fuchs J. Flow karyotyping and sorting of Vicia faba chromosomes. Theor Appl Genet 1993;85:665-672.
53. Lysak MA, Cihalikova J, Kubalakova M, Simkova H, Kunzel G, Dolezel J. Flow karyotyping and sorting of mitotic chromosomes of barley (Hordeum vulgare L.). Chromosome Res 1999;7:431-444.
54. Macas J, Gualberti G, Nouzova M, Samec P, Lucretti S, Dolezel J. Construction of chromosome-specific DNA libraries covering the whole genome of field bean (Vicia faba L). Chromosome Res 1996;4:531-539.
55. Neumann P, Pozarkova D, Vrana J, Dolezel J, Macas J. Chromosome sorting and PCR-based physical mapping in pea (Pisum sativum L.). Chromosome Res 2002;10:63-71.
56. Vlacilova K, Ohri D, Vrana J, Cihalikova J, Kubalakova M, Kahl G, Dolezel J. Development of flow cytogenetics and physical genome mapping in chickpea (Cicer arietinum L.). Chromosome Res 2002;10:695-706.
57. Pich U, Meister A, Macas J, Dolezel J, Lucretti S, Schubert I. Primed in situ labeling facilitates flow sorting of similar sized chromosomes. Plant J 1995;7:1039-1044.
58. Kejnovsky E, Vrana J, Matsunaga S, Soucek P, Siroky J, Dolezel J, Vyskot B. Localization of male-specifically expressed MROS genes of Silene latifolia by PCR on flow-sorted sex chromosomes and autosomes. Genetics 2001;158:1269-1277.
59. Simkova H, Cihalikova J, Vrana J, Lysak MA, Dolezel J. Preparation of HMW DNA from plant nuclei and chromosomes isolated from root tips. Biol Plant 2003;46:369-373.
60. Galbraith DW. Large particle sorting. In: Radbruch A, editor. Flow cytometry and cell sorting. Berlin: Springer-Verlag; 1992. p 189-204.
61. Galbraith DW, Lucretti S. Large particle sorting. In: Radbruch A, editor. Flow cytometry, and cell sorting. 2nd ed. Berlin: Springer-Verlag; 2000. p 293-317.
62. Harkins KR, Galbraith DW. Factors governing the flow cytometric analysis and sorting of large biological particles. Cytometry 1987;8:60-71.
63. Galbraith DW, Afonso CL, Harkins KR. Flow sorting and culture of protoplasts: Conditions for high-frequency recovery and growth of sorted protoplasts of suspension cultures of Nicotiana. Plant Cell Rep 1984;3:151-155.
64. Harkins KR, Galbraith DW. Flow sorting and culture of plant protoplasts. Physiol Plant 1984;60:43-52.
65. Freyer JP, Fillak D, Jett JH. Use of xanthan gum to suspend large particles during flow cytometric analysis and sorting. Cytometry 1989;10:803-806.
66. Afonso CL, Harkins KR, Thomas-Compton M, Krejci A, Galbraith DW. Production of somatic hybrid plants through fluorescence-activated sorting of protoplasts. Biotechnology 1985;3:811-816.
67. Alexander RG, Cocking EC, Jackson PJ, Jett JH. The characterization and isolation of plant heterokaryons by flow cytometry. Protoplasma 1985;128:52-58.
68. Hammatt N, Lister A, Blackhall NW, Gartland J, Ghose TK, Gilmour DM, Power JB, Davey MR, Cocking EC. Selection of plant heterokaryons from diverse origins by flow cytometry. Protoplasma 1990;154:34-44.
69. Waara S, Glimelius K. The potential of somatic hybridization in crop breeding. Euphytica 1995;85:217-233.
70. Galbraith DW, Harkins KR, Jefferson RA. Flow cytometric characterization of the chlorophyll contents and size distributions of plant protoplasts. Cytometry 1988;9:75-83.
71. Harkins KR, Jefferson RA, Kavanagh TA, Bevan MW, Galbraith DW. Expression of photosynthesis-related gene fusions is restricted by cell-type in transgenic plants and in transfected protoplasts. Proc Natl Acad Sci USA 1990;87:816-820.
72. O'Brien IEW, Baguley BC, Murray BG, Morris BAM, Ferguson IB. Early stages of the apoptotic pathway in plant cells are reversible. Plant J 1998;13:803-814.
73. Weir IE, Pham NA, Hedley DW. Oxidative stress is generated via the mitochondrial respiratory chain during plant cell apoptosis. Cytometry 2003;54A:109-117.
74. Brown S, Renaudin JP, Prevot C, Guern J. Flow cytometry and sorting of plant protoplasts - technical problems and physiological results from a study of pH and alkaloids in Catharanthus roseus. Physiol Veg 1984;22:541-554.
75. Renaudin JP, Brown SS, Barbier-Brygoo H, Guern J. Quantitative characterization of protoplasts and vacuoles from suspension-cultured cells of Catharanthus roseus. Physiol Plant 1986;68:695-703.
76. Gantet P, Hubac C, Brown SC. Flow cytometric fluorescence anisotropy of lipophilic probes in epidermal and mesophyll protoplasts from water-stressed Lupinus albus L. Plant Physiol 1990;94:729-737.
77. Meyer DJ, Afonso CL, Galbraith DW. Isolation and characterization of monoclonal antibodies directed against plant plasma membrane and cell wall epitopes: Identification of a monoclonal antibody that recognizes extensin and analysis of the process of epitope biosynthesis in plant tissues and cell cultures. J Cell Biol 1988;107:163-175.
