-
1
-
-
14444275279
-
DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs
-
Wada,T., Takagi,T., Yamaguchi,Y., Ferdous,A., Imai,T., Hirose,S., Sugimoto,S., Yano,K., Hartzog,G.A., Winston,F. et al. (1998) DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs. Genes Dev. 12, 343-356.
-
(1998)
Genes Dev.
, vol.12
, pp. 343-356
-
-
Wada, T.1
Takagi, T.2
Yamaguchi, Y.3
Ferdous, A.4
Imai, T.5
Hirose, S.6
Sugimoto, S.7
Yano, K.8
Hartzog, G.A.9
Winston, F.10
-
2
-
-
0032534814
-
Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro
-
Wada,T., Takagi,T., Yamaguchi,Y., Watanabe,D. and Handa,H. (1998) Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro. EMBO J., 17, 7395-7403.
-
(1998)
EMBO J.
, vol.17
, pp. 7395-7403
-
-
Wada, T.1
Takagi, T.2
Yamaguchi, Y.3
Watanabe, D.4
Handa, H.5
-
3
-
-
0033515521
-
NELF, a multisubunit complex containing RD, cooperates with DSIF to repress RNA polymerase II elongation
-
Yamaguchi,Y., Takagi,T., Wada,T., Yano,K., Furuya,A., Sugimoto,S., Hasegawa,J. and Handa,H. (1999) NELF, a multisubunit complex containing RD, cooperates with DSIF to repress RNA polymerase II elongation. Cell, 97, 41-51.
-
(1999)
Cell
, vol.97
, pp. 41-51
-
-
Yamaguchi, Y.1
Takagi, T.2
Wada, T.3
Yano, K.4
Furuya, A.5
Sugimoto, S.6
Hasegawa, J.7
Handa, H.8
-
4
-
-
0036232590
-
Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA
-
Yamaguchi,Y., Inukai,N., Narita,T., Wada,T. and Handa,H. (2002) Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA. Mol. Cell. Biol., 22, 2918-2927.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 2918-2927
-
-
Yamaguchi, Y.1
Inukai, N.2
Narita, T.3
Wada, T.4
Handa, H.5
-
5
-
-
0035116375
-
SPT genes: Key players in the regulation of transcription, chromatin structure and other cellular processes
-
Yamaguchi,Y., Narita,T., Inukai,N., Wada,T. and Handa,H. (2001) SPT genes: Key players in the regulation of transcription, chromatin structure and other cellular processes. J. Biochem., 129, 185-191.
-
(2001)
J. Biochem.
, vol.129
, pp. 185-191
-
-
Yamaguchi, Y.1
Narita, T.2
Inukai, N.3
Wada, T.4
Handa, H.5
-
6
-
-
0034175631
-
P-TEFb kinase recruitment and function at heat shock loci
-
Lis,J.T., Mason,P., Peng,J., Price,D.H. and Werner,J. (2000) P-TEFb kinase recruitment and function at heat shock loci. Genes Dev., 14, 792-803.
-
(2000)
Genes Dev.
, vol.14
, pp. 792-803
-
-
Lis, J.T.1
Mason, P.2
Peng, J.3
Price, D.H.4
Werner, J.5
-
7
-
-
0033978121
-
Tat competes with CIITA for the binding to P-TEFb and blocks the expression of MHC class II genes in HIV infection
-
Kanazawa,S., Okamoto,T. and Peterlin,B.M. (2000) Tat competes with CIITA for the binding to P-TEFb and blocks the expression of MHC class II genes in HIV infection. Immunity, 12, 61-70.
-
(2000)
Immunity
, vol.12
, pp. 61-70
-
-
Kanazawa, S.1
Okamoto, T.2
Peterlin, B.M.3
-
8
-
-
0034741714
-
NF-kappaB binds P-TEFb to stimulate transcriptional elongation by RNA polymerase II
-
Barboric,M., Nissen,R.M., Kanazawa,S., Jabrane-Ferrat,N. and Peterlin,B.M. (2001) NF-kappaB binds P-TEFb to stimulate transcriptional elongation by RNA polymerase II. Mol. Cell, 8, 327-337.
