메뉴 건너뛰기




Volumn 5, Issue 10, 2003, Pages 1009-1015

Effect of N-fertilization, plant genotype and environmental conditions on nifH gene pools in roots of rice

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BACTERIAL PROTEINS; ENVIRONMENT; FERTILIZATION; GENETICS, POPULATION; GENOTYPE; NITROGEN; ORYZA SATIVA; OXIDOREDUCTASES; PLANT ROOTS; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; SOIL MICROBIOLOGY;

EID: 0141788244     PISSN: 14622912     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1462-2920.2003.00491.x     Document Type: Article
Times cited : (157)

References (32)
  • 1
    • 0036276617 scopus 로고    scopus 로고
    • Influence of different cultivars on populations of ammonia-oxidizing bacteria in the root environment of rice
    • Briones, A.M., Okabe, S., Umemiya, Y., Ramsing, N.B., Reichardt, W., and Okuyama, H. (2002) Influence of different cultivars on populations of ammonia-oxidizing bacteria in the root environment of rice. Appl Environ Micorbiol 66: 3067-3075.
    • (2002) Appl Environ Micorbiol , vol.66 , pp. 3067-3075
    • Briones, A.M.1    Okabe, S.2    Umemiya, Y.3    Ramsing, N.B.4    Reichardt, W.5    Okuyama, H.6
  • 2
    • 0027988426 scopus 로고
    • Cloning, DNA sequencing, and characterization of a nifD-homologous gene from the archaeon Methanosarcina barkeri 227 which resembles nifD1 from the eubacterium Clostridium pasteurianum
    • Chien, Y.T., and Zinder, S.H. (1994) Cloning, DNA sequencing, and characterization of a nifD-homologous gene from the archaeon Methanosarcina barkeri 227 which resembles nifD1 from the eubacterium Clostridium pasteurianum. J Bacteriol 176: 6590-6598.
    • (1994) J Bacteriol , vol.176 , pp. 6590-6598
    • Chien, Y.T.1    Zinder, S.H.2
  • 3
    • 0032798572 scopus 로고    scopus 로고
    • Endophytic expression of nif genes of Azoarcus sp. strain BH72 in rice roots
    • Egener, T., Hurek, T., and Reinhold-Hurek, B. (1999) Endophytic expression of nif genes of Azoarcus sp. strain BH72 in rice roots. Mol Plant-Microb Interact 12: 813-819.
    • (1999) Mol Plant-Microb Interact , vol.12 , pp. 813-819
    • Egener, T.1    Hurek, T.2    Reinhold-Hurek, B.3
  • 4
    • 0034548840 scopus 로고    scopus 로고
    • Preferential occurrence of diazotrophic endophytes, Azoarcus spp., in wild rice species and land races of Oryza sativa comparison with modern races
    • Engelhard, M., Hurek, T., and Reinhold-Hurek, B. (2000) Preferential occurrence of diazotrophic endophytes, Azoarcus spp., in wild rice species and land races of Oryza sativa comparison with modern races. Environ Microbiol 2: 131-141.
    • (2000) Environ Microbiol , vol.2 , pp. 131-141
    • Engelhard, M.1    Hurek, T.2    Reinhold-Hurek, B.3
  • 5
    • 0033827361 scopus 로고    scopus 로고
    • Response of a soil bacterial community to grassland succession as monitored by 16S rRNA levels of the predominant ribotypes
    • Felske, A., Wolterink, A., Van Lis, R., De Vos, W.M., and Akkermans, A.D. (2000) Response of a soil bacterial community to grassland succession as monitored by 16S rRNA levels of the predominant ribotypes. Appl Environ Microbiol 66: 3998-4003.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3998-4003
    • Felske, A.1    Wolterink, A.2    Van Lis, R.3    De Vos, W.M.4    Akkermans, A.D.5
  • 7
    • 0028265651 scopus 로고
    • Root colonization and systemic spreading of Azoarcus sp. strain BH72 in grasses
    • Hurek, T., Reinhold-Hurek, B., Van Montagu, M., and Kellenberger, E. (1994) Root colonization and systemic spreading of Azoarcus sp. strain BH72 in grasses. J Bacteriol 176: 1913-1923.
    • (1994) J Bacteriol , vol.176 , pp. 1913-1923
    • Hurek, T.1    Reinhold-Hurek, B.2    Van Montagu, M.3    Kellenberger, E.4
  • 8
    • 0030814221 scopus 로고    scopus 로고
