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Volumn 96, Issue 1, 2004, Pages 119-134

Molecular systematics of citrus-associated Alternaria species

Author keywords

Anonymous region; Beta tubulin; Black rot; Endopolygalacturonase; Mitochondrial LSU rDNA; Phylogeny; Phytopathogen

Indexed keywords

FUNGUS; TAXONOMY;

EID: 1542350992     PISSN: 00275514     EISSN: None     Source Type: Journal    
DOI: 10.1080/15572536.2005.11833002     Document Type: Article
Times cited : (199)

References (57)
  • 1
    • 0005923719 scopus 로고
    • The morphology and taxonomy of Alternaria citri
    • Bliss DE, Fawcett HS. 1944. The morphology and taxonomy of Alternaria citri. Mycologia 36:469-502.
    • (1944) Mycologia , vol.36 , pp. 469-502
    • Bliss, D.E.1    Fawcett, H.S.2
  • 2
    • 0033017973 scopus 로고    scopus 로고
    • A method for designing primer sets for speciation studies in filamentous ascomycetes
    • Carbone I, Kohn LM. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91:553-556.
    • (1999) Mycologia , vol.91 , pp. 553-556
    • Carbone, I.1    Kohn, L.M.2
  • 3
    • 0035046735 scopus 로고    scopus 로고
    • A microbial population-species interface: Nested cladistic and coalescent inference with multilocus data
    • _, _. 2001. A microbial population-species interface: nested cladistic and coalescent inference with multilocus data. Mol Ecol 10:947-964.
    • (2001) Mol Ecol , vol.10 , pp. 947-964
  • 4
    • 0001416427 scopus 로고
    • Letters on the diseases of plants - Alternaria of the citrus tribe
    • Cobb NA. 1903. Letters on the diseases of plants - Alternaria of the citrus tribe. Agric Gaz NSW 14:955-986.
    • (1903) Agric Gaz NSW , vol.14 , pp. 955-986
    • Cobb, N.A.1
  • 5
    • 0033494954 scopus 로고    scopus 로고
    • Phylogenetic relationships of Cylindrocladium pseudogracile and Cylindrocladium rumohrae with morphologically similar taxa, based on morphology and DNA sequences of internal transcribed spacers and beta-tubulin
    • Crous PW, Kang JC, Schoch CL, Mchau GRA. 1999. Phylogenetic relationships of Cylindrocladium pseudogracile and Cylindrocladium rumohrae with morphologically similar taxa, based on morphology and DNA sequences of internal transcribed spacers and beta-tubulin. Can J Bot 77:1813-1820.
    • (1999) Can J Bot , vol.77 , pp. 1813-1820
    • Crous, P.W.1    Kang, J.C.2    Schoch, C.L.3    Mchau, G.R.A.4
  • 8
    • 0031940433 scopus 로고    scopus 로고
    • Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus
    • USA
    • Geiser DM, Pitt JI, Taylor JW. 1998. Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. PNAS (USA) 95:388-393.
    • (1998) PNAS , vol.95 , pp. 388-393
    • Geiser, D.M.1    Pitt, J.I.2    Taylor, J.W.3
  • 9
    • 0030734126 scopus 로고    scopus 로고
    • RFLP markers show genetic recombination in Botryotinia fuckeliana (Botrytis cinerea) and transposable elements reveal two sympatric species
    • Giraud T, Fortini D, Levis C, Leroux P, and Brygoo Y. 1997. RFLP markers show genetic recombination in Botryotinia fuckeliana (Botrytis cinerea) and transposable elements reveal two sympatric species. Mol Biol Evol 14: 1177-1185.
    • (1997) Mol Biol Evol , vol.14 , pp. 1177-1185
    • Giraud, T.1    Fortini, D.2    Levis, C.3    Leroux, P.4    Brygoo, Y.5
  • 11
    • 0036259583 scopus 로고    scopus 로고
    • A conditionally dispensable chromosome controls host-specific pathogenicity in the fungal plant pathogen Alternaria alternata
    • Hatta R, Ito K, Hosaki Y, Tanaka T, Tanaka A, Yamamoto M, Akimitsu K, Tsuge T. 2002. A conditionally dispensable chromosome controls host-specific pathogenicity in the fungal plant pathogen Alternaria alternata. Genetics 161:59-70.
