-
1
-
-
0031941447
-
The GAA triplet-repeat expansion in Friedreich ataxia interferes with transcription and may be associated with an unusual DNA structure
-
Bidichandani, S. I., T. Ashizawa, and P. I. Patel. 1998. The GAA triplet-repeat expansion in Friedreich ataxia interferes with transcription and may be associated with an unusual DNA structure. Am. J. Hum. Genet. 62:111-121.
-
(1998)
Am. J. Hum. Genet.
, vol.62
, pp. 111-121
-
-
Bidichandani, S.I.1
Ashizawa, T.2
Patel, P.I.3
-
2
-
-
0035201633
-
The intrinsically unstable life of DNA triplet repeats associated with human hereditary disorders
-
Bowater, R. P., and R. D. Wells. 2001. The intrinsically unstable life of DNA triplet repeats associated with human hereditary disorders. Prog. Nucleic Acid Res. Mol. Biol. 66:159-202.
-
(2001)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.66
, pp. 159-202
-
-
Bowater, R.P.1
Wells, R.D.2
-
3
-
-
0023646792
-
The localization of replication origins on ARS plasmids in S. cerevisiae
-
Brewer, B. J., and W. L. Fangman. 1987. The localization of replication origins on ARS plasmids in S. cerevisiae. Cell 51:463-471.
-
(1987)
Cell
, vol.51
, pp. 463-471
-
-
Brewer, B.J.1
Fangman, W.L.2
-
4
-
-
9844222853
-
Frataxin is reduced in Friedreich ataxia patients and is associated with mitochondrial membranes
-
Campuzano, V., L. Montermini, Y. Lutz, L. Cova, C. Hindelag, S. Jiralerspong, Y. Trottier, S. J. Kish, B. Faucheux, P. Trouillas, F. J. Authier, A. Durr, J.-L. Mandel, A. L. Vescovi, M. Pandolfo, and M. Koenig. 1997. Frataxin is reduced in Friedreich ataxia patients and is associated with mitochondrial membranes. Hum. Mol. Genet. 6:1771-1780.
-
(1997)
Hum. Mol. Genet.
, vol.6
, pp. 1771-1780
-
-
Campuzano, V.1
Montermini, L.2
Lutz, Y.3
Cova, L.4
Hindelag, C.5
Jiralerspong, S.6
Trottier, Y.7
Kish, S.J.8
Faucheux, B.9
Trouillas, P.10
Authier, F.J.11
Durr, A.12
Mandel, J.-L.13
Vescovi, A.L.14
Pandolfo, M.15
Koenig, M.16
-
5
-
-
13344270899
-
Friedreich's ataxia: Autosomal recessive disease caused by an intronic GAA triplet repeat expansion
-
Campuzano, V., L. Montermini, M. D. Molto, L. Pianese, M. Cossee, F. Cavalcanti, E. Monros, F. Rodius, F. Duclos, A. Monticelli, F. Zara, J. Canizares, H. Koutnikova, S. I. Bidichandari, C. Gellera, A. Brice, P. Trouillas, G. De Michele, A. Filla, R. De Frutos, F. Palau, P. I. Patel, S. Di Donato, J.-L. Mandel, S. Cocozza, M. Koenig, and M. Pandolfo. 1996. Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion. Science 271:1423-1427.
-
(1996)
Science
, vol.271
, pp. 1423-1427
-
-
Campuzano, V.1
Montermini, L.2
Molto, M.D.3
Pianese, L.4
Cossee, M.5
Cavalcanti, F.6
Monros, E.7
Rodius, F.8
Duclos, F.9
Monticelli, A.10
Zara, F.11
Canizares, J.12
Koutnikova, H.13
Bidichandari, S.I.14
Gellera, C.15
Brice, A.16
Trouillas, P.17
De Michele, G.18
Filla, A.19
De Frutos, R.20
Palau, F.21
Patel, P.I.22
Di Donato, S.23
Mandel, J.-L.24
Cocozza, S.25
Koenig, M.26
Pandolfo, M.27
more..
