-
1
-
-
0024297194
-
Purification and characterization of acetate kinase from acetate-grown Methanosarcina thermophila. Evidence for regulation of synthesis
-
Aceti, D. J., and J. G. Ferry. 1988. Purification and characterization of acetate kinase from acetate-grown Methanosarcina thermophila. Evidence for regulation of synthesis. J. Biol. Chem. 263:15444-15448.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 15444-15448
-
-
Aceti, D.J.1
Ferry, J.G.2
-
2
-
-
0032518372
-
The mechanism of regulation of hexokinase: New insights from the crystal structure of recombinant human brain hexokinase complexed with glucose and glucose-6-phosphate
-
Aleshin, A. E., C. Zeng, G. P. Bourenkov, H. D. Bartunik, H. J. Fromm, and R. B. Honzatko. 1998. The mechanism of regulation of hexokinase: new insights from the crystal structure of recombinant human brain hexokinase complexed with glucose and glucose-6-phosphate. Structure 6:39-50.
-
(1998)
Structure
, vol.6
, pp. 39-50
-
-
Aleshin, A.E.1
Zeng, C.2
Bourenkov, G.P.3
Bartunik, H.D.4
Fromm, H.J.5
Honzatko, R.B.6
-
3
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipmann. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipmann, D.J.5
-
4
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
5
-
-
0031573453
-
Closed structure of phosphoglycerate kinase from Thermotoga maritima reveals the catalytic mechanism and determinants of thermal stability
-
Auerbach, G., R. Huber, M. Grattinger, K. Zaiss, H. Schurig, R. Jaenicke, and U. Jacob. 1997. Closed structure of phosphoglycerate kinase from Thermotoga maritima reveals the catalytic mechanism and determinants of thermal stability. Structure 5:1475-1483.
-
(1997)
Structure
, vol.5
, pp. 1475-1483
-
-
Auerbach, G.1
Huber, R.2
Grattinger, M.3
Zaiss, K.4
Schurig, H.5
Jaenicke, R.6
Jacob, U.7
-
6
-
-
0018781487
-
18O]triphosphate and the mechanistic consequences for the reactions catalyzed by glycerol kinase, hexokinase, pyruvate kinase, and acetate kinase
-
18O]triphosphate and the mechanistic consequences for the reactions catalyzed by glycerol kinase, hexokinase, pyruvate kinase, and acetate kinase. Biochemistry 18:3927-3933.
-
(1979)
Biochemistry
, vol.18
, pp. 3927-3933
-
-
Blattler, W.A.1
Knowles, J.R.2
-
7
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
8
-
-
0035158122
-
Urkinase: Structure of acetate kinase, a member of the ASKHA superfamily of phosphotransferases
-
Buss, K. A., D. R. Cooper, C. Ingram-Smith, J. G. Ferry, D. A. Sanders, and M. S. Hasson. 2001. Urkinase: structure of acetate kinase, a member of the ASKHA superfamily of phosphotransferases. J. Bacteriol. 183:680-686.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 680-686
-
-
Buss, K.A.1
Cooper, D.R.2
Ingram-Smith, C.3
Ferry, J.G.4
Sanders, D.A.5
Hasson, M.S.6
-
9
-
-
0031457064
-
Crystallization of acetate kinase from Methanosarcina thermophila and prediction of its fold
-
Buss, K. A., C. Ingram-Smith, J. G. Ferry, D. A. Sanders, and M. S. Hasson. 1997. Crystallization of acetate kinase from Methanosarcina thermophila and prediction of its fold. Protein Sci. 6:2659-2662.
-
(1997)
Protein Sci.
, vol.6
, pp. 2659-2662
-
-
Buss, K.A.1
Ingram-Smith, C.2
Ferry, J.G.3
Sanders, D.A.4
Hasson, M.S.5
-
10
-
-
0033596853
-
Crystal structures of Escherichia coli glycerol kinase variant S58→W in complex with nonhydrolyzable ATP analogues reveal a putative active conformation of the enzyme as a result of domain motion
-
Bystrom, C. E., D. W. Pettigrew, B. P. Branchaud, P. O'Brien, and S. J. Remington. 1999. Crystal structures of Escherichia coli glycerol kinase variant S58→W in complex with nonhydrolyzable ATP analogues reveal a putative active conformation of the enzyme as a result of domain motion. Biochemistry 38:3508-3518.