-
(2001)
Mol. Cell
, vol.8
, pp. 327-337
-
-
Barboric, M.1
Nissen, R.M.2
Kanazawa, S.3
Jabrane-Ferrat, N.4
Peterlin, B.M.5
-
9
-
-
0037131186
-
Myc recruits P-TEFB to mediate the final step in the transcriptional activation of the cad promoter
-
Eberhardy,S.R. and Farnham,P.J. (2002) Myc recruits P-TEFB to mediate the final step in the transcriptional activation of the cad promoter. J. Biol. Chem., 277, 40156-40162.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 40156-40162
-
-
Eberhardy, S.R.1
Farnham, P.J.2
-
10
-
-
0037609009
-
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila
-
Wu,C.H., Yamaguchi,Y., Benjamin,L.R., Horvat-Gordon,M., Washinsky,J., Enerly,E., Larsson,J., Lambertsson,A., Handa,H. and Gilmour,D. (2003) NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila. Genes Dev., 17, 1402-1414.
-
(2003)
Genes Dev.
, vol.17
, pp. 1402-1414
-
-
Wu, C.H.1
Yamaguchi, Y.2
Benjamin, L.R.3
Horvat-Gordon, M.4
Washinsky, J.5
Enerly, E.6
Larsson, J.7
Lambertsson, A.8
Handa, H.9
Gilmour, D.10
-
11
-
-
0142123203
-
Transcription factor and polymerase recruitment, modification, and movement on dhsp70 in vivo in the minutes following heat shock
-
Boehm,A.K., Saunders,A., Werner,J. and Lis,J.T. (2003) Transcription factor and polymerase recruitment, modification, and movement on d hsp70 in vivo in the minutes following heat shock. Mol. Cell. Biol., 23, 7628-7637.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 7628-7637
-
-
Boehm, A.K.1
Saunders, A.2
Werner, J.3
Lis, J.T.4
-
12
-
-
4444368456
-
Attenuation of estrogen receptor alpha-mediated transcription through estrogen-stimulated recruitment of a negative elongation factor
-
Aiyar,S.E., Sun,J.L., Blair,A.L., Moskaluk,C.A., Lu,Y.Z., Ye,Q.N., Yamaguchi,Y., Mukherjee,A., Ren,D.M., Handa,H. et al. (2004) Attenuation of estrogen receptor alpha-mediated transcription through estrogen-stimulated recruitment of a negative elongation factor. Genes Dev., 18, 2134-2146.
-
(2004)
Genes Dev.
, vol.18
, pp. 2134-2146
-
-
Aiyar, S.E.1
Sun, J.L.2
Blair, A.L.3
Moskaluk, C.A.4
Lu, Y.Z.5
Ye, Q.N.6
Yamaguchi, Y.7
Mukherjee, A.8
Ren, D.M.9
Handa, H.10
-
13
-
-
0035834647
-
A highly purified RNA polymerase II elongation control system
-
Renner,D.B., Yamaguchi,Y., Wada,T., Handa,H. and Price,D.H. (2001) A highly purified RNA polymerase II elongation control system. J. Biol. Chem., 276, 42601-42609.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 42601-42609
-
-
Renner, D.B.1
Yamaguchi, Y.2
Wada, T.3
Handa, H.4
Price, D.H.5
-
14
-
-
0342748478
-
Domains in the SPT5 protein that modulate its transcriptional regulatory properties
-
Ivanov,D., Kwak,Y.T., Guo,J. and Gaynor,R.B. (2000) Domains in the SPT5 protein that modulate its transcriptional regulatory properties. Mol. Cell. Biol., 20, 2970-2983.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 2970-2983
-
-
Ivanov, D.1
Kwak, Y.T.2
Guo, J.3
Gaynor, R.B.4
-
15
-
-
0346095303
-
Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element
-
Fujinaga,K., Irwin,D., Huang,Y., Taube,R., Kurosu,T. and Peterlin,B.M. (2004) Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element. Mol. Cell. Biol., 24, 787-795.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 787-795
-
-
Fujinaga, K.1
Irwin, D.2
Huang, Y.3
Taube, R.4
Kurosu, T.5
Peterlin, B.M.6
-
16
-
-
1642441939
-
Coordination of transcription, RNA processing, and surveillance by P-TEFb kinase on heat shock genes
-
Ni,Z., Schwartz,B.E., Werner,J., Suarez,J.R. and Lis,J.T. (2004) Coordination of transcription, RNA processing, and surveillance by P-TEFb kinase on heat shock genes. Mol. Cell, 13, 55-65.
