메뉴 건너뛰기




Volumn 18, Issue 2, 2005, Pages 337-347

Indirect evidence from DNA sequence diversity for genetic degeneration of the Y-chromosome in dioecious species of the plant Silene: The SlY4/SlX4 and DD44-X/DD44-Y gene pairs

Author keywords

Plant sex chromosomes; Selective sweep; Silene dioica; Silene latifolia

Indexed keywords

PRIMER DNA;

EID: 14844357045     PISSN: 1010061X     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2004.00833.x     Document Type: Article
Times cited : (30)

References (43)
  • 1
    • 0035211272 scopus 로고    scopus 로고
    • A putative monofunctional fructose-2,6-bisphosphatase gene has functional copies located on the X and Y sex chromosomes in white campion (Silene latifolia)
    • Atanassov, I., Delichère, C., Filatov, D.A., Charlesworth, D., Negrutiu, I. & Monéger, F. 2001. A putative monofunctional fructose-2,6-bisphosphatase gene has functional copies located on the X and Y sex chromosomes in white campion (Silene latifolia). Mol. Biol. Evol. 18: 2162-2168.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 2162-2168
    • Atanassov, I.1    Delichère, C.2    Filatov, D.A.3    Charlesworth, D.4    Negrutiu, I.5    Monéger, F.6
  • 2
    • 0034618763 scopus 로고    scopus 로고
    • Reduced levels of microsatellite variability on the neo-Y chromosome of Drosophila miranda
    • Bachtrog, D. & Charlesworth, B. 2000. Reduced levels of microsatellite variability on the neo-Y chromosome of Drosophila miranda. Curr. Bio. 10: 1025-1031.
    • (2000) Curr. Bio. , vol.10 , pp. 1025-1031
    • Bachtrog, D.1    Charlesworth, B.2
  • 3
    • 0037149526 scopus 로고    scopus 로고
    • Reduced adaptation of a non-recombining neo-Y chromosome
    • Bachtrog, D. & Charlesworth, B. 2002. Reduced adaptation of a non-recombining neo-Y chromosome. Nature 416: 323-326.
    • (2002) Nature , vol.416 , pp. 323-326
    • Bachtrog, D.1    Charlesworth, B.2
  • 4
    • 0002450077 scopus 로고
    • Stages in invasion and replacement demonstrated by species of Melandrium
    • Baker, H.G. 1948. Stages in invasion and replacement demonstrated by species of Melandrium. J. Ecology 36: 96-119.
    • (1948) J. Ecology , vol.36 , pp. 96-119
    • Baker, H.G.1
  • 6
    • 0031901554 scopus 로고    scopus 로고
    • Measures of divergence between populations and the effect of forces that reduce variability
    • Charlesworth, B. 1998. Measures of divergence between populations and the effect of forces that reduce variability. Mol. Biol. Evol. 15: 538-543.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 538-543
    • Charlesworth, B.1
  • 7
    • 85047681047 scopus 로고    scopus 로고
    • Plant sex determination and sex chromosomes
    • Charlesworth, D. 2002. Plant sex determination and sex chromosomes. Heredity 88: 94-101.
    • (2002) Heredity , vol.88 , pp. 94-101
    • Charlesworth, D.1
  • 9
    • 0031450133 scopus 로고    scopus 로고
    • The effects of local selection, balanced polymorphism and background selection on equilibrium patterns of genetic diversity in subdivided inbreeding and outcrossing populations
    • Charlesworth, B., Nordborg, M. & Charlesworth, D. 1997. The effects of local selection, balanced polymorphism and background selection on equilibrium patterns of genetic diversity in subdivided inbreeding and outcrossing populations. Genetical Research 70: 155-174.
    • (1997) Genetical Research , vol.70 , pp. 155-174
    • Charlesworth, B.1    Nordborg, M.2    Charlesworth, D.3
  • 12
    • 0033911640 scopus 로고    scopus 로고
    • Hitchhiking under positive Darwinian selection
    • Fay, J.C. & Wu, C.I. 2000. Hitchhiking under positive Darwinian selection. Genetics 155: 1405-1413.
    • (2000) Genetics , vol.155 , pp. 1405-1413
    • Fay, J.C.1    Wu, C.I.2
  • 13
    • 0036899966 scopus 로고    scopus 로고
    • ProSeq: A software for preparation and evolutionary analysis of DNA sequence data sets
    • Filatov, D.A. 2002. ProSeq: a software for preparation and evolutionary analysis of DNA sequence data sets. Molecular Ecology Notes 2: 621-624.
    • (2002) Molecular Ecology Notes , vol.2 , pp. 621-624
    • Filatov, D.A.1
  • 14
    • 0342424207 scopus 로고    scopus 로고
    • Evolution of a plant Y-chromosome: Variability in a Y-linked gene of Silene latifolia
    • Filatov, D.A., Monéger, F., Negrutiu, I. & Charlesworth, D. 2000. Evolution of a plant Y-chromosome: variability in a Y-linked gene of Silene latifolia. Nature 404: 388-390.
    • (2000) Nature , vol.404 , pp. 388-390