-
(1999)
Biochemistry
, vol.38
, pp. 3508-3518
-
-
Bystrom, C.E.1
Pettigrew, D.W.2
Branchaud, B.P.3
O'Brien, P.4
Remington, S.J.5
-
11
-
-
0027318150
-
Change in direction of flagellar rotation in Escherichia coli mediated by acetate kinase
-
Dailey, F. E., and H. C. Berg. 1993. Change in direction of flagellar rotation in Escherichia coli mediated by acetate kinase. J. Bacteriol. 175:3236-3239.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3236-3239
-
-
Dailey, F.E.1
Berg, H.C.2
-
12
-
-
0030838597
-
Enzymology of the fermentation of acetate to methane by Methanosarcina thermophila
-
Ferry, J. G. 1997. Enzymology of the fermentation of acetate to methane by Methanosarcina thermophila. Biofactors 6:25-35.
-
(1997)
Biofactors
, vol.6
, pp. 25-35
-
-
Ferry, J.G.1
-
13
-
-
0022967087
-
Phosphate transfer between acetate kinase and enzyme I of the bacterial phosphotransferase system
-
Fox, D. K., N. D. Meadow, and S. Roseman. 1986. Phosphate transfer between acetate kinase and enzyme I of the bacterial phosphotransferase system. J. Biol. Chem. 261:13498-13503.
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 13498-13503
-
-
Fox, D.K.1
Meadow, N.D.2
Roseman, S.3
-
14
-
-
15444365167
-
Structural and kinetic analyses of arginine residues in the active-site of the acetate kinase from Methanosarcina thermophila
-
in press
-
Gorrell, A., S. H. Lawrence, and J. G. Ferry. Structural and kinetic analyses of arginine residues in the active-site of the acetate kinase from Methanosarcina thermophila. J. Biol. Chem., in press.
-
J. Biol. Chem.
-
-
Gorrell, A.1
Lawrence, S.H.2
Ferry, J.G.3
-
15
-
-
0029948487
-
The sugar kinase/heat shock protein 70/actin superfamily: Implications of conserved structure for mechanism
-
Hurley, J. H. 1996. The sugar kinase/heat shock protein 70/actin superfamily: implications of conserved structure for mechanism. Annu. Rev. Biophys. Biomol. Struct. 25:137-162.
-
(1996)
Annu. Rev. Biophys. Biomol. Struct.
, vol.25
, pp. 137-162
-
-
Hurley, J.H.1
-
16
-
-
0034721788
-
The role of histidines in the acetate kinase from Methanosarcina thermophila
-
Ingram-Smith, C., R. D. Barber, and J. G. Ferry. 2000. The role of histidines in the acetate kinase from Methanosarcina thermophila. J. Biol. Chem. 275:33765-33770.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 33765-33770
-
-
Ingram-Smith, C.1
Barber, R.D.2
Ferry, J.G.3
-
17
-
-
84889120137
-
Improved methods for binding protein models in electron density maps and the location of errors in these models
-
Jones, T. A., J. Y. Zou, S. W. Cowan, and M. Kjeldgaard. 1991. Improved methods for binding protein models in electron density maps and the location of errors in these models. Acta Crystallogr. Sect. A 47:110-119.
-
(1991)
Acta Crystallogr. Sect. A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
19
-
-
0027995683
-
Detection, delineation, measurement and display of cavities in macromolecular structures
-
Kleywegt, G. J., and T. A. Jones. 1994. Detection, delineation, measurement and display of cavities in macromolecular structures. Acta Crystallogr. Sect. D 50:178-185.
-
(1994)
Acta Crystallogr. Sect. D
, vol.50
, pp. 178-185
-
-
Kleywegt, G.J.1
Jones, T.A.2
-
20
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis, P. J. 1991. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24:946-950.
