메뉴 건너뛰기




Volumn 31, Issue 3, 2004, Pages 425-434

Comparative phylogeography of Amphicarpaea legumes and their root-nodule symbionts in Japan and North America

Author keywords

Amphicarpaea; Biogeography; Coevolution; Phylogenetic congruence; Symbiosis

Indexed keywords

BACTERIUM; BIOGEOGRAPHY; COEVOLUTION; LEGUME; PHYLOGEOGRAPHY; SYMBIONT;

EID: 1542289808     PISSN: 03050270     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.0305-0270.2003.01030.x     Document Type: Article
Times cited : (25)

References (58)
  • 3
    • 0028668675 scopus 로고
    • Evolutionary history of the symbiosis between fungus-growing ants and their fungi
    • Chapela, I.H., Rehner, S.A., Schultz, T.R. & Mueller, U.G. (1994) Evolutionary history of the symbiosis between fungus-growing ants and their fungi. Science, 266, 1691-1694.
    • (1994) Science , vol.266 , pp. 1691-1694
    • Chapela, I.H.1    Rehner, S.A.2    Schultz, T.R.3    Mueller, U.G.4
  • 4
    • 0032731436 scopus 로고    scopus 로고
    • Sequence evolution in bacterial endosymbionts having extreme base composition
    • Clark, M.A., Moran N.A. & Baumann, P. (1999) Sequence evolution in bacterial endosymbionts having extreme base composition. Molecular Biology and Evolution, 16, 1586-1598.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 1586-1598
    • Clark, M.A.1    Moran, N.A.2    Baumann, P.3
  • 5
    • 0034104890 scopus 로고    scopus 로고
    • Cospeciation between bacterial endosymbionts (Buchnera) and a recent radiation of aphids (Uroleucon) and pitfalls of testing for phylogenetic congruence
    • Clark, M.A., Moran, N.A., Baumann, P. & Wernegreen, J.J. (2000) Cospeciation between bacterial endosymbionts (Buchnera) and a recent radiation of aphids (Uroleucon) and pitfalls of testing for phylogenetic congruence. Evolution, 54, 517-525.
    • (2000) Evolution , vol.54 , pp. 517-525
    • Clark, M.A.1    Moran, N.A.2    Baumann, P.3    Wernegreen, J.J.4
  • 7
    • 0036272829 scopus 로고    scopus 로고
    • Phylogeny and biogeography of Cercis (Fabaceae): Evidence from nuclear ribosomal ITS and chloroplast ndhF sequence data
    • Davis, C.C., Fritsch, P.W., Li, J. & Donoghue, M.J. (2002) Phylogeny and biogeography of Cercis (Fabaceae): evidence from nuclear ribosomal ITS and chloroplast ndhF sequence data. Systematic Botany, 27, 289-302.
    • (2002) Systematic Botany , vol.27 , pp. 289-302
    • Davis, C.C.1    Fritsch, P.W.2    Li, J.3    Donoghue, M.J.4
  • 8
    • 0033831427 scopus 로고    scopus 로고
    • Genotypic characterization of Bradyrhizobium strains nodulating small Senegalese legumes by 16S-23S rRNA intergenic gene spacers and amplified fragment length polymorphism fingerprint analyses
    • Doignon-Bourcier, F., Willems, A., Coopman, R., Laguerre, G., Gilles, M. & de Lajudie, P. (2000) Genotypic characterization of Bradyrhizobium strains nodulating small Senegalese legumes by 16S-23S rRNA intergenic gene spacers and amplified fragment length polymorphism fingerprint analyses. Applied and Environmental Microbiology, 66, 3987-3997.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 3987-3997
    • Doignon-Bourcier, F.1    Willems, A.2    Coopman, R.3    Laguerre, G.4    Gilles, M.5    De Lajudie, P.6
  • 9
    • 0000479431 scopus 로고
    • Isolation of plant DNA from fresh tissue
    • Doyle, J.J. & Doyle, J.L. (1990) Isolation of plant DNA from fresh tissue. Focus, 12, 13-15.