    • (2002) Genetics , vol.161 , pp. 59-70
    • Hatta, R.1    Ito, K.2    Hosaki, Y.3    Tanaka, T.4    Tanaka, A.5    Yamamoto, M.6    Akimitsu, K.7    Tsuge, T.8
  • 12
    • 0035018083 scopus 로고    scopus 로고
    • Endopolygalacturonase is essential for citrus black rot caused by Alternaria citri but not brown spot caused by Alternaria alternata
    • Isshiki A, Akimitsu K, Yamamoto M, Yamamoto H. 2001. Endopolygalacturonase is essential for citrus black rot caused by Alternaria citri but not brown spot caused by Alternaria alternata. MPMI 14:749-757.
    • (2001) MPMI , vol.14 , pp. 749-757
    • Isshiki, A.1    Akimitsu, K.2    Yamamoto, M.3    Yamamoto, H.4
  • 13
    • 0034041314 scopus 로고    scopus 로고
    • Cloning and characterization of a cyclic peptide synthetase gene from Alternaria alternata apple pathotype whose product is involved in AM-toxin synthesis and pathogenicity
    • Johnson RD, Johnson LJ, Itoh Y, Kodama M, Otani H, Kohmoto K. 2000. Cloning and characterization of a cyclic peptide synthetase gene from Alternaria alternata apple pathotype whose product is involved in AM-toxin synthesis and pathogenicity. MPMI 13:742-753.
    • (2000) MPMI , vol.13 , pp. 742-753
    • Johnson, R.D.1    Johnson, L.J.2    Itoh, Y.3    Kodama, M.4    Otani, H.5    Kohmoto, K.6
  • 14
    • 0034875181 scopus 로고    scopus 로고
    • Spontaneous loss of a conditionally dispensable chromosome from the Alternaria alternata apple pathotype leads to loss of toxin production and pathogenicity
    • Johnson LJ, Johnson RD, Akamatsu H, Salamiah A, Otani H, Kohmoto K, Kodama M. 2001. Spontaneous loss of a conditionally dispensable chromosome from the Alternaria alternata apple pathotype leads to loss of toxin production and pathogenicity. Curr Genet 40:65-72.
    • (2001) Curr Genet , vol.40 , pp. 65-72
    • Johnson, L.J.1    Johnson, R.D.2    Akamatsu, H.3    Salamiah, A.4    Otani, H.5    Kohmoto, K.6    Kodama, M.7
  • 15
    • 0036818366 scopus 로고    scopus 로고
    • Phylogenetic analysis of Alternaria spp, associated with apple core rot and citrus black rot in South Africa
    • Kang J-C, Crous PW, Mchau GRA, Serdani M, Song S-M. 2002. Phylogenetic analysis of Alternaria spp, associated with apple core rot and citrus black rot in South Africa. Mycol Res 106:1151-1162.
    • (2002) Mycol Res , vol.106 , pp. 1151-1162
    • Kang, J.-C.1    Crous, P.W.2    Gra, M.3    Serdani, M.4    Song, S.-M.5
  • 16
    • 0005959327 scopus 로고
    • Brown spot of Emperor mandarin
    • Kiely TB. 1964. Brown spot of Emperor mandarin. Agric Gaz NSW 75:854-856.
    • (1964) Agric Gaz NSW , vol.75 , pp. 854-856
    • Kiely, T.B.1
  • 18
    • 0028064606 scopus 로고
    • Nuclear ribosomal DNA variation and pathogenic specialization in Alternaria fungi known to produce host-specific toxins
    • Kusaba M, Tsuge T. 1994. Nuclear ribosomal DNA variation and pathogenic specialization in Alternaria fungi known to produce host-specific toxins. Appl Environ Micro 60:3055-3062.
    • (1994) Appl Environ Micro , vol.60 , pp. 3055-3062
    • Kusaba, M.1    Tsuge, T.2
  • 19
    • 0028825553 scopus 로고
    • Phylogeny of Alternaria fungi known to produce host-specific toxins on the basis of variation in internal transcribed spacers of ribosomal DNA
    • _, _. 1995. Phylogeny of Alternaria fungi known to produce host-specific toxins on the basis of variation in internal transcribed spacers of ribosomal DNA. Curr Genet 28:491-498.
    • (1995) Curr Genet , vol.28 , pp. 491-498
  • 20
    • 0000640723 scopus 로고    scopus 로고
    • Mitochondrial DNA variation in host-specific toxin-producing pathogens in the genus Alternaria
    • _, _. 1997. Mitochondrial DNA variation in host-specific toxin-producing pathogens in the genus Alternaria. Ann Phytopathol Soc Jpn 63:463-469.