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
21
-
-
0023613953
-
Rapid and efficient site-specific mutagenesis without phenotypic selection
-
Kunkel, T. A., J. D. Roberts, and R. A. Zakour. 1987. Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol. 154:367-382.
-
(1987)
Methods Enzymol.
, vol.154
, pp. 367-382
-
-
Kunkel, T.A.1
Roberts, J.D.2
Zakour, R.A.3
-
22
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
23
-
-
0027382864
-
Cloning, sequence analysis, and hyperexpression of the genes encoding phosphotransacetylase and acetate kinase from Methanosarcina thermophila
-
Latimer, M. T., and J. G. Ferry. 1993. Cloning, sequence analysis, and hyperexpression of the genes encoding phosphotransacetylase and acetate kinase from Methanosarcina thermophila. J. Bacteriol. 175:6822-6829.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 6822-6829
-
-
Latimer, M.T.1
Ferry, J.G.2
-
24
-
-
0002758108
-
Enzymatic synthesis of acetyl phosphate
-
Lipmann, F. 1944. Enzymatic synthesis of acetyl phosphate. J. Biol. Chem. 155:55-70.
-
(1944)
J. Biol. Chem.
, vol.155
, pp. 55-70
-
-
Lipmann, F.1
-
25
-
-
0030815133
-
Raster3D photorealistic molecular graphics
-
Merritt, E., and D. Bacon. 1997. Raster3D photorealistic molecular graphics. Methods Enzymol. 277:505-524.
-
(1997)
Methods Enzymol.
, vol.277
, pp. 505-524
-
-
Merritt, E.1
Bacon, D.2
-
26
-
-
0037151123
-
Evidence for a transition state analog, MgADP-aluminum fluoride-acetate, in acetate kinase from Methanosarcina thermophila
-
Miles, R. D., A. Gorrell, and J. G. Ferry. 2002. Evidence for a transition state analog, MgADP-aluminum fluoride-acetate, in acetate kinase from Methanosarcina thermophila. J. Biol. Chem. 277:22547-22552.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 22547-22552
-
-
Miles, R.D.1
Gorrell, A.2
Ferry, J.G.3
-
27
-
-
0035976897
-
Site-directed mutational analysis of active site residues in the acetate kinase from Methanosarcina thermophila
-
Miles, R. D., P. P. Iyer, and J. G. Ferry. 2001. Site-directed mutational analysis of active site residues in the acetate kinase from Methanosarcina thermophila. J. Biol. Chem. 276:45059-45064.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 45059-45064
-
-
Miles, R.D.1
Iyer, P.P.2
Ferry, J.G.3
-
29
-
-
0037406882
-
Propionyl coenzyme A is a common intermediate in the 1,2-propanediol and propionate catabolic pathways needed for expression of the prpBCDE operon during growth of Salmonella enterica on 1,2-propanediol
-
Palacios, S., V. J. Starai, and J. C. Escalante-Semerena. 2003. Propionyl coenzyme A is a common intermediate in the 1,2-propanediol and propionate catabolic pathways needed for expression of the prpBCDE operon during growth of Salmonella enterica on 1,2-propanediol. J. Bacteriol. 185:2802-2810.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2802-2810
-
-
Palacios, S.1
Starai, V.J.2
Escalante-Semerena, J.C.3
-
30
-
-
0032518195
-
Conserved active site aspartates and domain-domain interactions in regulatory properties of the sugar kinase superfamily
-
Pettigrew, D. W., G. B. Smith, K. P. Thomas, and D. C. Dodds. 1998. Conserved active site aspartates and domain-domain interactions in regulatory properties of the sugar kinase superfamily. Arch. Biochem. Biophys. 349:236-245.
-
(1998)
Arch. Biochem. Biophys.
, vol.349
, pp. 236-245
-
-
Pettigrew, D.W.1
Smith, G.B.2
Thomas, K.P.3
Dodds, D.C.4
-
31
-
-
0000534273
-
Enzymatic phosphorylation of acetate
-
Rose, I. A., M. Grunberg-Manago, S. R. Korey, and S. Ochoa. 1954. Enzymatic phosphorylation of acetate. J. Biol. Chem. 211:737-756.