-
(2004)
Mol. Cell
, vol.13
, pp. 55-65
-
-
Ni, Z.1
Schwartz, B.E.2
Werner, J.3
Suarez, J.R.4
Lis, J.T.5
-
17
-
-
2442681755
-
Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II
-
Mandal,S.S., Chu,C., Wada,T., Handa,H., Shatkin,A.J. and Reinberg,D. (2004) Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II. Proc. Natl Acad. Sci. USA, 101, 7572-7577.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 7572-7577
-
-
Mandal, S.S.1
Chu, C.2
Wada, T.3
Handa, H.4
Shatkin, A.J.5
Reinberg, D.6
-
18
-
-
0037371682
-
Human transcription elongation factor NELF: Identification of novel subunits and reconstitution of the functionally active complex
-
Narita,T., Yamaguchi,Y., Yano,K., Sugimoto,S., Chanarat,S., Wada,T., Kim,D.K., Hasegawa,J., Omori,M., Inukai,N. et al. (2003) Human transcription elongation factor NELF: Identification of novel subunits and reconstitution of the functionally active complex. Mol. Cell. Biol., 23, 1863-1873.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 1863-1873
-
-
Narita, T.1
Yamaguchi, Y.2
Yano, K.3
Sugimoto, S.4
Chanarat, S.5
Wada, T.6
Kim, D.K.7
Hasegawa, J.8
Omori, M.9
Inukai, N.10
-
19
-
-
0024210345
-
Vectors for Drosophila P-element-mediated transformation and tissue culture transfection
-
Thummel,C.S., Boulet,A.M. and Lipshitz,H.D. (1988) Vectors for Drosophila P-element-mediated transformation and tissue culture transfection. Gene, 74, 445-456.
-
(1988)
Gene
, vol.74
, pp. 445-456
-
-
Thummel, C.S.1
Boulet, A.M.2
Lipshitz, H.D.3
-
21
-
-
2542489173
-
Analysis of Pol II elongation complexes by native gel electrophoresis: Evidence for a novel CTD-mediated termination mechanism
-
Zhang,Z., Wu,C.H. and Gilmour,D.S. (2004) Analysis of Pol II elongation complexes by native gel electrophoresis: Evidence for a novel CTD-mediated termination mechanism. J. Biol. Chem., 279, 23223 23228.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 23223-23228
-
-
Zhang, Z.1
Wu, C.H.2
Gilmour, D.S.3
-
22
-
-
0024276891
-
Transcription factors that activate the Ultrabithorax promoter in developmentally staged extracts
-
Biggin,M.D. and Tjian,R. (1988) Transcription factors that activate the Ultrabithorax promoter in developmentally staged extracts. Cell, 53, 699-711.
