The glycine decarboxylase complex is not essential for the cyanobacterium Synechocystis sp. strain PCC 6803

Plant Biology

Volumn 7, Issue 1, 2005, Pages 15-22

  Hagemann, M ^a   Vinnemeier, J ^a,b   Oberpichler, I ^a,c   Boldt, R ^a   Bauwe, H ^a  

^a UNIVERSITY OF ROSTOCK   (Germany)

^b ROCHE DIAGNOSTICS GMBH   (Germany)

^c FREIE UNIVERSITÄT BERLIN   (Germany)

Author keywords

Cyanobacteria; Gene expression; Glycine resistance; Inorganic carbon; Mutation

Indexed keywords

GLYCINE CLEAVAGE SYSTEM; GLYCINE CLEAVAGE SYSTEM H PROTEIN; GLYCINE DEHYDROGENASE (DECARBOXYLATING); GLYCINE HYDROXYMETHYLTRANSFERASE; OXIDOREDUCTASE;

CYANOBACTERIUM;

ARTICLE; ENZYMOLOGY; GENE EXPRESSION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MUTATION; PHOTOSYNTHESIS; SYNECHOCYSTIS; TIME;

AMINO ACID OXIDOREDUCTASES; GENE EXPRESSION; GLYCINE DECARBOXYLASE COMPLEX; GLYCINE DECARBOXYLASE COMPLEX H-PROTEIN; GLYCINE DEHYDROGENASE (DECARBOXYLATING); GLYCINE HYDROXYMETHYLTRANSFERASE; MUTATION; PHOTOSYNTHESIS; SYNECHOCYSTIS; TIME FACTORS;

BACTERIA (MICROORGANISMS); CYANOBACTERIA; SYNECHOCYSTIS; SYNECHOCYSTIS SP.; SYNECHOCYSTIS SP. PCC 6803;

EID: 13844255945     PISSN: 14358603     EISSN: None     Source Type: Journal    
DOI: 10.1055/s-2004-830445     Document Type: Article

References (34)

1. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25, 3389-3402.
2. Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815.
3. Bauwe, H. and Kolukisaoglu, Ü. (2003) Genetic manipulation of glycine decarboxylation. Journal of Experimental Botany 54, 1523-1535.
4. Birmingham, B. C., Colman, J. R., and Colman, B. (1982) Measurement of photorespiration in algae. Plant Physiology 69, 259-262.
5. Codd, G. A. and Stewart W. D. P. (1973) Pathways of glycollate metabolism in the bluegreen alga Anabaena cylindrica. Archiv Mikrobiologie 94, 11-28.
6. Colman, B. (1989) Photosynthetic carbon assimilation and the suppression of photorespiration in the cyanobacteria. Aquatic Botany 34, 211-231.
7. Douce, R., Bourguignon, J., Neuburger, M., and Rebeille, F. (2001) The glycine decarboxylase system: a fascinating complex. Trends in Plant Science 6, 167-176.
8. Engels, A. and Pistorius, E. K. (1997) Characterization of a gene encoding dihydrolipoamide dehydrogenase of the cyanobacterium Synechocystis sp. strain PCC 6803. Microbiology 143, 3543-3553.
9. Geigenberger, P., Lerchl, J., Stitt, M., and Sonnewald, U. (1996) Phloem-specific expression of pyrophosphatase inhibits long distance transport of carbohydrates and amino acids in tobacco plants. Plant, Cell and Environment 19, 43-55.
10. Gollan, T., Schurr, U., and Schulze, E.-D. (1992) Stomatal response to drying soil in relation to changes in the xylem sap composition of Helianthus annuus I. The concentration of cations, anions and amino acids in and pH of the xylem sap. Plant, Cell and Environment 15, 551-559.
11. Goodner, B., Hinkle, G., Gattung, S., Miller, N., Blanchard, M., Qurollo, B., Goldman, B. S., Cao, Y., Askenazi, M., Halling, C., Mullin, L., Houmiel, K., Gordon, J., Vaudin, M., Iartchouk, O., Epp, A., Liu, F., Wollam, C., Allinger, M., Doughty, D., Scott, C., Lappas, C., Markelz, B., Flanagan, C., Crowell, C., Gurson, J., Lomo, C., Sear, C., Strub, G., Cielo, C., and Slater, S. (2001) Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58. Science 294, 2323-2328.
12. Hagemann, M., Schoor, A., Jeanjean, R., Zuther, E., and Joset, F. (1997) The stpA gene from Synechocystis sp. strain PCC 6803 encodes the glucosylglycerol-phosphate phosphatase involved in cyanobacterial osmotic response to salt shock. Journal of Bacteriology 179, 1727-1733.
13. Heineke, D., Bykova, N., Gardeström, P., and Bauwe, H. (2001) Metabolic response of potato plants to an antisense reduction of the P-protein of glycine decarboxylase. Planta 212, 880-887.
14. Huckauf, J., Nomura, C., Forchhammer, K., and Hagemann, M. (2000) Stress responses of Synechocystis sp. strain PCC 6803 mutants impaired in genes encoding putative alternative sigma factors. Microbiology 146, 2877-2889.
15. Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., Nakamura, Y., Miyajima, N., Hirosawa, M., Sugiura, M., Sasamoto, S., Kimura, S., Hosouchi, T., Matsuno, A., Muraki, A., Nakazaki, A., Nruo, K., Okumura, S., Shimpo, S., Takeuchi, C., Wada, T., Watanabe, A., Yamada, M., Yasuda, M., and Tabata, S. (1996) Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. II. Sequence determination of the entire genome and assignment of potential proteincoding regions. DNA Research 3, 109-136.
16. Kaplan, A., Schwarz, R., Lieman-Hurwitz, J., Ronen-Tarazi, M., and Reinhold, L. (1994) Physiological and molecular studies on the response of cyanobacteria to changes in the ambient inorganic carbon concentration. In The Molecular Biology of Cyanobacteria (Bryant, D. A., ed.), Dordrecht: Kluwer Academic Publishers, pp. 469-485.
17. Kopriva, S., Turner, S. R., Rawsthorne, S., and Bauwe, H. (1995) T-protein of the glycine decarboxylase multienzyme complex: evidence for partial similarity to formyltetrahydrofolate synthetase. Plant Molecular Biology 27, 1215-1220.
18. Kruger, N., Oppermann, F. B., Lorenzl, H., and Steinbüchel, A. (1994) Biochemical and molecular characterization of the Clostridium magnum acetoin dehydrogenase enzyme system. Journal of Bacteriology 176, 3614-3630.
19. Kunst, F., Ogasawara, N., Moszer, I., Albertini, A. M., Alloni, G., Azevedo, V., Bertero, M. G., Bessieres, P., Bolotin, A., Borchert, S., Borriss, R., Boursier, L., Brans, A., Braun, M., Brignell, S. C., Bron, S., Brouillet, S., Bruschi, C. V., Caldwell, B., Capuano, V., Carter, N. M., Choi, S. K., et al. (1997) The complete genome sequence of the Gram-positive bacterium Bacillus subtilis. Nature 390, 249-256