    • (1997) Ann Phytopathol Soc Jpn , vol.63 , pp. 463-469
  • 22
    • 0032922842 scopus 로고    scopus 로고
    • Molecular characterization of Alternaria linicola and its detection in linseed
    • McKay GJ, Brown A, Bjourson AJ, Mercer PC. 1999. Molecular characterization of Alternaria linicola and its detection in linseed. Eur J Plant Pathol 105:157-166.
    • (1999) Eur J Plant Pathol , vol.105 , pp. 157-166
    • McKay, G.J.1    Brown, A.2    Bjourson, A.J.3    Mercer, P.C.4
  • 23
    • 0002004710 scopus 로고
    • Host-specific toxins and chemical structures from Alternaria species
    • Nishimura S, Kohmoto K. 1983. Host-specific toxins and chemical structures from Alternaria species. Ann Rev Phytopathol 21:87-116.
    • (1983) Ann Rev Phytopathol , vol.21 , pp. 87-116
    • Nishimura, S.1    Kohmoto, K.2
  • 24
    • 0031065526 scopus 로고    scopus 로고
    • Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous
    • O'Donnell K, Cigelnik E. 1997. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Mol Phyl Evol 7: 103-116.
    • (1997) Mol Phyl Evol , vol.7 , pp. 103-116
    • O'Donnell, K.1    Cigelnik, E.2
  • 25
    • 0031778848 scopus 로고    scopus 로고
    • Molecular systematics and phylogeography of the Gibberella fujikuroi species complex
    • _, _, Nirenberg HI. 1998. Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90:465-493.
    • (1998) Mycologia , vol.90 , pp. 465-493
    • Nirenberg, H.I.1
  • 26
    • 0034608827 scopus 로고    scopus 로고
    • Gene genealogies reveal global phylogenetic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab
    • USA
    • _, Kistler C, Tacke BK, Casper HH. 2000. Gene genealogies reveal global phylogenetic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab. PNAS(USA) 97:7905-7910.
    • (2000) PNAS , vol.97 , pp. 7905-7910
    • Kistler, C.1    Tacke, B.K.2    Casper, H.H.3
  • 27
    • 0001507773 scopus 로고
    • Alternaria toxins and their effects on host plants
    • Otani H, Kohmoto K, Kodama M. 1995. Alternaria toxins and their effects on host plants. Can J Bot 73(Suppl. 1):S543-S458.
    • (1995) Can J Bot , vol.73 , Issue.1 SUPPL.
    • Otani, H.1    Kohmoto, K.2    Kodama, M.3
  • 28
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An application to display phylogenetic trees on personal computers
    • Page RDM. 1996. TREEVIEW: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 29
    • 0028026087 scopus 로고
    • Isolation, pathogenicity, and partial host range of Alternaria limicola, causal agent of mancha foliar de los citricos in Mexico
    • Palm ME, Civerolo E. 1994. Isolation, pathogenicity, and partial host range of Alternaria limicola, causal agent of mancha foliar de los citricos in Mexico. Plant Dis 78: 879-883.
    • (1994) Plant Dis , vol.78 , pp. 879-883
    • Palm, M.E.1    Civerolo, E.2
  • 30
    • 0032857664 scopus 로고    scopus 로고
    • Population genetic structure and host specificity of Alternaria spp. causing brown spot of Minneola tangelo and rough lemon in Florida
    • Peever TL, Canihos LY, Olsen L, Ibañez A, Liu YC, Timmer LW. 1999. Population genetic structure and host specificity of Alternaria spp. causing brown spot of Minneola tangelo and rough lemon in Florida. Phytopathol 89: 851-860.
    • (1999) Phytopathol , vol.89 , pp. 851-860
    • Peever, T.L.1    Canihos, L.Y.2    Olsen, L.3    Ibañez, A.4    Liu, Y.C.5    Timmer, L.W.6
  • 31
    • 0036089179 scopus 로고    scopus 로고
    • Worldwide phylogeography of the citrus brown spot pathogen, Alternaria alternata
    • _, Ibañez A, Akimitsu K, Timmer LW. 2002. Worldwide phylogeography of the citrus brown spot pathogen, Alternaria alternata. Phytopathol 92:794-802.
    • (2002) Phytopathol , vol.92 , pp. 794-802
    • Ibañez, A.1    Akimitsu, K.2    Timmer, L.W.3
  • 32
    • 0002260662 scopus 로고
    • Studies of a strain of Alternaria citri Pierce, the causal organism of brown spot of Emperor mandarin
    • Pegg KG. 1966. Studies of a strain of Alternaria citri Pierce, the causal organism of brown spot of Emperor mandarin. Queensland J Agric Animal Sci 23:15-28.
