Genetic and functional analysis of DD44, a sex-linked gene from the dioecious plant Silene latifolia, provides clues to early events in sex chromosome evolution

Genetics

Volumn 163, Issue 1, 2003, Pages 321-334

  Moore, Richard C ^a   Kozyreva, Olga ^a   Lebel Hardenack, Sabine ^a   Siroky, Jiri ^b   Hobza, Roman ^b   Vyskott, Boris ^b   Grant, Sarah R ^a  

^a UNIVERSITY OF NORTH CAROLINA   (United States)

^b INSTITUTE OF BIOPHYSICS   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

OLIGOMYCIN SENSITIVITY CONFERRING PROTEIN; PROTEIN; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; UNCLASSIFIED DRUG;

ARTICLE; CARPEL; CHROMOSOME REARRANGEMENT; CONTROLLED STUDY; DIFFERENTIAL DISPLAY; DIOECY; FLUORESCENCE IN SITU HYBRIDIZATION; GENE EXPRESSION; GENE FUNCTION; GENE LOCUS; GENE MAPPING; GENE REPRESSION; GENE STRUCTURE; GENETIC ANALYSIS; GENETIC ISOLATION BY DISTANCE; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; SEQUENCE HOMOLOGY; SEX CHROMOSOME; SEX LINKAGE; SILENE; X CHROMOSOME; Y CHROMOSOME;

ADENOSINE TRIPHOSPHATASES; CARRIER PROTEINS; EVOLUTION; IN SITU HYBRIDIZATION, FLUORESCENCE; MEMBRANE PROTEINS; PHYSICAL CHROMOSOME MAPPING; SEX CHROMOSOMES; SILENE;

EMBRYOPHYTA; SILENE LATIFOLIA;

EID: 0037278243     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (61)

