The new bacterial cell biology: Moving parts and subcellular architecture

Cell

Volumn 120, Issue 5, 2005, Pages 577-586

  Gitai, Zemer ^a,b  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b PRINCETON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; CYTOSKELETON PROTEIN;

BACILLUS SUBTILIS; BACTERIAL CELL; BACTERIAL VIRULENCE; CAULOBACTER CRESCENTUS; CELL CYCLE; CELL DIFFERENTIATION; CELL SPECIFICITY; CYTOARCHITECTURE; CYTOLOGY; CYTOSKELETON; ESCHERICHIA COLI; EUKARYOTIC CELL; MOLECULAR DYNAMICS; NONHUMAN; PRIORITY JOURNAL; PROKARYOTIC CELL; PROTEIN LOCALIZATION; REVIEW; SEQUENCE HOMOLOGY; SHIGELLA FLEXNERI; SIGNAL TRANSDUCTION;

BACTERIA (MICROORGANISMS); EUKARYOTA; PROKARYOTA;

EID: 14844304655     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cell.2005.02.026     Document Type: Review

References (86)

1. D.A. Agard, Y. Hiraoka, P. Shaw, and J.W. Sedat Fluorescence microscopy in three dimensions Methods Cell Biol. 30 1989 353 377
2. P. Aldridge, and K.T. Hughes How and when are substrates selected for type III secretion? Trends Microbiol. 9 2001 209 214
3. M.R. Alley, J.R. Maddock, and L. Shapiro Polar localization of a bacterial chemoreceptor Genes Dev. 6 1992 825 836
4. N. Ausmees, J.R. Kuhn, and C. Jacobs-Wagner The bacterial cytoskeleton: an intermediate filament-like function in cell shape Cell 115 2003 705 713
5. B.L. Bassler Small talk. Cell-to-cell communication in bacteria Cell 109 2002 421 424
6. S. Ben-Yehuda, and R. Losick Asymmetric cell division in B. subtilis involves a spiral-like intermediate of the cytokinetic protein FtsZ Cell 109 2002 257 266
7. E.F. Bi, and J. Lutkenhaus FtsZ ring structure associated with division in Escherichia coli Nature 354 1991 161 164
8. B. Blaylock, X. Jiang, A. Rubio, C.P. Moran Jr., and K. Pogliano Zipper-like interaction between proteins in adjacent daughter cells mediates protein localization Genes Dev. 18 2004 2916 2928
9. Y.V. Brun, and L.J. Shimkets Prokaryotic Development 2000 ASM Press Washington, DC
10. N. Campo, H. Tjalsma, G. Buist, D. Stepniak, M. Meijer, M. Veenhuis, M. Westermann, J.P. Muller, S. Bron, and J. Kok Subcellular sites for bacterial protein export Mol. Microbiol. 53 2004 1583 1599
11. W.A. Carrington, R.M. Lynch, E.D. Moore, G. Isenberg, K.E. Fogarty, and F.S. Fay Superresolution three-dimensional images of fluorescence in cells with minimal light exposure Science 268 1995 1483 1487
12. L.W. Cheng, and O. Schneewind Type III machines of Gram-negative bacteria: delivering the goods Trends Microbiol. 8 2000 214 220
13. P. Cossart, and P.J. Sansonetti Bacterial invasion: the paradigms of enteroinvasive pathogens Science 304 2004 242 248
14. R.A. Daniel, and J. Errington Control of cell morphogenesis in bacteria: two distinct ways to make a rod-shaped cell Cell 113 2003 767 776
15. J. Dworkin, and R. Losick Differential gene expression governed by chromosomal spatial asymmetry Cell 107 2001 339 346
16. J. Errington Regulation of endospore formation in Bacillus subtilis Nat. Rev. Microbiol. 1 2003 117 126
17. J. Errington, R.A. Daniel, and D.J. Scheffers Cytokinesis in bacteria Microbiol. Mol. Biol. Rev. 67 2003 52 65
18. O. Espeli, P. Nurse, C. Levine, C. Lee, and K.J. Marians SetB: an integral membrane protein that affects chromosome segregation in Escherichia coli Mol. Microbiol. 50 2003 495 509
19. R.M. Figge, A.V. Divakaruni, and J.W. Gober MreB, the cell shape-determining bacterial actin homologue, co-ordinates cell wall morphogenesis in Caulobacter crescentus Mol. Microbiol. 51 2004 1321 1332