20. Martin, W., Rujan, T., Richly, E., Hansen, A., Cornelsen, S., Lins, T., Leister, D., Stoebe, B., Hasegawa, M., and Penny, D. (2002) Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proceedings of the National Academy of Sciences of the USA 99, 12246-12251.
21. 2-concentrating mechanism in the cyanobacterium Synechocystis sp. strain PCC6803. Plant Physiology 132, 218-229.
22. Ng, W. V., Kennedy, S. P., Mahairas, G. G., Berquist, B., Pan, M., Shukla, H. D., Lasky, S. R., Baliga, N., Thorsson, V., Sbrogna, J., Swartzell, S., Weir, D., Hall, J., Dahl, T. A., Welti, R., Goo, Y. A., Leithauser, B., Keller, K., Cruz, R., Danson, M. J., Hough, D. W., Maddocks, D. G., Jablonski, P. E., Krebs, M. P., Angevine, C. M., et al. (2000) Genome sequence of Halobacterium species NRC-1. Proceedings of the National Academy of Sciences of the USA 97, 12176-12181.
23. Quintero, M. J., Montesinos, M. L., Herrero, A., and Flores, E. (2001) Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence. Genome Research 11, 2034-2040.
24. Renström-Kellner, E. and Bergman, B. (1990) Glycolate metabolism in cyanobacteria. IV. Uptake, growth and metabolic pathways. Physiologia Plantarum 78, 285-292.
25. Rippka, R., Deruelles, J., Waterbury, J. B., Herdman, M., and Stanier, R. Y. (1979) Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Journal of General Microbiology 111, 1-16.
26. Rocap, G., Larimer, F. W., Lamerdin, J., Malfatti, S., Chain, P., Ahlgren, N. A., Arellano, A., Coleman, M., Hauser, L., Hess, W. R., Johnson, Z. I., Land, M., Lindell, D., Post, A. F., Regala, W., Shah, M., Shaw, S. L., Steglich, C., Sullivan, M. B., Ting, C. S., Tolonen, A., Webb, E. A., Ziser, E. R., and Chisholm, S. W. (2003) Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature 424, 1042-1047.
27. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning. Cold Spring Harbor, NY: Cold Spring Harbour Press.
28. Sasaki, T., Matsumoto, T., Yamamoto, K., Sakata, K., Baba, T., Katayose, Y., Wu, J., Niimura, Y., Cheng, Z., Nagamura, Y., Antonio, B. A., Kanamori, H., Hosokawa, S., Masukawa, M., Arikawa, K., Chiden, Y., Hayashi, M., Okamoto, M., Ando, T., Aoki, H., Arita, K., Hamada, M., Harada, C., Hijishita, S., Honda, M., Ichikawa, Y., Idonuma, A., Iijima, M., Ikeda, M., Ikeno, M., Itoh, S., Itoh, T., Itoh, Y., Itoh, Y., Iwabuchi, A., Kamiya, K., Karasawa, W., Katagiri, S., Kikuta, A., Kobayashi, N., Kono, I., et al. (2002) The genome sequence and structure of rice chromosome 1. Nature 420, 312-316.
29. Stover, C. K., Pham, X.-Q. T., Erwin, A. L., Mizoguchi, S. D., Warrener, P., Hickey, M. J., Brinkman, F. S. L., Hufnagle, W. O., Kowalik, D. J., Lagrou, M., Garber, R. L., Goltry, L., Tolentino, E., Westbrook-Wadman, S., Yuan, Y., Brody, L. L., Coulter, S. N., Folger, K. R., Kas, A., Larbig, K., Lim, R. M., Smith, K. A., Spencer, D. H., Wong, G. K.-S., Wu, Z., Paulsen, I. T., Reizer, J., Saier, M. H., Hancock, R. E. W., Lory, S., and Olson, M. V. (2000) Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen. Nature 406, 959-964.
30. Takami, H., Nakasone, K., Takaki, Y., Maeno, G., Sasaki, Y., Masui, N., Fuji, F., Hirama, C., Nakamura, Y., Ogasawara, N., Kuhara, S., and Horikoshi, K. (2000) Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis. Nucleic Acids Research 28, 4317-4331.
31. Tolbert, N. E. (1983) The oxidative photosynthetic carbon cycle. In Current Topics in Plant Biochemistry, Vol. 1 (Randall, D. D., Blevis, D. G., and Larson, R., eds.), Columbia, MO: University Missouri, pp. 63-77.
32. Wang, H. L., Postier, B. L., and Burnap, R. L. (2004) Alterations in global patterns of gene expression in Synechocystis sp. PCC 6803 in response to inorganic carbon limitation and the inactivation of ndhR, a LysR family regulator. Journal of Biological Chemistry 279, 5739-5751.
33. Wilson, R. L., Stauffer, L. T., and Stauffer, G. V. (1993) Roles of the gcvA and purr proteins in negative regulation of the Escherichia coli glycine cleavage enzyme system. Journal of Bacteriology 175, 5129-5134.
34. Wingler, A., Lea, P. J., and Leegood, R. C. (1997) Control of photosynthesis in barley plants with reduced activities of glycine decarboxylase. Planta 202, 171-178.