1. ATANASSOV, I., C. DELICHÈRE, D. A. FILATOV, D. CHARLESWORTH, I. NEGRUTJU et al., 2001 Analysis and evolution of two functional Y-linked loci in a plant sex chromosome system. Mol. Biol. Evol. 18: 2162-2168.
2. BARBACAR, N., S. HINNISDAELS, I. FARBOS, F. MONÉGER, A. LARDON et al., 1997 Isolation of early genes expressed in reproductive organs of the dioecious white campion (Silene latifolia) by subtraction cloning using an asexual mutant. Plant J. 12: 805-817.
3. BOEHNKE, M., K. LANGE and D. R. Cox, 1991 Statistical methods for multipoint radiation hybrid mapping. Am. J. Hum. Genet. 49: 1174-1188.
4. CHARLESWORTH, D., 2002 Plant sex determination and sex chromosomes. Heredity 88: 94-101.
5. CHARLESWORTH, D., and D. S. GUTTMAN, 1999 The evolution of dioecy and plant sex chromosome systems, pp. 25-50 in Sex Determination in Plants, edited by C. C. AINSWORTH. BIOS Scientific Publishers, Oxford.
6. CIUPERCESCU, D. D., J. VEUSKENS, A. MOURAS, D. YE, M. BRIQUET et al., 1990 Karyotyping Melandrium album, a dioecious plant with heteromorphic sex chromosomes. Genome: 33: 556-562.
7. DELBRIDGE, M. L., and J. A. M. GRAVES, 1999 Mammalian Y chromosome evolution and the male-specific functions of Y chromosome-borne genes. Rev. Reprod. 4: 101-109.
8. DELICHÈRE, C., J. VEUSKENS, M. HERNOULD, N. BARBACAR, A. MOURAS et al., 1999 SlY1, the first active gene cloned from a plant Y chromosome, encodes a WD-repeat protein. EMBO J. 18: 4169-4179.
9. DESEEUX, C., S. MAURICE, J. P. HENRY, B. LEJEUNE and P. H. GOUYON, 1996 Evolution of reproductive systems in the genus Silene. Proc. R. Soc. Lond. Ser. B 263: 409-414.
10. DONNISON, I. S., and S. GRANT, 1999 Male sex-specific DNA in Silene latifolia and other dioecious plant species, pp. 73-87 in Sex Determination in Plants, edited by C. C. AINSWORTH. BIOS Scientific Publishers, Oxford.
11. DONNISON, I. S., J. SIROKY, B. VYSKOT, H. SAEDLER and S. R. GRANT, 1996 Isolation of Y chromosome-specific sequences from Silene latifolia and mapping male sex-determining genes using representational difference analysis. Genetics 144: 1893-1901.
12. FARBOS, I., J. VEUSKENS, B. VYSKOT, M. OLIVEIRA, S. HINNISDAELS et al., 1999 Sexual dimorphism in white campion: deletion on the Y chromosome results in a floral asexual phenotype. Genetics 151: 1187-1196.
13. FILATOV, D. A., F. MONÉGER, I. NEGRUTIU and D. CHARLESWORTH, 2000 Low variability in a Y-linked plant gene and its implications for Y-chromosome evolution. Nature 404: 388-390.
14. FILATOV, D. A., V. LAPORTE, C. VITTE and D. CHARLESWORTH, 2001 DNA diversity in sex-linked and autosomal genes of the plant species Silene latifolia and Silene dioica. Mol. Biol. Evol. 18: 1442-1454.
15. GRABOWSKA-JOACHIMIAK, A., and A. JOACHIMIAK, 2002 C-banded karyotypes of two Silene species with heteromorphic sex chromosomes. Genome 45: 243-252.
16. GRANT, S., A. HOUBEN, B. VYSKOT, J. SIROKY, W. PAN et al., 1994a Genetics of sex determination in flowering plants. Dev. Genet. 15: 214-230.
17. GRANT, S., B. HUNKIRCHEN and H. SAEDLER, 1994b Developmental differences between male and female flowers in the dioecious plant Silene latifolia: Plant J 6: 471-480.
18. GRAVES, J. A. M., M. J. WAKEFIELD and R. TODER, 1998 The origin and evolution of the pseudoautosomal regions of the human sex chromosomes. Hum. Mol. Genet. 7: 1991-1996.
19. GUTTMAN, D. S., and D. CHARLESWORTH, 1998 An X-linked gene with a degenerate Y-linked homologue in a dioecious plant. Nature 393: 263-266.
20. HOWDEN, R., S. K. PARK, J. M. MOORE, J. ORME, U. GROSSNIKLAUS et al., 1998 Selection of T-DNA-tagged male and female gametophytic mutants by segregation distortion in Arabidopsis. Genetics 149: 621-631.
21. 1-ATPase deduced from full length cDNA. J. Biol. Chem. 265: 6079-6085.
22. LAGERCRANTZ, U., and T. AXELSSON, 2000 Rapid evolution of the CONSTANS LIKE genes in plants. Mol. Biol. Evol. 17:1499-1507.
23. LAHN, B. T., and D. C. PAGE, 1997 Functional coherence of the human Y chromosome. Science 278: 675-680.
24. LAHN, B. T., and D. C. PAGE, 1999a Four evolutionary strata on the human X chromosome. Science 286: 964-967.
25. LAHN, B. T., and D. C. PAGE, 1999b Retroposition of autosomal mRNA yielded testis-specific gene family on human Y chromosome. Nat. Genet. 21: 429-433.
26. LAHN, B. T., N. M. PEARSON and K. JEGALIAN, 2001 The human Y chromosome, in the light of evolution. Nat. Rev. Genet. 2: 207-216.
27. LARDON, A., A. AGHMIR, S. GEORGIEV, F. MONÉGER and I. NEGRUTIU, 1999a The Y chromosome of white campion: sexual dimorphism and beyond, pp. 89-100 in Sex Determination in Plants, edited by C. C. AINSWORTH. BIOS Scientific Publishers, Oxford.
28. LARDON, A., S. GEORGIEV, A. AGHMIR, G. L. MERRER and I. NEGRUTIU, 1999b Sexual dimorphism in white campion: complex control of carpel number is revealed by Y chromosome deletions. Genetics 151: 1173-1185.
29. LEBEL-HARDENACK, S., D. YE, H. KOUTNIKOVA, H. SAEDLER and S. R. GRANT, 1997 Conserved expression of a TASSELSEED2 homolog in the tapetum of the dioecious Silene latifolia and Arabidopsis thaliana. Plant J. 12: 515-526.