20. Formstone, A. and Errington, J. (2004). A magnesium-dependent mreB null mutant: implications for the role of mreB in Bacillus subtilis. Mol. Microbiol. Published online December, 2004. 10.1111/j.1365-2958.2005.04506.x.
21. D.C. Fung, and J.A. Theriot Imaging techniques in microbiology Curr. Opin. Microbiol. 1 1998 346 351
22. E.C. Garner, C.S. Campbell, and R.D. Mullins Dynamic instability in a DNA-segregating prokaryotic actin homolog Science 306 2004 1021 1025
23. K. Gerdes, J. Moller-Jensen, and R. Bugge Jensen Plasmid and chromosome partitioning: surprises from phylogeny Mol. Microbiol. 37 2000 455 466
24. K. Gerdes, J. Moller-Jensen, G. Ebersbach, T. Kruse, and K. Nordstrom Bacterial mitotic machineries Cell 116 2004 359 366
25. K.A. Gibbs, D.D. Isaac, J. Xu, R.W. Hendrix, T.J. Silhavy, and J.A. Theriot Complex spatial distribution and dynamics of an abundant Escherichia coli outer membrane protein, LamB Mol. Microbiol. 53 2004 1771 1783
26. Z. Gitai, N. Dye, and L. Shapiro An actin-like gene can determine cell polarity in bacteria Proc. Natl. Acad. Sci. USA 101 2004 8643 8648
27. Z. Gitai, N. Dye, A. Reisenauer, M. Wachi, and L. Shapiro MreB actin-mediated segregation of a specific region of a bacterial chromosome Cell 120 2005 329 341
28. M.B. Goldberg, O. Barzu, C. Parsot, and P.J. Sansonetti Unipolar localization and ATPase activity of IcsA, a Shigella flexneri protein involved in intracellular movement J. Bacteriol. 175 1993 2189 2196
29. J.W. Golden, and H.S. Yoon Heterocyst development in Anabaena Curr. Opin. Microbiol. 6 2003 557 563
30. M. Howard, A.D. Rutenberg, and S. de Vet Dynamic compartmentalization of bacteria: accurate division in E. coli Phys. Rev. Lett. 87 2001 278102
31. Z. Hu, and J. Lutkenhaus Topological regulation of cell division in Escherichia coli involves rapid pole to pole oscillation of the division inhibitor MinC under the control of MinD and MinE Mol. Microbiol. 34 1999 82 90
32. Z. Hu, and J. Lutkenhaus Analysis of MinC reveals two independent domains involved in interaction with MinD and FtsZ J. Bacteriol. 182 2000 3965 3971
33. Z. Hu, A. Mukherjee, S. Pichoff, and J. Lutkenhaus The MinC component of the division site selection system in Escherichia coli interacts with FtsZ to prevent polymerization Proc. Natl. Acad. Sci. USA 96 1999 14819 14824
34. Z. Hu, E.P. Gogol, and J. Lutkenhaus Dynamic assembly of MinD on phospholipid vesicles regulated by ATP and MinE Proc. Natl. Acad. Sci. USA 99 2002 6761 6766
35. K.C. Huang, Y. Meir, and N.S. Wingreen Dynamic structures in Escherichia coli: spontaneous formation of MinE rings and MinD polar zones Proc. Natl. Acad. Sci. USA 100 2003 12724 12728
36. R.B. Jensen, S.C. Wang, and L. Shapiro Dynamic localization of proteins and DNA during a bacterial cell cycle Nat. Rev. Mol. Cell Biol. 3 2002 167 176
37. L.J. Jones, R. Carballido-Lopez, and J. Errington Control of cell shape in bacteria: helical, actin-like filaments in Bacillus subtilis Cell 104 2001 913 922
38. D. Kaiser Building a multicellular organism Annu. Rev. Genet. 35 2001 103 123
39. D. Kaiser Signaling in myxobacteria Annu. Rev. Microbiol. 58 2004 75 98
40. C. Kocks, R. Hellio, P. Gounon, H. Ohayon, and P. Cossart Polarized distribution of Listeria monocytogenes surface protein ActA at the site of directional actin assembly J. Cell Sci. 105 1993 699 710
41. A. Komeili, H. Vali, T.J. Beveridge, and D.K. Newman Magnetosome vesicles are present before magnetite formation, and MamA is required for their activation Proc. Natl. Acad. Sci. USA 101 2004 3839 3844
42. K. Kruse A dynamic model for determining the middle of Escherichia coli Biophys. J. 82 2002 618 627