-
6
-
-
0036699095
-
Disruption of dog-1 in Caenorhabditis elegans triggers deletions upstream of guanine-rich DNA
-
Cheung, I., M. Schertzer, A. Rose, and P. M. Lansdorp. 2002 Disruption of dog-1 in Caenorhabditis elegans triggers deletions upstream of guanine-rich DNA. Nat. Genet. 4:405-409.
-
(2002)
Nat. Genet.
, vol.4
, pp. 405-409
-
-
Cheung, I.1
Schertzer, M.2
Rose, A.3
Lansdorp, P.M.4
-
7
-
-
0030739437
-
Evolution of the Friedreich's ataxia trinucleotide repeat expansion: Founder effect and premutations
-
Cossee, M., M. Schmitt, V. Campuzano, L. Reutenauer, C. Moutou, J. L. Mandel, and M. Koenig. 1997. Evolution of the Friedreich's ataxia trinucleotide repeat expansion: founder effect and premutations. Proc. Natl. Acad. Sci. USA 94:7452-7457.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 7452-7457
-
-
Cossee, M.1
Schmitt, M.2
Campuzano, V.3
Reutenauer, L.4
Moutou, C.5
Mandel, J.L.6
Koenig, M.7
-
8
-
-
0018823801
-
Replication of eukaryotic chromosomes: A close-up of the replication fork
-
DePamphilis, M. L., and P. M. Wassarman. 1980. Replication of eukaryotic chromosomes: a close-up of the replication fork. Annu. Rev. Biochem. 49:627-666.
-
(1980)
Annu. Rev. Biochem.
, vol.49
, pp. 627-666
-
-
DePamphilis, M.L.1
Wassarman, P.M.2
-
10
-
-
0028851598
-
Analysis of replication intermediates by two-dimensional agarose gel electrophoresis
-
Friedman, K. L., and B. J. Brewer. 1995. Analysis of replication intermediates by two-dimensional agarose gel electrophoresis. Methods Enzymol. 262:613-627.
-
(1995)
Methods Enzymol.
, vol.262
, pp. 613-627
-
-
Friedman, K.L.1
Brewer, B.J.2
-
11
-
-
0032012128
-
GAA instability in Friedreich's ataxia shares a common, DNA-directed and intraallelic mechanism with other trinucleotide diseases
-
Gacy, A. M., G. M. Goellner, C. Spiro, X. Chen, G. Gupta, E. M. Bradbury, R. B. Dyer, M. J. Mikesell, J. Z. Yao, A. J. Johnson, A. Richter, S. B. Melancon, and C. T. McMurray. 1998. GAA instability in Friedreich's ataxia shares a common, DNA-directed and intraallelic mechanism with other trinucleotide diseases. Mol. Cell 1:583-593.
-
(1998)
Mol. Cell
, vol.1
, pp. 583-593
-
-
Gacy, A.M.1
Goellner, G.M.2
Spiro, C.3
Chen, X.4
Gupta, G.5
Bradbury, E.M.6
Dyer, R.B.7
Mikesell, M.J.8
Yao, J.Z.9
Johnson, A.J.10
Richter, A.11
Melancon, S.B.12
McMurray, C.T.13
-
12
-
-
0034660695
-
The GAA*TTC triplet repeat expanded in Friedreich's ataxia impedes transcription elongation by T7 RNA polymerase in a length and supercoil dependent manner
-
Grabczyk, E., and K. Usdin. 2000. The GAA*TTC triplet repeat expanded in Friedreich's ataxia impedes transcription elongation by T7 RNA polymerase in a length and supercoil dependent manner. Nucleic Acids Res. 28: 2815-2822.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 2815-2822
-
-
Grabczyk, E.1
Usdin, K.2
-
13
-
-
0033080760
-
Generation of microgram quantities of trinucleotide repeat tracts of defined length, interspersion pattern, and orientation
-
Grabczyk, E., and K. Usdin. 1999. Generation of microgram quantities of trinucleotide repeat tracts of defined length, interspersion pattern, and orientation. Anal. Biochem. 267:241-243.