    • (1990) Focus , vol.12 , pp. 13-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 10
    • 0000160143 scopus 로고
    • Chloroplast DNA phylogeny of the papilionoid legume tribe Phaseoleae
    • Doyle, J.J. & Doyle, J.L. (1993) Chloroplast DNA phylogeny of the papilionoid legume tribe Phaseoleae. Systematic Botany, 18, 309-327.
    • (1993) Systematic Botany , vol.18 , pp. 309-327
    • Doyle, J.J.1    Doyle, J.L.2
  • 11
    • 0030332668 scopus 로고    scopus 로고
    • Phylogenetic utility of histone H3 intron sequences in the perennial relatives of soybean (Glycine : Leguminosae)
    • Doyle, J.J., Kanazin, V. & Shoemaker, R.C. (1996) Phylogenetic utility of histone H3 intron sequences in the perennial relatives of soybean (Glycine : Leguminosae). Molecular Phylogenetics and Evolution, 6, 438-447.
    • (1996) Molecular Phylogenetics and Evolution , vol.6 , pp. 438-447
    • Doyle, J.J.1    Kanazin, V.2    Shoemaker, R.C.3
  • 13
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 14
    • 0022376704 scopus 로고
    • Dating the Human-ape split by a molecular clock of mitochondrial DNA
    • Hasegawa, M., Kishino, H. & Yano, T. (1985) Dating the Human-ape split by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution, 22, 160-174.
    • (1985) Journal of Molecular Evolution , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 16
    • 0031062341 scopus 로고    scopus 로고
    • Phylogenetic and genomic relationships in the genus Glycine Willd. based on sequences from the ITS region of nuclear rDNA
    • Kollipara, K.P., Singh, R.J. & Hymowitz, T. (1997) Phylogenetic and genomic relationships in the genus Glycine Willd. based on sequences from the ITS region of nuclear rDNA. Genome, 40, 57-68.
    • (1997) Genome , vol.40 , pp. 57-68
    • Kollipara, K.P.1    Singh, R.J.2    Hymowitz, T.3
  • 18
    • 0031707698 scopus 로고    scopus 로고
    • Molecular diversity of rhizobia occurring on native shrubby legumes in southeastern Australia
    • Lafay, B. & Burdon, J.J. (1998) Molecular diversity of rhizobia occurring on native shrubby legumes in southeastern Australia. Applied and Environmental Microbiology, 64, 3989-3997.
    • (1998) Applied and Environmental Microbiology , vol.64 , pp. 3989-3997
    • Lafay, B.1    Burdon, J.J.2
  • 19
    • 0002936756 scopus 로고
    • Evolution in a mutualistic environment
    • ed. by D.H. Boucher, Oxford University Press, New York
    • Law, R. (1985) Evolution in a mutualistic environment. The biology of mutualism (ed. by D.H. Boucher), pp. 145-170. Oxford University Press, New York.
    • (1985) The Biology of Mutualism , pp. 145-170
    • Law, R.1
  • 21
    • 0031715683 scopus 로고    scopus 로고
    • Competitive dominance among strains of luminous bacteria provides an unusual form of evidence for parallel evolution in sepiolid squid-Vibrio symbioses
    • Nishiguchi, M.K., Ruby, E.G. & McFall-Ngai, M.J. (1998) Competitive dominance among strains of luminous bacteria provides an unusual form of evidence for parallel evolution in sepiolid squid-Vibrio symbioses. Applied and Environmental Microbiology, 64, 3209-3213.
    • (1998) Applied and Environmental Microbiology , vol.64 , pp. 3209-3213
    • Nishiguchi, M.K.1    Ruby, E.G.2    McFall-Ngai, M.J.3
  • 23
    • 0029824484 scopus 로고    scopus 로고
    • Cryptic species within Amphicarpaea bracteata (Leguminosae): Evidence from isozymes, morphology, and pathogen specificity
    • Parker, M.A. (1996) Cryptic species within Amphicarpaea bracteata (Leguminosae): evidence from isozymes, morphology, and pathogen specificity. Canadian Journal of Botany, 74, 1640-1650.
    • (1996) Canadian Journal of Botany , vol.74 , pp. 1640-1650
    • Parker, M.A.1
  • 24
    • 0033008769 scopus 로고    scopus 로고
    • Mutualism in metapopulations of legumes and rhizobia
    • Parker, M.A. (1999a) Mutualism in metapopulations of legumes and rhizobia. American Naturalist, 153, S48-S60.