43. T. Kruse, J. Moller-Jensen, A. Lobner-Olesen, and K. Gerdes Dysfunctional MreB inhibits chromosome segregation in Escherichia coli EMBO J. 22 2003 5283 5292
44. T. Kruse, J. Bork-Jensen, and K. Gerdes The morphogenetic MreBCD proteins of Escherichia coli form an essential membrane-bound complex Mol. Microbiol. 55 2005 78 89
45. L.L. Lackner, D.M. Raskin, and P.A. de Boer ATP-dependent interactions between Escherichia coli Min proteins and the phospholipid membrane in vitro J. Bacteriol. 185 2003 735 749
46. I.F. Lau, S.R. Filipe, B. Soballe, O.A. Okstad, F.X. Barre, and D.J. Sherratt Spatial and temporal organization of replicating Escherichia coli chromosomes Mol. Microbiol. 49 2003 731 743
47. J. Lowe, and L.A. Amos Crystal structure of the bacterial cell-division protein FtsZ Nature 391 1998 203 206
48. J. Lowe, F. van den Ent, and L.A. Amos Molecules of the bacterial cytoskeleton Annu. Rev. Biophys. Biomol. Struct. 33 2004 177 198
49. J. Lutkenhaus, and S.G. Addinall Bacterial cell division and the Z ring Annu. Rev. Biochem. 66 1997 93 116
50. J.R. Maddock, and L. Shapiro Polar location of the chemoreceptor complex in the Escherichia coli cell Science 259 1993 1717 1723
51. J.Y. Matroule, H. Lam, D.T. Burnette, and C. Jacobs-Wagner Cytokinesis monitoring during development; rapid pole-to-pole shuttling of a signaling protein by localized kinase and phosphatase in Caulobacter Cell 118 2004 579 590
52. H.H. McAdams, and L. Shapiro A bacterial cell-cycle regulatory network operating in time and space Science 301 2003 1874 1877
53. P.T. McGrath, P. Viollier, and H.H. McAdams Setting the pace: mechanisms tying Caulobacter cell-cycle progression to macroscopic cellular events Curr. Opin. Microbiol. 7 2004 192 197
54. H. Meinhardt, and P.A. de Boer Pattern formation in Escherichia coli: a model for the pole-to-pole oscillations of Min proteins and the localization of the division site Proc. Natl. Acad. Sci. USA 98 2001 14202 14207
55. E. Mileykovskaya, and W. Dowhan Visualization of phospholipid domains in Escherichia coli by using the cardiolipin-specific fluorescent dye 10-N-nonyl acridine orange J. Bacteriol. 182 2000 1172 1175
56. J. Moller-Jensen, J. Borch, M. Dam, R.B. Jensen, P. Roepstorff, and K. Gerdes Bacterial mitosis: ParM of plasmid R1 moves plasmid DNA by an actin-like insertional polymerization mechanism Mol. Cell 12 2003 1477 1487
57. H. Niki, Y. Yamaichi, and S. Hiraga Dynamic organization of chromosomal DNA in Escherichia coli Genes Dev. 14 2000 212 223
58. G. O'Toole, H.B. Kaplan, and R. Kolter Biofilm formation as microbial development Annu. Rev. Microbiol. 54 2000 49 79
59. C. Persson, R. Nordfelth, A. Holmstrom, S. Hakansson, R. Rosqvist, and H. Wolf-Watz Cell-surface-bound Yersinia translocate the protein tyrosine phosphatase YopH by a polarized mechanism into the target cell Mol. Microbiol. 18 1995 135 150
60. K. Pogliano, J. Pogliano, and E. Becker Chromosome segregation in Eubacteria Curr. Opin. Microbiol. 6 2003 586 593
61. D.M. Raskin, and P.A. de Boer MinDE-dependent pole-to-pole oscillation of division inhibitor MinC in Escherichia coli J. Bacteriol. 181 1999 6419 6424
62. D.M. Raskin, and P.A. de Boer Rapid pole-to-pole oscillation of a protein required for directing division to the middle of Escherichia coli Proc. Natl. Acad. Sci. USA 96 1999 4971 4976
63. J.R. Robbins, D. Monack, S.J. McCallum, A. Vegas, E. Pham, M.B. Goldberg, and J.A. Theriot The making of a gradient: IcsA (VirG) polarity in Shigella flexneri Mol. Microbiol. 41 2001 861 872
64. L. Romberg, and P.A. Levin Assembly dynamics of the bacterial cell division protein FTSZ: poised at the edge of stability Annu. Rev. Microbiol. 57 2003 125 154