    • (1966) Queensland J Agric Animal Sci , vol.23 , pp. 15-28
    • Pegg, K.G.1
  • 33
    • 0034486766 scopus 로고    scopus 로고
    • Molecular phylogenetic relationships amongst Alternaria species and related fungi based upon analysis of nuclear ITS and mtSSU rDNA sequences
    • Pryor BM, Gilbertson RL. 2000. Molecular phylogenetic relationships amongst Alternaria species and related fungi based upon analysis of nuclear ITS and mtSSU rDNA sequences. Mycol Res 104:1312-1321.
    • (2000) Mycol Res , vol.104 , pp. 1312-1321
    • Pryor, B.M.1    Gilbertson, R.L.2
  • 34
    • 0036218316 scopus 로고    scopus 로고
    • Morphological, pathogenic and molecular characterization of Alternaria isolates associated with Alternaria late blight of pistachio
    • _, Michailides TJ. 2002. Morphological, pathogenic and molecular characterization of Alternaria isolates associated with Alternaria late blight of pistachio. Phytopathol 92:406-416.
    • (2002) Phytopathol , vol.92 , pp. 406-416
    • Michailides, T.J.1
  • 35
    • 0001568648 scopus 로고
    • A strain of Alternaria citri Ellis & Pierce causing a leaf spot of rough lemon in Florida
    • Ruehle GD. 1937. A strain of Alternaria citri Ellis & Pierce causing a leaf spot of rough lemon in Florida. Phytopathol 27:863-865.
    • (1937) Phytopathol , vol.27 , pp. 863-865
    • Ruehle, G.D.1
  • 36
    • 0014048296 scopus 로고
    • Typification of Alternaria, Stemphylium and Ulocladium
    • Simmons EG. 1967. Typification of Alternaria, Stemphylium and Ulocladium. Mycologia 59:67-92.
    • (1967) Mycologia , vol.59 , pp. 67-92
    • Simmons, E.G.1
  • 37
    • 0003319701 scopus 로고
    • Alternaria themes and variations
    • _. 1981. Alternaria themes and variations. Mycotaxon 13:16-34.
    • (1981) Mycotaxon , vol.13 , pp. 16-34
  • 38
    • 0000278943 scopus 로고
    • Alternaria themes and variations (22-26)
    • _. 1986. Alternaria themes and variations (22-26). Mycotaxon 25:287-308.
    • (1986) Mycotaxon , vol.25 , pp. 287-308
  • 39
    • 0002944935 scopus 로고
    • Alternaria themes and variations (27-53)
    • _. 1990. Alternaria themes and variations (27-53). Mycotaxon 37:79-119.
    • (1990) Mycotaxon , vol.37 , pp. 79-119
  • 40
    • 0002982492 scopus 로고
    • Alternaria taxonomy: Current status, viewpoint, challenge
    • Chelkowski J, Visconti A, ed. Amsterdam: Elsevier
    • _. 1992. Alternaria taxonomy: current status, viewpoint, challenge. In: Chelkowski J, Visconti A, ed. Alternaria: biology, plant diseases and metabolites.Amsterdam: Elsevier. p 1-35.
    • (1992) Alternaria: Biology, Plant Diseases and Metabolites , pp. 1-35
  • 41
    • 1542364630 scopus 로고
    • Alternaria themes and variations (63-72)
    • _. 1993. Alternaria themes and variations (63-72). Mycotaxon 48:63-72.
    • (1993) Mycotaxon , vol.48 , pp. 63-72
  • 42
    • 0002635152 scopus 로고
    • Alternaria themes and variations (112-144)
    • _. 1995. Alternaria themes and variations (112-144). Mycotaxon 55:55-163.
    • (1995) Mycotaxon , vol.55 , pp. 55-163
  • 43
    • 0032658907 scopus 로고    scopus 로고
    • Alternaria themes and variations (226-235)
    • _. 1999a. Alternaria themes and variations (226-235). Mycotaxon 70:263-323.
    • (1999) Mycotaxon , vol.70 , pp. 263-323
  • 44
    • 0032625418 scopus 로고    scopus 로고
    • Alternaria themes and variations (236-243): Host-specific toxin producers
    • _. 1999b. Alternaria themes and variations (236-243): host-specific toxin producers. Mycotaxon 70:325-369.