-
(1999)
Anal. Biochem.
, vol.267
, pp. 241-243
-
-
Grabczyk, E.1
Usdin, K.2
-
14
-
-
0037462828
-
Hairpin formation in Friedreich's ataxia triplet repeat expansion
-
Heidenfelder, B. L., A. M. Makhov, and M. D. Topal. 2003. Hairpin formation in Friedreich's ataxia triplet repeat expansion. J. Biol. Chem. 278:2425-2431.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 2425-2431
-
-
Heidenfelder, B.L.1
Makhov, A.M.2
Topal, M.D.3
-
15
-
-
0033525081
-
Expansion and deletion of triplet repeat sequences in Escherichia coli occur on the leading strand of DNA replication
-
Iyer, R. R., and R. D. Wells. 1999. Expansion and deletion of triplet repeat sequences in Escherichia coli occur on the leading strand of DNA replication. J. Biol. Chem. 274:3865-3877.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 3865-3877
-
-
Iyer, R.R.1
Wells, R.D.2
-
16
-
-
0029966659
-
Unwinding of the third strand of a DNA triple helix, a novel activity of the SV40 large T-antigen helicase
-
Kopel, V., A. Pozner, N. Baran, and H. Manor. 1996. Unwinding of the third strand of a DNA triple helix, a novel activity of the SV40 large T-antigen helicase. Nucleic Acids Res. 24:330-335.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 330-335
-
-
Kopel, V.1
Pozner, A.2
Baran, N.3
Manor, H.4
-
17
-
-
0033536708
-
Large-scale effects of transcriptional DNA supercoiling in vivo
-
Krasilnikov, A. S., A. Podtelezhnikov, A. Vologodskii, and S. M. Mirkin. 1999. Large-scale effects of transcriptional DNA supercoiling in vivo. J. Mol. Biol. 292:1149-1160.
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 1149-1160
-
-
Krasilnikov, A.S.1
Podtelezhnikov, A.2
Vologodskii, A.3
Mirkin, S.M.4
-
18
-
-
0032167384
-
Transcription through a simple DNA repeat blocks replication elongation
-
Krasilnikova, M. M., G. M. Samadashwily, A. S. Krasilnikov, and S. M. Mirkin. 1998. Transcription through a simple DNA repeat blocks replication elongation. EMBO J. 17:5095-5102.
-
(1998)
EMBO J.
, vol.17
, pp. 5095-5102
-
-
Krasilnikova, M.M.1
Samadashwily, G.M.2
Krasilnikov, A.S.3
Mirkin, S.M.4
-
19
-
-
0035914472
-
A new trick for an old dog: TraY binding to a homopurine-homopyrimidine run attenuates DNA replication
-
Krasilnikova, M. M., E. V. Smirnova, A. S. Krasilnikov, and S. M. Mirkin. 2001. A new trick for an old dog: TraY binding to a homopurine-homopyrimidine run attenuates DNA replication. J. Mol. Biol. 313:271-282.
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 271-282
-
-
Krasilnikova, M.M.1
Smirnova, E.V.2
Krasilnikov, A.S.3
Mirkin, S.M.4
-
20
-
-
0034720861
-
Unique origin and specific ethnic distribution of the Friedreich ataxia GAA expansion
-
Labuda, M., D. Labuda, C. Miranda, J. Poirier, B. W. Soong, N. E. Barucha, and M. Pandolfo. 2000. Unique origin and specific ethnic distribution of the Friedreich ataxia GAA expansion. Neurology 54:2322-2324.
-
(2000)
Neurology
, vol.54
, pp. 2322-2324
-
-
Labuda, M.1
Labuda, D.2
Miranda, C.3
Poirier, J.4
Soong, B.W.5
Barucha, N.E.6
Pandolfo, M.7
-
21
-
-
0027986871
-
Efficient unwinding of triplex DNA by a DNA helicase
-
Maine, I. P., and T. Kodadek. 1994. Efficient unwinding of triplex DNA by a DNA helicase. Biochem. Biophys. Res. Commun. 204:1119-1124.