    • Filatov, D.A.1    Monéger, F.2    Negrutiu, I.3    Charlesworth, D.4
  • 15
    • 0034903670 scopus 로고    scopus 로고
    • DNA diversity in sex linked and autosomal genes of the plant species Silene latifolia and S. dioica
    • Filatov, D.A., Laporte, V., Vitte, C. & Charlesworth, D. 2001. DNA diversity in sex linked and autosomal genes of the plant species Silene latifolia and S. dioica. Mol. Biol. Evol. 18: 1442-1454.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1442-1454
    • Filatov, D.A.1    Laporte, V.2    Vitte, C.3    Charlesworth, D.4
  • 16
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu, Y.-X. & Li, W.-H. 1993. Statistical tests of neutrality of mutations. Genetics 133: 693-709.
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.-X.1    Li, W.-H.2
  • 17
    • 0030619358 scopus 로고    scopus 로고
    • Genetic differentiation in Silene dioica metapopulations: Estimation of spatiotemporal effects in a successional plant species
    • Giles, B.E. & Goudet, J. 1997. Genetic differentiation in Silene dioica metapopulations: estimation of spatiotemporal effects in a successional plant species. The American Naturalist 149: 506-526.
    • (1997) The American Naturalist , vol.149 , pp. 506-526
    • Giles, B.E.1    Goudet, J.2
  • 18
    • 0035989428 scopus 로고    scopus 로고
    • The effect of Muller's ratchet on neutral diversity
    • Gordo, I., Charlesworth, B. & Navarro, A. 2002. The effect of Muller's ratchet on neutral diversity. Genetics 161: 835-848.
    • (2002) Genetics , vol.161 , pp. 835-848
    • Gordo, I.1    Charlesworth, B.2    Navarro, A.3
  • 19
    • 0036009437 scopus 로고    scopus 로고
    • C-banded karyotypes of two Silene species with heteromorphic sex chromosomes
    • Grabowska-Joachimiak, A. & Joachimiak, A. 2002. C-banded karyotypes of two Silene species with heteromorphic sex chromosomes. Genome 45: 243-252.
    • (2002) Genome , vol.45 , pp. 243-252
    • Grabowska-Joachimiak, A.1    Joachimiak, A.2
  • 20
    • 0032554935 scopus 로고    scopus 로고
    • An X-linked gene has a degenerate Y-linked homologue in the dioecious plant Silene latifolia
    • Guttman, D.S. & Charlesworth, D. 1998. An X-linked gene has a degenerate Y-linked homologue in the dioecious plant Silene latifolia. Nature 393: 263-266.
    • (1998) Nature , vol.393 , pp. 263-266
    • Guttman, D.S.1    Charlesworth, D.2
  • 21
    • 1242352075 scopus 로고    scopus 로고
    • Low levels of nucleotide diversity in mammalian y chromosomes
    • Hellborg, L. & Ellegren, H. 2004. Low levels of nucleotide diversity in mammalian y chromosomes. Mol. Biol. Evol. 21: 158-163.
    • (2004) Mol. Biol. Evol. , vol.21 , pp. 158-163
    • Hellborg, L.1    Ellegren, H.2
  • 22
    • 0001935493 scopus 로고
    • Gene genealogies and the coalescent process
    • Hudson, R.R. 1990. Gene genealogies and the coalescent process. Oxf. Surv. Evol. Biol. 7: 1-45.
    • (1990) Oxf. Surv. Evol. Biol. , vol.7 , pp. 1-45
    • Hudson, R.R.1
  • 23
    • 0023339852 scopus 로고
    • A test of neutral molecular evolution based on nucleotide data
    • Hudson, R.R., Kreitman, M. & Aguadé, M. 1987. A test of neutral molecular evolution based on nucleotide data. Genetics 116: 153-159.
    • (1987) Genetics , vol.116 , pp. 153-159
    • Hudson, R.R.1    Kreitman, M.2    Aguadé, M.3
  • 24
    • 0026512283 scopus 로고
    • A statistical test for detecting geographic subdivision
    • Hudson, R.R., Boos, D.D. & Kaplan, N.L. 1992. A statistical test for detecting geographic subdivision. Mol. Biol. Evol. 9: 138-151.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 138-151
    • Hudson, R.R.1    Boos, D.D.2    Kaplan, N.L.3
  • 25
    • 0034918692 scopus 로고    scopus 로고
    • Localization of male-specifically expressed MROS genes of Silene latifolia by PCR on flow-sorted sex chromosomes and autosomes
    • Kejnovsky, E., Vrana, J., Matsunaga, S., Soucek, P., Siroky, J., Dolezel, J. & Vyskot, B. 2001. Localization of male-specifically expressed MROS genes of Silene latifolia by PCR on flow-sorted sex chromosomes and autosomes. Genetics 158: 1269-1277.
    • (2001) Genetics , vol.158 , pp. 1269-1277
    • Kejnovsky, E.1    Vrana, J.2    Matsunaga, S.3    Soucek, P.4    Siroky, J.5    Dolezel, J.6    Vyskot, B.7
  • 27
    • 0033615708 scopus 로고    scopus 로고
    • Four evolutionary strata on the human X chromosome
    • Lahn, B.T. & Page, D.C. 1999. Four evolutionary strata on the human X chromosome. Science 286: 964-967.