    • (1999) Mycotaxon , vol.70 , pp. 325-369
  • 45
    • 0034215565 scopus 로고    scopus 로고
    • Alternaria themes and variations (244-286): Species on Solanaceae
    • _. 2000. Alternaria themes and variations (244-286): species on Solanaceae. Mycotaxon 75:1-115.
    • (2000) Mycotaxon , vol.75 , pp. 1-115
  • 46
    • 21144468649 scopus 로고
    • Alternaria themes and variations (73)
    • _, Roberts RG. 1993. Alternaria themes and variations (73). Mycotaxon 48:109-140.
    • (1993) Mycotaxon , vol.48 , pp. 109-140
    • Roberts, R.G.1
  • 47
    • 84987046960 scopus 로고
    • Alternaria brown spot on Minneola tangelos in Israel
    • Solel Z. 1991. Alternaria brown spot on Minneola tangelos in Israel. Plant Pathol 40:145-147.
    • (1991) Plant Pathol , vol.40 , pp. 145-147
    • Solel, Z.1
  • 48
    • 0005964436 scopus 로고    scopus 로고
    • Molecular systematics of citrus-associated Alternaria spp.
    • Su G, Peever TL, Timmer LW. 2001. Molecular systematics of citrus-associated Alternaria spp. Phytopathol 91(Suppl):S190.
    • (2001) Phytopathol , vol.91 , Issue.SUPPL.
    • Su, G.1    Peever, T.L.2    Timmer, L.W.3
  • 49
    • 0039466725 scopus 로고    scopus 로고
    • Combining data with different distributions of among-site rate variation
    • Sullivan J. 1996. Combining data with different distributions of among-site rate variation. Syst Biol 45:375-380.
    • (1996) Syst Biol , vol.45 , pp. 375-380
    • Sullivan, J.1
  • 51
    • 0033180258 scopus 로고    scopus 로고
    • Insertional mutagenesis and cloning of the genes required for biosynthesis of the host-specific AK-toxin in the Japanese pear pathotype of Alternaria alternata
    • Tanaka A, Shiotani H, Yamamoto M, Tsuge T. 1999. Insertional mutagenesis and cloning of the genes required for biosynthesis of the host-specific AK-toxin in the Japanese pear pathotype of Alternaria alternata. MPMI 12: 691-702.
    • (1999) MPMI , vol.12 , pp. 691-702
    • Tanaka, A.1    Shiotani, H.2    Yamamoto, M.3    Tsuge, T.4
  • 52
    • 0033837581 scopus 로고    scopus 로고
    • Structural and functional complexity of the genomic region controlling AK-toxin biosynthesis and pathogenicity in the Japanese pear pathotype of Alternaria alternata
    • _, Tsuge T. 2000. Structural and functional complexity of the genomic region controlling AK-toxin biosynthesis and pathogenicity in the Japanese pear pathotype of Alternaria alternata. MPMI 13:975-986.
    • (2000) MPMI , vol.13 , pp. 975-986
    • Tsuge, T.1
  • 54
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nuc Acids Res 24:4876-4882.
    • (1997) Nuc Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 55
    • 0032994048 scopus 로고    scopus 로고
    • Partial beta-tubulin gene sequences for evolutionary studies in the Basidiomycotina
    • Thon MR, Royse DJ. 1999. Partial beta-tubulin gene sequences for evolutionary studies in the Basidiomycotina. Mycologia 91:468-474.
    • (1999) Mycologia , vol.91 , pp. 468-474
    • Thon, M.R.1    Royse, D.J.2
  • 56
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Innis MA, Gelfand DH, Sininsky JJ, White TJ, eds. San Diego,California: Academic Press
    • White IJ, Bruns T, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sininsky JJ, White TJ, eds. PCR Protocols-a guide to methods and applications. San Diego,California: Academic Press, p 315-322.
    • (1990) PCR Protocols-a Guide to Methods and Applications , pp. 315-322
    • White, I.J.1    Bruns, T.2    Lee, S.3    Taylor, J.W.4
  • 57
    • 0000391572 scopus 로고
    • A newly recorded Alternaria-induced brown spot disease on Dancy tangerines in Florida
    • Whiteside JO. 1976. A newly recorded Alternaria-induced brown spot disease on Dancy tangerines in Florida. Plant Dis Reptr 60:326-329.
    • (1976) Plant Dis Reptr , vol.60 , pp. 326-329
    • Whiteside, J.O.1


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