78. Galbraith DW, Zeiher CA, Harkins KR, Afonso CL. Biosynthesis, processing and targeting of the G-protein of vesicular stomatitis virus in tobacco protoplasts. Planta 1992;186:324-336.
79. Galbraith DW, Grebenok RJ, Lambert GM, Sheen J. Flow cytometric analysis of transgene expression in higher plants: green fluorescent protein. Methods Cell Biol 1995;50:3-12.
80. Sheen J, Hwang S, Niwa Y, Kobayashi H, Galbraith DW. Green fluorescent protein as a new vital marker in plant cells. Plant J 1995;8:777-784.
81. a. Birnbaum K, Shasha DE, Wang JY, Jung JW, Lambert GM, Galbraith DW, Benfey PN. A gene expression map of the Arabidopsis root. Science 2003;302:1956-1960.
82. Galbraith DW. Global analysis of cell type-specific gene expression. Comp Funct Genomics 2003;4:208-215.
83. Ashcroft RG, Preston C, Cleland RE, Critchley C. Flow cytometry of isolated chloroplasts and thylakoids. Photobiochem Photobiophys 1986;13:1-14.
84. Schroeder WP, Petit PX. Flow cytometry of spinach chloroplasts: determination of intactness and lectin-binding properties of the envelope and the thylakoid membranes. Plant Physiol 1992;100:1092-1102.
85. Xu C, Auger J, Govindjee. Chlorophyll a fluorescence measurements of isolated spinach thylakoids using single-laser-based flow cytometry. Cytometry 1990;11:349-358.
86. Pfundel E, Meister A. Flow cytometry of mesophyll and bundle sheath chloroplast thylakoids of maize (Zea mays L.). Cytometry 1996;23:97-105.
87. Jones RJ, Srienc F, Roessler J. Flow cytometric determination of light-scattering and absorbency properties of starch granules. Starch 1992;44:243-247.
88. Kohler RH, Zipfel WR, Webb WW, Hanson MR. The Green Fluorescent Protein as a marker to visualize plant mitochondria in vivo. Plant J 1997;11:613-621.
89. Petit P, Diolez P, Muller P, Brown SC. Binding of concanavalin A to the outer membrane of potato tuber mitochondria detected by flow cytometry. FEBS Lett 1986;196:65-70.
90. Petit PX. Flow cytometric analysis of Rhodamine 123 fluorescence during modulation of the membrane potential in plant mitochondria. Plant Physiol 1992;98:279-286.
91. Afonso CL, Galbraith DW. The callus associated protein (CAP) gene of Nicotiana tabacum: isolation, characterization, and evidence for possible function as a transcriptional factor. In Vitro Cell Dev Biol Plants 1994;30:44-54.
92. Grebenok RJ, Lambert GM, Galbraith DW. Characterization of the targeted nuclear accumulation of GFP within the cells of transgenic plants. Plant J 1997;12:685-696.
93. Grebenok RJ, Pierson EA, Lambert GM, Gong F-C, Afonso CL, Haldeman-Cahill R, Carrington JC, Galbraith DW. Green-fluorescent protein fusions for efficient characterization of nuclear localization signals. Plant J 1997;11:573-586.
94. Macas J, Lambert GM, Dolezel D, Galbraith DW. NEST (nuclear expressed sequence tag) analysis: a novel means to study transcription through amplification of nuclear RNA. Cytometry 1998;33:460-468.
95. Galbraith DW, Elumalai R, Gong F-C. Integrative flow cytometric and microarray approaches for use in transcriptional profiling. Methods Mol Biol 2003. Forthcoming.
96. Chytilova E, Macas J, Galbraith DW. Green fluorescent protein targeted to the nucleus, a transgenic phenotype useful for studies in plant biology. Ann Botany 1999;83:645-654.
97. Dolezel J, Lucretti S, Schubert I. Plant chromosome analysis and sorting by flow cytometry. Crit Rev Plant Sci 1994;13:275-309.
98. Fox MH, Galbraith DW. The application of flow cytometry and sorting to higher plant systems. In: Melamed MR, Lindmo T, Mendelsohn ML, editors. Flow cytometry and cell sorting. New York: John Wiley & Sons; 1990. p 633-650.
99. Dolezel J, Lysak MA, Kubalakova M, Simkova H, Macas J, Lucretti S. Sorting of plant chromosomes. Methods Cell Biol 2001;64:3-31.
100. Galbraith DW. Flow cytometric analysis of plant genomes. Methods Cell Biol 1990;33:549-562.
101. Galbraith DW. Isolation and flow cytometric characterization of plant protoplasts. Methods Cell Biol 1990;33:527-547.
102. Galbraith DW. Flow cytometry and sorting of plant protoplasts and cells. Methods Cell Biol 1994;42:539-561.
103. Galbraith DW, Dolezel J, Lambert G, Macas J. DNA and ploidy analyses in higher plants. In: Robinson JP, et al., editors. Current protocols in cytometry New York: Wiley; 1998. p 7.6.1-7.6.22.
104. Galbraith DW, Herzenberg LA, Anderson M. Flow cytometric analysis of transgene expression in higher plants: green fluorescent protein. Methods Enzymol 1999;320:296-315.
105. Lucretti S, Dolezel J. Cell cycle synchronization, chromosome isolation, and flow-sorting in plants. Methods Cell Biol 1995;50:61-83.
106. Dubelaar GBJ, Gerritzen PL. CytoBuoy: a step forward towards using flow cytometry in operational oceanography. Science 2000;64:255-265.