    • (1999) Science , vol.286 , pp. 964-967
    • Lahn, B.T.1    Page, D.C.2
  • 28
    • 0036742524 scopus 로고    scopus 로고
    • Effective population size and population subdivision in demographically structured populations
    • Laporte, V. & Charlesworth, B. 2002. Effective population size and population subdivision in demographically structured populations. Genetics 162: 501-519.
    • (2002) Genetics , vol.162 , pp. 501-519
    • Laporte, V.1    Charlesworth, B.2
  • 30
    • 0029197891 scopus 로고
    • Local founding events as determinants of genetic structure in a plant metapopulation
    • McCauley, D.E., Raveill, J. & Antonovics, J. 1995. Local founding events as determinants of genetic structure in a plant metapopulation. Heredity 75: 630-636.
    • (1995) Heredity , vol.75 , pp. 630-636
    • McCauley, D.E.1    Raveill, J.2    Antonovics, J.3
  • 31
    • 0037278243 scopus 로고    scopus 로고
    • Genetic and functional analysis of DD44, a sex-linked gene from the dioecious plant Silene latifolia, provides clues to early events in sex chromosome evolution
    • Moore, R.C., Kozyreva, O., Lebel-Hardenack, S., Siroky, J., Hobza, R., Vyskot, B. & Grant, S.R. 2003. Genetic and functional analysis of DD44, a sex-linked gene from the dioecious plant Silene latifolia, provides clues to early events in sex chromosome evolution. Genetics 163: 321-334.
    • (2003) Genetics , vol.163 , pp. 321-334
    • Moore, R.C.1    Kozyreva, O.2    Lebel-Hardenack, S.3    Siroky, J.4    Hobza, R.5    Vyskot, B.6    Grant, S.R.7
  • 32
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei, M. 1973. Analysis of gene diversity in subdivided populations. Proc. Nat. Acad. Sci. USA 70: 3321-3323.
    • (1973) Proc. Nat. Acad. Sci. USA , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 33
    • 0033120607 scopus 로고    scopus 로고
    • Molecular phylogeography, intraspecific variation and the conservation of tree species
    • Newton, A.C., Allnutt, T.R., Gillies, A.C.M., Lowe, A.J. & Ennos, R.A. 1999. Molecular phylogeography, intraspecific variation and the conservation of tree species. Trends Ecol. Evol. 14: 140-145.
    • (1999) Trends Ecol. Evol. , vol.14 , pp. 140-145
    • Newton, A.C.1    Allnutt, T.R.2    Gillies, A.C.M.3    Lowe, A.J.4    Ennos, R.A.5
  • 34
    • 0345522051 scopus 로고
    • The sex-ratio in a dioecious endemic plant, Silene diclinis
    • Prentice, H.C. 1984. The sex-ratio in a dioecious endemic plant, Silene diclinis. Genetica 64: 129-133.
    • (1984) Genetica , vol.64 , pp. 129-133
    • Prentice, H.C.1
  • 35
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3.0: An integrated program for molecular population genetics and molecular evolution analysis
    • Rozas, J. & Rozas, R. 1999. DnaSP version 3.0: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15: 174-175.
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 38
    • 0031825318 scopus 로고    scopus 로고
    • Genetic hitch-hiking in a subdivided population
    • Slatkin, M. & Wiehe, T. 1998. Genetic hitch-hiking in a subdivided population. Genetic Research (Cambridge) 71: 155-160.
    • (1998) Genetic Research (Cambridge) , vol.71 , pp. 155-160
    • Slatkin, M.1    Wiehe, T.2
  • 39
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis
    • Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 40
    • 0028533729 scopus 로고
    • Sex-ratio in hybrids between Silene alba and Silene dioica - Evidence for Y-linked restorers
    • Taylor, D.R. 1994. Sex-ratio in hybrids between Silene alba and Silene dioica - evidence for Y-linked restorers. Heredity 73: 518-526.
    • (1994) Heredity , vol.73 , pp. 518-526
    • Taylor, D.R.1
  • 41
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. & Higgins, D.G. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 42
    • 0033823303 scopus 로고    scopus 로고
    • The effects of subdivision on the genetic divergence of populations and species
    • Wakeley, J. 2000. The effects of subdivision on the genetic divergence of populations and species. Evolution 54: 1092-1101.
    • (2000) Evolution , vol.54 , pp. 1092-1101
    • Wakeley, J.1
  • 43
    • 0000234377 scopus 로고
    • The mechanism of sex determination in dioecious plants
    • Westergaard, M. 1958. The mechanism of sex determination in dioecious plants. Adv. Genet. 9: 217-281.
    • (1958) Adv. Genet. , vol.9 , pp. 217-281
    • Westergaard, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.