-
(1988)
Cell
, vol.53
, pp. 699-711
-
-
Biggin, M.D.1
Tjian, R.2
-
23
-
-
0000647604
-
Factors involved in specific transcription by human RNA polymerase II: Analysis by a rapid and quantitative in vitro assay
-
Sawadogo,M. and Roeder,R.G. (1985) Factors involved in specific transcription by human RNA polymerase II: Analysis by a rapid and quantitative in vitro assay. Proc. Natl Acad. Sci. USA, 82, 4394-4398.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 4394-4398
-
-
Sawadogo, M.1
Roeder, R.G.2
-
24
-
-
0032519352
-
Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter
-
Benjamin,L.R. and Gilmour,D.S. (1998) Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter. Nucleic Acids Res., 26, 1051-1055.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1051-1055
-
-
Benjamin, L.R.1
Gilmour, D.S.2
-
25
-
-
0029791353
-
Analyses of promoter-proximal pausing by RNA polymerase II on the hsp70 heat shock gene promoter in a Drosophila nuclear extract
-
Li,B., Weber,J.A., Chen,Y., Greenleaf A.L. and Gilmour,D.S. (1996) Analyses of promoter-proximal pausing by RNA polymerase II on the hsp70 heat shock gene promoter in a Drosophila nuclear extract. Mol. Cell. Biol., 16, 5433-5443.
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 5433-5443
-
-
Li, B.1
Weber, J.A.2
Chen, Y.3
Greenleaf, A.L.4
Gilmour, D.S.5
-
26
-
-
0034881496
-
Mediator, not holoenzyme, is directly recruited to the heat shock promoter by HSF upon heat shock
-
Park,J.M., Werner,J., Kim,J.M., Lis,J.T. and Kim,Y.J. (2001) Mediator, not holoenzyme, is directly recruited to the heat shock promoter by HSF upon heat shock. Mol. Cell, 8, 9-19.
-
(2001)
Mol. Cell
, vol.8
, pp. 9-19
-
-
Park, J.M.1
Werner, J.2
Kim, J.M.3
Lis, J.T.4
Kim, Y.J.5
-
27
-
-
0026440184
-
Promoter melting and TFIID complexes on Drosophila genes in vivo
-
Giardina,C., Perez-Riba,M. and Lis,J.T. (1992) Promoter melting and TFIID complexes on Drosophila genes in vivo. Genes Dev., 6, 2190-2200.
-
(1992)
Genes Dev.
, vol.6
, pp. 2190-2200
-
-
Giardina, C.1
Perez-Riba, M.2
Lis, J.T.3
-
28
-
-
0030982769
-
Molecular architecture of the hsp70 promoter after deleting the TATA box or the upstream regulatory region
-
Weber,J.A., Taxman,D.J., Lu,Q. and Gilmour,D.S. (1997) Molecular architecture of the hsp70 promoter after deleting the TATA box or the upstream regulatory region. Mol. Cell. Biol., 17, 3799-3808.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 3799-3808
-
-
Weber, J.A.1
Taxman, D.J.2
Lu, Q.3
Gilmour, D.S.4
-
29
-
-
0026049391
-
RNA polymerase II pauses at the 5′ end of the transcriptionally induced Drosophila hsp70 gene
-
O'Brien,T. and Lis,J.T. (1991) RNA polymerase II pauses at the 5′ end of the transcriptionally induced Drosophila hsp70 gene. Mol. Cell. Biol., 11, 5285-5290.
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 5285-5290
-
-
O'Brien, T.1
Lis, J.T.2
-
30
-
-
0042830962
-
Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo
-
Saunders,A., Werner,J., Andrulis,E.D., Nakayama,T., Hirose,S., Reinberg,D. and Lis,J.T. (2003) Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo. Science, 301 1094-1096.
-
(2003)
Science
, vol.301
, pp. 1094-1096
-
-
Saunders, A.1
Werner, J.2
Andrulis, E.D.3
Nakayama, T.4
Hirose, S.5
Reinberg, D.6
Lis, J.T.7
-
31
-
-
0029042691
-
Distribution of GAGA protein on Drosophila genes in vivo
-
O'Brien,T., Wilkins,R.C., Giardina,C. and Lis,J.T. (1995) Distribution of GAGA protein on Drosophila genes in vivo. Genes Dev., 9, 1098-1110.