-
(1994)
Biochem. Biophys. Res. Commun.
, vol.204
, pp. 1119-1124
-
-
Maine, I.P.1
Kodadek, T.2
-
22
-
-
0033525103
-
The high-resolution structure of the triplex formed by the GAA/TTC triplet repeat associated with Friedreich's ataxia
-
Mariappan, S. V. S., P. Catasti, L. A. Silks, E. M. Bradbury, and G. Gupta. 1999. The high-resolution structure of the triplex formed by the GAA/TTC triplet repeat associated with Friedreich's ataxia. J. Mol. Biol. 285:2035-2052.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 2035-2052
-
-
Mariappan, S.V.S.1
Catasti, P.2
Silks, L.A.3
Bradbury, E.M.4
Gupta, G.5
-
23
-
-
0028857157
-
Mechanisms of DNA expansion
-
McMurray, C. T. 1995. Mechanisms of DNA expansion. Chromosoma 104: 2-13.
-
(1995)
Chromosoma
, vol.104
, pp. 2-13
-
-
McMurray, C.T.1
-
26
-
-
0029950726
-
Cloning, characterization, and properties of seven triplet repeat DNA sequences
-
Ohshima, K., S. Kang, J. E. Larson, and R. D. Wells. 1996. Cloning, characterization, and properties of seven triplet repeat DNA sequences. J. Biol. Chem. 271:16773-16783.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 16773-16783
-
-
Ohshima, K.1
Kang, S.2
Larson, J.E.3
Wells, R.D.4
-
27
-
-
0032486276
-
Inhibitory effects of expanded GAA.TTC triplet repeats from intron I of the Friedreich's ataxia gene on transcription and replication in vivo
-
Ohshima, K., L. Montermini, R. D. Wells, and M. Pandolfo. 1998. Inhibitory effects of expanded GAA.TTC triplet repeats from intron I of the Friedreich's ataxia gene on transcription and replication in vivo. J. Biol. Chem. 273:14588-14595.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 14588-14595
-
-
Ohshima, K.1
Montermini, L.2
Wells, R.D.3
Pandolfo, M.4
-
28
-
-
0030836589
-
Hairpin formation during DNA synthesis primer realignment in vitro in triplet repeat sequences from human hereditary disease genes
-
Ohshima, K., and R. D. Wells. 1997. Hairpin formation during DNA synthesis primer realignment in vitro in triplet repeat sequences from human hereditary disease genes. J. Biol. Chem. 272:16798-16806.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 16798-16806
-
-
Ohshima, K.1
Wells, R.D.2
-
29
-
-
0032863136
-
Molecular pathogenesis of Friedreich ataxia
-
Pandolfo, M. 1999. Molecular pathogenesis of Friedreich ataxia. Arch. Neurol. 56:1201-1208.
-
(1999)
Arch. Neurol.
, vol.56
, pp. 1201-1208
-
-
Pandolfo, M.1
-
30
-
-
0034969491
-
Friedreich ataxia: From GAA triplet-repeat expansion to frataxin deficiency
-
Patel, P. I., and G. Isaya. 2001. Friedreich ataxia: from GAA triplet-repeat expansion to frataxin deficiency. Am. J. Hum. Genet. 69:15-24.
-
(2001)
Am. J. Hum. Genet.
, vol.69
, pp. 15-24
-
-
Patel, P.I.1
Isaya, G.2
-
31
-
-
0037315530
-
Replication and expansion of trinucleotide repeats in yeast
-
Pelletier, R., M. M. Krasilnikova, G. M. Samadashwily, R. S. Lahue, and S. M. Mirkin. 2003. Replication and expansion of trinucleotide repeats in yeast. Mol. Cell. Biol. 23:1349-1357.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 1349-1357
-
-
Pelletier, R.1
Krasilnikova, M.M.2
Samadashwily, G.M.3
Lahue, R.S.4
Mirkin, S.M.5
-
32
-
-
0033120042
-
Sticky DNA: Self association properties of long GAA.TTC repeats in R.R.Y triplex structures from Friedreich's ataxia
-
Sakamoto, N., P. D. Chastain, P. Parniewski, K. Oshima, M. Pandolfo, J. D. Griffith, and R. D. Wells. 1999. Sticky DNA: self association properties of long GAA.TTC repeats in R.R.Y triplex structures from Friedreich's ataxia. Mol. Cell 3:465-475.