-
(1954)
J. Biol. Chem.
, vol.211
, pp. 737-756
-
-
Rose, I.A.1
Grunberg-Manago, M.2
Korey, S.R.3
Ochoa, S.4
-
32
-
-
0031932848
-
Identification of essential glutamates in the acetate kinase from Methanosarcina thermophila
-
Erratum, J. Bacteriol. 180: 3018
-
Singh-Wissmann, K., C. Ingram-Smith, R. D. Miles, and J. G. Ferry. 1998. Identification of essential glutamates in the acetate kinase from Methanosarcina thermophila. J. Bacteriol. 180:1129-1134. (Erratum, J. Bacteriol. 180: 3018.)
-
(1998)
J. Bacteriol.
, vol.180
, pp. 1129-1134
-
-
Singh-Wissmann, K.1
Ingram-Smith, C.2
Miles, R.D.3
Ferry, J.G.4
-
33
-
-
0034603706
-
Identification of essential arginines in the acetate kinase from Methanosarcina thermophila
-
Singh-Wissmann, K., R. D. Miles, C. Ingram-Smith, and J. G. Ferry. 2000. Identification of essential arginines in the acetate kinase from Methanosarcina thermophila. Biochemistry 39:3671-3677.
-
(2000)
Biochemistry
, vol.39
, pp. 3671-3677
-
-
Singh-Wissmann, K.1
Miles, R.D.2
Ingram-Smith, C.3
Ferry, J.G.4
-
34
-
-
0017091311
-
Escherichia coli acetate kinase mechanism studied by net initial rate, equilibrium, and independent isotopic exchange kinetics
-
Skarstedt, M. T., and E. Silverstein. 1976. Escherichia coli acetate kinase mechanism studied by net initial rate, equilibrium, and independent isotopic exchange kinetics. J. Biol. Chem. 251:6775-6783.
-
(1976)
J. Biol. Chem.
, vol.251
, pp. 6775-6783
-
-
Skarstedt, M.T.1
Silverstein, E.2
-
35
-
-
0011063236
-
Acetate kinase: A triple-displacement enzyme
-
Spector, L. B. 1980. Acetate kinase: a triple-displacement enzyme. Proc. Natl. Acad. Sci. USA 77:2626-2630.
-
(1980)
Proc. Natl. Acad. Sci. USA
, vol.77
, pp. 2626-2630
-
-
Spector, L.B.1
-
37
-
-
0021919826
-
A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes
-
Tabor, S., and C. C. Richardson. 1985. A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes. Proc. Natl. Acad. Sci. USA 82:1074-1078.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 1074-1078
-
-
Tabor, S.1
Richardson, C.C.2
-
38
-
-
0031574072
-
The CLUSTAL_X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The CLUSTAL_X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
39
-
-
0016275998
-
Evidence for the formation of a gamma-phosphorylated glutamyl residue in the Escherichia coli acetate kinase reaction
-
Todhunter, J. A., and D. L. Purich. 1974. Evidence for the formation of a gamma-phosphorylated glutamyl residue in the Escherichia coli acetate kinase reaction. Biochem. Biophys. Res. Commun. 60:273-280.
-
(1974)
Biochem. Biophys. Res. Commun.
, vol.60
, pp. 273-280
-
-
Todhunter, J.A.1
Purich, D.L.2
-
40
-
-
0017129535
-
A kinetically important phosphoryl-enzyme intermediary in the intrinsic purine nucleoside-5′-diphosphokinase activity of Escherichia coli acetate kinase
-
Todhunter, J. A., K. B. Reichel, and D. L. Purich. 1976. A kinetically important phosphoryl-enzyme intermediary in the intrinsic purine nucleoside-5′-diphosphokinase activity of Escherichia coli acetate kinase. Arch. Biochem. Biophys. 174:120-128.
-
(1976)
Arch. Biochem. Biophys.
, vol.174
, pp. 120-128
-
-
Todhunter, J.A.1
Reichel, K.B.2
Purich, D.L.3
|