    • (1999) American Naturalist , vol.153
    • Parker, M.A.1
  • 25
    • 0032755260 scopus 로고    scopus 로고
    • Relationships of bradyrhizobia from the legumes Apios americana and Desmodium glutinosum
    • Parker, M.A. (1999b) Relationships of bradyrhizobia from the legumes Apios americana and Desmodium glutinosum. Applied and Environmental Microbiology, 65, 4914-4920.
    • (1999) Applied and Environmental Microbiology , vol.65 , pp. 4914-4920
    • Parker, M.A.1
  • 26
    • 0034489933 scopus 로고    scopus 로고
    • Divergent Bradyrhizobium symbionts on Tachigali versicolor from Barro Colorado Island, Panama
    • Parker, M.A. (2000) Divergent Bradyrhizobium symbionts on Tachigali versicolor from Barro Colorado Island, Panama. Systematic and Applied Microbiology, 23, 585-590.
    • (2000) Systematic and Applied Microbiology , vol.23 , pp. 585-590
    • Parker, M.A.1
  • 27
    • 0035344698 scopus 로고    scopus 로고
    • Case of localized recombination in 23S rRNA genes from divergent Bradyrhizobium lineages associated with Neotropical legumes
    • Parker, M.A. (2001) Case of localized recombination in 23S rRNA genes from divergent Bradyrhizobium lineages associated with Neotropical legumes. Applied and Environmental Microbiology, 67, 2076-2082.
    • (2001) Applied and Environmental Microbiology , vol.67 , pp. 2076-2082
    • Parker, M.A.1
  • 28
    • 0036211217 scopus 로고    scopus 로고
    • Bradyrhizobia from wild Phaseolus, Desmodium, and Macroptilium species in northern Mexico
    • Parker, M.A. (2002) Bradyrhizobia from wild Phaseolus, Desmodium, and Macroptilium species in northern Mexico. Applied and Environmental Microbiology, 68, 2044-2048.
    • (2002) Applied and Environmental Microbiology , vol.68 , pp. 2044-2048
    • Parker, M.A.1
  • 29
    • 0041874641 scopus 로고    scopus 로고
    • Genetic markers for analyzing symbiotic relationships and lateral gene transfer in Neotropical bradyrhizobia
    • Parker, M.A. (2003) Genetic markers for analyzing symbiotic relationships and lateral gene transfer in Neotropical bradyrhizobia. Molecular Ecology, 12, 2447-2455.
    • (2003) Molecular Ecology , vol.12 , pp. 2447-2455
    • Parker, M.A.1
  • 30
    • 0034126928 scopus 로고    scopus 로고
    • Relationships of bradyrhizobia from Platypodium and Machaerium (Papilionoideae tribe Dalbergieae) on Barro Colorado Island, Panama
    • Parker, M.A. & Lunk, A. (2000) Relationships of bradyrhizobia from Platypodium and Machaerium (Papilionoideae tribe Dalbergieae) on Barro Colorado Island, Panama. International Journal of Systematic and Evolutionary Microbiology, 50, 1179-1186.
    • (2000) International Journal of Systematic and Evolutionary Microbiology , vol.50 , pp. 1179-1186
    • Parker, M.A.1    Lunk, A.2
  • 31
    • 0034756350 scopus 로고    scopus 로고
    • Rhizobitoxine production and symbiotic compatibility of Bradyrhizobium from Asian and North American lineages of Amphicarpaea
    • Parker, M.A. & Peters, N.K. (2001) Rhizobitoxine production and symbiotic compatibility of Bradyrhizobium from Asian and North American lineages of Amphicarpaea. Canadian Journal of Microbiology, 47, 889-894.
    • (2001) Canadian Journal of Microbiology , vol.47 , pp. 889-894
    • Parker, M.A.1    Peters, N.K.2
  • 32
    • 0031697398 scopus 로고    scopus 로고
    • Geographic structure of lineage associations in a plant-bacterial mutualism
    • Parker, M.A. & Spoerke, J.M. (1998) Geographic structure of lineage associations in a plant-bacterial mutualism. Journal of Evolutionary Biology, 11, 549-562.