-
(1999)
Mol. Cell
, vol.3
, pp. 465-475
-
-
Sakamoto, N.1
Chastain, P.D.2
Parniewski, P.3
Oshima, K.4
Pandolfo, M.5
Griffith, J.D.6
Wells, R.D.7
-
33
-
-
0027425108
-
Suicidal nucleotide sequences for DNA polymerization
-
Samadashwily, G. M., A. Dayn, and S. M. Mirkin. 1993. Suicidal nucleotide sequences for DNA polymerization. EMBO J. 12:4975-4983.
-
(1993)
EMBO J.
, vol.12
, pp. 4975-4983
-
-
Samadashwily, G.M.1
Dayn, A.2
Mirkin, S.M.3
-
34
-
-
0028151352
-
Trapping DNA polymerases using triplex-forming oligodeoxyribonucleotides
-
Samadashwily, G. M., and S. M. Mirkin. 1994. Trapping DNA polymerases using triplex-forming oligodeoxyribonucleotides. Gene 149:127-136.
-
(1994)
Gene
, vol.149
, pp. 127-136
-
-
Samadashwily, G.M.1
Mirkin, S.M.2
-
35
-
-
0030725454
-
Trinucleotide repeats affect DNA replication in vivo
-
Samadashwily, G. M., G. Raca, and S. M. Mirkin. 1997. Trinucleotide repeats affect DNA replication in vivo. Nat. Genet. 17:298-304.
-
(1997)
Nat. Genet.
, vol.17
, pp. 298-304
-
-
Samadashwily, G.M.1
Raca, G.2
Mirkin, S.M.3
-
36
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual - 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual - 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
37
-
-
0033942440
-
DNA repeat expansions and human disease
-
Usdin, K., and E. Grahczyk. 2000. DNA repeat expansions and human disease. Cell. Mol. Life Sci. 57:914-931.
-
(2000)
Cell. Mol. Life Sci.
, vol.57
, pp. 914-931
-
-
Usdin, K.1
Grahczyk, E.2
-
38
-
-
0037131228
-
Sticky DNA, a long GAA · GAA · TTC triplex that is formed intramolecularly, in the sequence of intron 1 of the frataxin gene
-
Vetcher, A. A., M. Napierala, R. R. Iyer, P. D. Chastain, J. D. Griffith, and R. D. Wells. 2002. Sticky DNA, a long GAA · GAA · TTC triplex that is formed intramolecularly, in the sequence of intron 1 of the frataxin gene. J. Biol. Chem. 277:39217-39227.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 39217-39227
-
-
Vetcher, A.A.1
Napierala, M.2
Iyer, R.R.3
Chastain, P.D.4
Griffith, J.D.5
Wells, R.D.6
-
39
-
-
0030908093
-
Replication protein A: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
-
Wold, M. S. 1997. Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Annu. Rev. Biochem. 66:61-92.
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 61-92
-
-
Wold, M.S.1
-
40
-
-
0021710272
-
Use of lacZ fusions to delimit regulatory elements of the inducible divergent GAL1-GAL10 promoter in Saccharomyces cerevisiae
-
Youkum, R. R., S. Hanley, R. West, and M. Ptashne. 1984. Use of lacZ fusions to delimit regulatory elements of the inducible divergent GAL1-GAL10 promoter in Saccharomyces cerevisiae. Mol. Cell. Biol. 4:1985-1999.
-
(1984)
Mol. Cell. Biol.
, vol.4
, pp. 1985-1999
-
-
Youkum, R.R.1
Hanley, S.2
West, R.3
Ptashne, M.4
|