-
(1995)
Genes Dev.
, vol.9
, pp. 1098-1110
-
-
O'Brien, T.1
Wilkins, R.C.2
Giardina, C.3
Lis, J.T.4
-
32
-
-
0024453603
-
Drosophila nuclear proteins bind to regions of alternating C and T residues in gene promoters
-
Gilmour,D.S., Thomas,G.H. and Elgin,S.C.R. (1989) Drosophila nuclear proteins bind to regions of alternating C and T residues in gene promoters. Science, 245, 1487-1490.
-
(1989)
Science
, vol.245
, pp. 1487-1490
-
-
Gilmour, D.S.1
Thomas, G.H.2
Elgin, S.C.R.3
-
33
-
-
0029163040
-
Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing
-
Rasmussen,E.B. and Lis,J.T. (1995) Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing. J. Mol. Biol., 252, 522-535.
-
(1995)
J. Mol. Biol.
, vol.252
, pp. 522-535
-
-
Rasmussen, E.B.1
Lis, J.T.2
-
34
-
-
0028822276
-
HSF access to heat shock elements in vivo depends critically on promoter architecture defined by GAGA factor, TFIID, and RNA polymerase II binding sites
-
Shopland,L.S., Hirayoshi,K., Fernandes,M. and Lis,J.T. (1995) HSF access to heat shock elements in vivo depends critically on promoter architecture defined by GAGA factor, TFIID, and RNA polymerase II binding sites. Genes Dev., 9, 2756-2769.
-
(1995)
Genes Dev.
, vol.9
, pp. 2756-2769
-
-
Shopland, L.S.1
Hirayoshi, K.2
Fernandes, M.3
Lis, J.T.4
-
35
-
-
0026513698
-
DNA sequence requirements for generating paused polymerase at the start of hsp70
-
Lee,H., Kraus,K.W., Wolfner,M.F. and Lis,J.T. (1992) DNA sequence requirements for generating paused polymerase at the start of hsp70. Genes Dev., 6, 284-295.
-
(1992)
Genes Dev.
, vol.6
, pp. 284-295
-
-
Lee, H.1
Kraus, K.W.2
Wolfner, M.F.3
Lis, J.T.4
-
36
-
-
0025166038
-
Postinitiation transcriptional control in Drosophila melanogaster
-
Rougvie,A.E. and Lis,J.T. (1990) Postinitiation transcriptional control in Drosophila melanogaster. Mol. Cell. Biol., 10, 6041-6045.
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 6041-6045
-
-
Rougvie, A.E.1
Lis, J.T.2
-
37
-
-
6644222520
-
Stimulation of RNA polymerase II elongation by hepatitis delta antigen
-
Yamaguchi,Y., Filipovska,J., Yano,K., Furuya,A., Inukai,N., Narita,T., Wada,T., Sugimoto,S., Konarska,M.M. and Handa,H. (2001) Stimulation of RNA polymerase II elongation by hepatitis delta antigen. Science, 293, 124-127.
-
(2001)
Science
, vol.293
, pp. 124-127
-
-
Yamaguchi, Y.1
Filipovska, J.2
Yano, K.3
Furuya, A.4
Inukai, N.5
Narita, T.6
Wada, T.7
Sugimoto, S.8
Konarska, M.M.9
Handa, H.10
-
38
-
-
0036753427
-
Functional coupling of capping and transcription of mRNA
-
Moteki,S. and Price,D. (2002) Functional coupling of capping and transcription of mRNA. Mol. Cell, 10, 599-609.
-
(2002)
Mol. Cell
, vol.10
, pp. 599-609
-
-
Moteki, S.1
Price, D.2
|