65. J. Rosch, and M. Caparon A microdomain for protein secretion in Gram-positive bacteria Science 304 2004 1513 1515
66. A. Rubio, and K. Pogliano Septal localization of forespore membrane proteins during engulfment in Bacillus subtilis EMBO J. 23 2004 1636 1646
67. D.Z. Rudner, Q. Pan, and R.M. Losick Evidence that subcellular localization of a bacterial membrane protein is achieved by diffusion and capture Proc. Natl. Acad. Sci. USA 99 2002 8701 8706
68. K.R. Ryan, S. Huntwork, and L. Shapiro Recruitment of a cytoplasmic response regulator to the cell pole is linked to its cell cycle-regulated proteolysis Proc. Natl. Acad. Sci. USA 101 2004 7415 7420
69. J.A. Shapiro Thinking about bacterial populations as multicellular organisms Annu. Rev. Microbiol. 52 1998 81 104
70. L. Shapiro, H.H. McAdams, and R. Losick Generating and exploiting polarity in bacteria Science 298 2002 1942 1946
71. D.J. Sherratt Bacterial chromosome dynamics Science 301 2003 780 785
72. Y.L. Shih, T. Le, and L. Rothfield Division site selection in Escherichia coli involves dynamic redistribution of Min proteins within coiled structures that extend between the two cell poles Proc. Natl. Acad. Sci. USA 100 2003 7865 7870
73. H.J. Soufo, and P.L. Graumann Actin-like proteins MreB and Mbl from Bacillus subtilis are required for bipolar positioning of replication origins Curr. Biol. 13 2003 1916 1920
74. V. Sperandio, J.L. Mellies, W. Nguyen, S. Shin, and J.B. Kaper Quorum sensing controls expression of the type III secretion gene transcription and protein secretion in enterohemorrhagic and enteropathogenic Escherichia coli Proc. Natl. Acad. Sci. USA 96 1999 15196 15201
75. N.R. Stanley, and B.A. Lazazzera Environmental signals and regulatory pathways that influence biofilm formation Mol. Microbiol. 52 2004 917 924
76. P. Stragier, and R. Losick Molecular genetics of sporulation in Bacillus subtilis Annu. Rev. Genet. 30 1996 297 341
77. T. Takeda, T. Kawate, and F. Chang Organization of a sterol-rich membrane domain by cdc15p during cytokinesis in fission yeast Nat. Cell Biol. 6 2004 1142 1144
78. A.A. Teleman, P.L. Graumann, D.C. Lin, A.D. Grossman, and R. Losick Chromosome arrangement within a bacterium Curr. Biol. 8 1998 1102 1109
79. R.Y. Tsien Imagining imaging's future Nat. Rev. Mol. Cell Biol. Suppl 2003 SS16 SS21
80. F. van den Ent, L.A. Amos, and J. Lowe Prokaryotic origin of the actin cytoskeleton Nature 413 2001 39 44
81. F. van den Ent, J. Moller-Jensen, L.A. Amos, K. Gerdes, and J. Lowe F-actin-like filaments formed by plasmid segregation protein ParM EMBO J. 21 2002 6935 6943
82. M.J. van Hemert, G.E. Lamers, D.C. Klein, T.H. Oosterkamp, H.Y. Steensma, and G.P. van Heusden The Saccharomyces cerevisiae Fin1 protein forms cell cycle-specific filaments between spindle pole bodies Proc. Natl. Acad. Sci. USA 99 2002 5390 5393
83. P.H. Viollier, M. Thanbichler, P.T. McGrath, L. West, M. Meewan, H.H. McAdams, and L. Shapiro Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication Proc. Natl. Acad. Sci. USA 101 2004 9257 9262
84. C.D. Webb, A. Decatur, A. Teleman, and R. Losick Use of green fluorescent protein for visualization of cell-specific gene expression and subcellular protein localization during sporulation in Bacillus subtilis J. Bacteriol. 177 1995 5906 5911
85. J.S. Webb, M. Givskov, and S. Kjelleberg Bacterial biofilms: prokaryotic adventures in multicellularity Curr. Opin. Microbiol. 6 2003 578 585
86. Y. Yamaichi, and H. Niki migS, a cis-acting site that affects bipolar positioning of oriC on the Escherichia coli chromosome EMBO J. 23 2004 221 233