    • (1998) Journal of Evolutionary Biology , vol.11 , pp. 549-562
    • Parker, M.A.1    Spoerke, J.M.2
  • 33
    • 0031456236 scopus 로고    scopus 로고
    • A locus controlling nodulation specificity in Amphicarpaea bracteata (Leguminosae)
    • Parker, M.A. & Wilkinson, H.H. (1997) A locus controlling nodulation specificity in Amphicarpaea bracteata (Leguminosae). Journal of Heredity, 88, 449-453.
    • (1997) Journal of Heredity , vol.88 , pp. 449-453
    • Parker, M.A.1    Wilkinson, H.H.2
  • 34
    • 0000452549 scopus 로고
    • Molecular divergence between Asian and North American species of Liriodendron (Magnoliaceae) with implications for interpretation of fossil data
    • Parks, C.R. & Wendel, J.F. (1990) Molecular divergence between Asian and North American species of Liriodendron (Magnoliaceae) with implications for interpretation of fossil data. American Journal of Botany, 77, 1243-1256.
    • (1990) American Journal of Botany , vol.77 , pp. 1243-1256
    • Parks, C.R.1    Wendel, J.F.2
  • 37
    • 0345701207 scopus 로고    scopus 로고
    • rRNA and nifD phylogeny of Bradyrhizobium from sites across the Pacific Basin
    • Qian, J., Kwon, S.-W. & Parker, M.A. (2003) rRNA and nifD phylogeny of Bradyrhizobium from sites across the Pacific Basin. FEMS Microbiology Letters, 219, 159-165.
    • (2003) FEMS Microbiology Letters , vol.219 , pp. 159-165
    • Qian, J.1    Kwon, S.-W.2    Parker, M.A.3
  • 38
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987) The neighbour-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406-425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 40
    • 0032229320 scopus 로고    scopus 로고
    • Cladistic biogeography of Gleditsia (Leguminosae) based on ndhF and rpl16 chloroplast gene sequences
    • Schnabel, A. & Wendel, J.F. (1998) Cladistic biogeography of Gleditsia (Leguminosae) based on ndhF and rpl16 chloroplast gene sequences. American Journal of Botany, 85, 1753-1765.
    • (1998) American Journal of Botany , vol.85 , pp. 1753-1765
    • Schnabel, A.1    Wendel, J.F.2
  • 42
    • 0028801013 scopus 로고
    • Fragmentation of the large-subunit rRNA in the family Rhizobiaceae
    • Selenska-Pobell, S. & Evguenieva-Hackenberg, E. (1995) Fragmentation of the large-subunit rRNA in the family Rhizobiaceae. Journal of Bacteriology, 177, 6993-6998.
    • (1995) Journal of Bacteriology , vol.177 , pp. 6993-6998
    • Selenska-Pobell, S.1    Evguenieva-Hackenberg, E.2
  • 43
    • 0024341852 scopus 로고
    • A cladistic measure of gene flow inferred from the phylogenies of alleles
    • Slatkin, M. & Maddison, W.P. (1989) A cladistic measure of gene flow inferred from the phylogenies of alleles. Genetics, 123, 603-613.
    • (1989) Genetics , vol.123 , pp. 603-613
    • Slatkin, M.1    Maddison, W.P.2
  • 44
    • 0030046399 scopus 로고    scopus 로고
    • Non-random genotypic associations in a legume-Bradyrhizobium mutualism
    • Spoerke, J.M., Wilkinson, H.H. & Parker, M.A. (1996) Non-random genotypic associations in a legume-Bradyrhizobium mutualism. Evolution, 50, 146-154.
    • (1996) Evolution , vol.50 , pp. 146-154
    • Spoerke, J.M.1    Wilkinson, H.H.2    Parker, M.A.3
  • 45
    • 0032883089 scopus 로고    scopus 로고
    • Diversity and relationships of bradyrhizobia from Amphicarpaea bracteata based on partial nod and ribosomal sequences
    • Sterner, J.P. & Parker, M.A. (1999) Diversity and relationships of bradyrhizobia from Amphicarpaea bracteata based on partial nod and ribosomal sequences. Systematic and Applied Microbiology, 22, 387-392.