30. LEBEL-HARDENACK, S., E. HAUSER, T. F. LAW, J. SCHMID and S. R. GRANT, 2002 Mapping of sex determination loci on the white campion (Silene latifolia) Y chromosome using amplified fragment length polymorphism. Genetics 160: 717-725.
31. Li, W. H., 1997 Principles of Molecular Evolution. Sinauer, Sunderland, MA.
32. LIANG, P., and A. B. PARDEE, 1992 Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 257: 967-971.
33. LIU, Y. G., and R. F. WHITTIER, 1995 Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking. Genomics 25: 674-681.
34. LIU, Y. G., N. MITSUKAWA, T. OOSUMI and R. F. WHITTIER, 1995 Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J. 8: 457-463.
35. 1-ATP synthase from sweet potato in transgenic tobacco plants and cells. Plant Cell Physiol. 40: 866-873.
36. MARTIN, K. J., and A. B. PARDEE, 1999 Principles of differential display. Methods Enzymol. 303: 234-258.
37. MATSUNAGA, S., and S. KAWANO, 2001 Sex determination by sex chromosomes in dioecious plants. Plant Biol. 3: 481-488.
38. MATSUNAGA, S., S. KAWANO, H. TAKANO, H. UCHIDA, A. SAKAI et al., 1996 Isolation and developmental expression of male reproductive organ-specific genes in a dioecious campion, Melandrium album (Silene latifolia). Plant J. 10: 679-689.
39. MATSUNAGA, S., S. KAWANO and T. KUROIWA, 1997 MROS1, a male stamen-specific gene in the dioecious campion Silene latifolia is expressed in mature pollen. Plant Cell Physiol. 38: 499-502.
40. MONÉGER, F., N. BARBACAR and I. NEGRUTIU, 2000 Dioecious Silene at the X-road: the reasons Y. Sex. Plant Reprod. 12: 245-249.
41. 1-ATP-ase. J. Biol. Chem. 267: 72-76.
42. NAKAO, S., S. MATSUNAGA, A. SAKAI, T. KUROIWA and S. KAWANO, 2002 RAPD isolation of a Y chromosome specific ORF in a dioecious plant, Silene latifolia. Genome 45: 413-420.
43. NEGRUTIU, I., B. VYSKOT, N. BARBAGAR, S. GEORGIEV and F. MONÉGER, 2001 Dioecious plants. A key to the early events of sex chromosome evolution. Plant Physiol. 127: 1418-1424.
44. PRESCOTT, M., N. C. BUSH, P. NAGLEY and R. J. DEVENISH, 1994 Properties of yeast cells depleted of the OSCP subunit of mitochondrial ATP synthase by regulated expression of the ATP5 gene. Biochem. Mol. Biol. Int. 34: 789-799.
45. ROBERTSON, S. E., Y. LI, C. P. SCUTT, M. E. WILLIS and P. M. GILMARTIN, 1997 Spatial expression dynamics of Men-9 delineate the third floral whorl in male and female flowers of dioecious Silene latifolia. Plant J. 12: 155-168.
46. ROZAS, J., and R. ROZAS, 1999 DnaSP version 3.0: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15: 174-175.
47. SAMBROOK, J., E. F. FRITSCH and T. MANIATIS, 1989 Molecular Cloning: A Laboratory Manual, Ed. 2. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
48. SAXENA, R., L. G. BROWN, T. HAWKINS, R. K. ALAGAPPAN, H. SKALETSKY et al., 1996 The DAZ gene cluster on the human Y chromosome arose from an autosomal gene that was transposed, repeatedly amplified and pruned. Nat. Genet. 14: 292-299.
49. SCUTT, C. P., Y. LI, S. E. ROBERTSON, M. E. WILLIS and P. M. GILMARTIN, 1997 Sex determination in dioecious Silene latifolia: effects of the Y chromosome and the parasitic smut fungus (Ustilago violacea) on gene expression during flower development. Plant Physiol. 114: 969-979.
50. SCUTT, C. P., T. JENKINS, M. FURUYA and P. M. GILMARTIN, 2002 Male specific genes from dioecious white campion identified by fluorescent differential display. Plant Cell Physiol. 43: 563-572.
51. SIROKY J., M. R. CASTIGLIONE and B. VYSKOT, 1998 DNA methylation patterns of Melandrium album chromosomes. Chromosome Res. 6: 441-446.
52. SIROKY, J., J. HODURKOVA, I. NEGRUTIU and B. VYSKOT, 1999 Functional and structural chromosome analyses in autotetraploid Silene latifolia. Ann. Bot. 84: 633-638.
53. SIROKY, J., M. LYSAK, J. DOLEZEL, E. KEJNOVSKY and B. VYSKOT, 2001 Heterogeneity of rDNA distribution and genome size in Silene spp. Chromosome Res. 9: 387-393.
54. TERAUCHI, R., and G. KAHL, 2000 Rapid isolation of promoter sequences by TAIL-PCR: the 5′-flanking regions of Pal and Pgi genes from yams (Dioscorea). Mol. Gen. Genet. 263: 554-560.
55. UH, M., D. JONES and D. M. MUELLER, 1990 The gene coding for the yeast oligomycin sensitivity-conferring protein. J. Biol. Chem. 265: 19047-19052.
56. VYSKOT, B., 1999 The role of DNA methylation in plant reproductive development, pp. 101-120 in Sex Determination in Plants, edited by C. C. AINSWORTH. BIOS Scientific Publishers, Oxford.
57. VYSKOT, B., A. ARAYA, J. VEUSKENS, I. NEGRUTIU and A. MOURAS, 1993 DNA methylation of sex chromosomes in a dioecious plant, Melandrium album. Mol. Gen. Genet. 239: 219-224.
58. 0-ATPases. FEBS Lett. 346: 39-43.
59. WESTERGAARD, M., 1958 The mechanism of sex determination in dioecious plants. Adv. Genet. 9: 217-281.
60. 0). Biophys. Chem. 68: 95-102.
61. YE, D., M. OLIVEIRA, J. VEUSKENS, Y. WU, P. INSTALLE et al., 1991 Sex determination in the dioecious Melandrium. The X/Y chromosome system allows complementary cloning strategies. Plant Sci. 80: 93-106.