    • (1999) Systematic and Applied Microbiology , vol.22 , pp. 387-392
    • Sterner, J.P.1    Parker, M.A.2
  • 46
    • 0026261665 scopus 로고
    • Universal primers for amplification of three non-coding regions of chloroplast DNA
    • Taberlet, P., Gielly, L., Pautou, G. & Bouvet, J. (1991) Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology, 17, 1105-1109.
    • (1991) Plant Molecular Biology , vol.17 , pp. 1105-1109
    • Taberlet, P.1    Gielly, L.2    Pautou, G.3    Bouvet, J.4
  • 49
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgans, D.G. & Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgans, D.G.2    Gibson, T.J.3
  • 50
    • 0002790430 scopus 로고
    • A taxonomic study of the genus Amphicarpaea (Leguminosae)
    • Turner, B.L. & Fearing, O.S. (1964) A taxonomic study of the genus Amphicarpaea (Leguminosae). Southwestern Naturalist, 9, 207-218.
    • (1964) Southwestern Naturalist , vol.9 , pp. 207-218
    • Turner, B.L.1    Fearing, O.S.2
  • 51
    • 0034525526 scopus 로고    scopus 로고
    • Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gene and internally transcribed spacer region sequence divergence
    • Van Berkum, P. & Fuhrmann, J.J. (2000) Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gene and internally transcribed spacer region sequence divergence. International Journal of Systematic and Evolutionary Microbiology, 50, 2165-2172
    • (2000) International Journal of Systematic and Evolutionary Microbiology , vol.50 , pp. 2165-2172
    • Van Berkum, P.1    Fuhrmann, J.J.2
  • 53
    • 0033381934 scopus 로고    scopus 로고
    • Evolution of eastern Asian and eastern North American disjunct distributions in flowering plants
    • Wen, J. (1999) Evolution of eastern Asian and eastern North American disjunct distributions in flowering plants. Annual Review of Ecology and Systematics, 30, 421-455.
    • (1999) Annual Review of Ecology and Systematics , vol.30 , pp. 421-455
    • Wen, J.1
  • 55
    • 0029660860 scopus 로고    scopus 로고
    • Divergence in symbiotic compatibility in a legume-Bradyrhizobium mutualism
    • Wilkinson, H.H., Spoerke, J.M. & Parker, M.A. (1996) Divergence in symbiotic compatibility in a legume-Bradyrhizobium mutualism. Evolution, 50, 1470-1477.
    • (1996) Evolution , vol.50 , pp. 1470-1477
    • Wilkinson, H.H.1    Spoerke, J.M.2    Parker, M.A.3
  • 56
    • 0001279038 scopus 로고
    • Preparation of genomic DNA from bacteria
    • ed. by F.M. Ausubel, J. Wiley, New York
    • Wilson, J.K. (1994) Preparation of genomic DNA from bacteria. Current protocols in molecular biology (ed. by F.M. Ausubel), pp. 2.4.1-2.4.5. J. Wiley, New York.
    • (1994) Current Protocols in Molecular Biology , pp. 241-245
    • Wilson, J.K.1
  • 57
    • 0036865629 scopus 로고    scopus 로고
    • Characterization of rhizobia that nodulate legume species within the genus Lespedeza and description of Bradyrhizobium yuanmingense sp. nov.
    • Yao, Z.Y., Kan, F.L., Wang, E.T. & Chen, W.X. (2002) Characterization of rhizobia that nodulate legume species within the genus Lespedeza and description of Bradyrhizobium yuanmingense sp. nov. International Journal of Systematic and Evolutionary Microbiology, 52, 2219-2230.
    • (2002) International Journal of Systematic and Evolutionary Microbiology , vol.52 , pp. 2219-2230
    • Yao, Z.Y.1    Kan, F.L.2    Wang, E.T.3    Chen, W.X.4
  • 58
    • 0003109559 scopus 로고    scopus 로고
    • Diversity and phylogeny of rhizobia
    • Young, J.P.W. & Haukka, K.E. (1996) Diversity and phylogeny of rhizobia. New Phytologist, 133, 87-94.
    • (1996) New Phytologist , vol.133 , pp. 87-94
    • Young, J.P.W.1    Haukka, K.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.