    • Divergence in nitrogenases of Azoarcus spp., Proteobacteria of the β-subclass
    • Hurek, T., Egener, T., and Reinhold-Hurek, B. (1997) Divergence in nitrogenases of Azoarcus spp., Proteobacteria of the β-subclass. J Bacteriol 179: 4172-4178.
    • (1997) J Bacteriol , vol.179 , pp. 4172-4178
    • Hurek, T.1    Egener, T.2    Reinhold-Hurek, B.3
  • 9
    • 0035987085 scopus 로고    scopus 로고
    • Azoarcus grass endophytes contribute fixed nitrogen to the plant in an unculturable state
    • Hurek, T., Handley, L., Reinhold-Hurek, B., and Piché, Y. (2002) Azoarcus grass endophytes contribute fixed nitrogen to the plant in an unculturable state. Mol Plant-Microb Interact 15: 233-242.
    • (2002) Mol Plant-Microb Interact , vol.15 , pp. 233-242
    • Hurek, T.1    Handley, L.2    Reinhold-Hurek, B.3    Piché, Y.4
  • 10
    • 0025769569 scopus 로고
    • The gene encoding dinitrogenase reductase 2 is required for expression of the second alternative nitrogenase from Azotobacter vinelandii
    • Joerger, R.D., Wolfinger, E.D., and Bishop, P.E. (1991) The gene encoding dinitrogenase reductase 2 is required for expression of the second alternative nitrogenase from Azotobacter vinelandii. J Bacteriol 173: 4440-4446.
    • (1991) J Bacteriol , vol.173 , pp. 4440-4446
    • Joerger, R.D.1    Wolfinger, E.D.2    Bishop, P.E.3
  • 12
    • 0033823656 scopus 로고    scopus 로고
    • Molecular analysis of diazotroph diversity in the rhizosphere of smooth cordgrass, Spartina alterniflora
    • Lovell, C.R., Piceno, Y.M., Quattro, J.M., and Bagwell, C.E. (2000) Molecular analysis of diazotroph diversity in the rhizosphere of smooth cordgrass, Spartina alterniflora. Appl Environ Microbiol 66:
    • (2000) Appl Environ Microbiol , vol.66
    • Lovell, C.R.1    Piceno, Y.M.2    Quattro, J.M.3    Bagwell, C.E.4
  • 13
    • 0036209809 scopus 로고    scopus 로고
    • II-like signal transmitter protein and amtB. regulation of nif gene expression, nitrogenase activity, and posttranstational modification of NifH in Azoarcus sp. strain BH72
    • II-like signal transmitter protein and amtB. regulation of nif gene expression, nitrogenase activity, and posttranstational modification of NifH in Azoarcus sp. strain BH72. J Bacteriol 184: 2251-2259.
    • (2002) J Bacteriol , vol.184 , pp. 2251-2259
    • Martin, D.E.1    Reinhold-Hurek, B.2
  • 14
    • 0002807959 scopus 로고
    • Regulation of nitrogen fixation genes in free-living and symbiotic bacteria
    • Stacey, G., Burris, R., and Evans, H. (eds). New York: Chapman & Hall
    • Merrick, M. (1992) Regulation of nitrogen fixation genes in free-living and symbiotic bacteria. In Biological Nitrogen Fixation. Stacey, G., Burris, R., and Evans, H. (eds). New York: Chapman & Hall, pp. 835-876.
    • (1992) Biological Nitrogen Fixation , pp. 835-876
    • Merrick, M.1
  • 15
    • 0033818198 scopus 로고    scopus 로고
    • Variation of microbial rhizosphere communities in response to crop species, soil origin, and inoculation with Sinorhizobium meliloti L33
    • Miethling, R., Wieland, G., Backhaus, H., and Tebbe, C.C. (2000) Variation of microbial rhizosphere communities in response to crop species, soil origin, and inoculation with Sinorhizobium meliloti L33. Microb Ecol 40: 43-56.
    • (2000) Microb Ecol , vol.40 , pp. 43-56
    • Miethling, R.1    Wieland, G.2    Backhaus, H.3    Tebbe, C.C.4
  • 16
    • 0001933852 scopus 로고    scopus 로고
    • Regulation of nitrogenase activity in phototrophic bacteria by reversible covalent modification
    • Triplett, E.W. (ed.). Norfolk: Horizon Scientific Press
    • Nordlund, S. (2000) Regulation of nitrogenase activity in phototrophic bacteria by reversible covalent modification. In Prokaryotic Nitrogen Fixation. Triplett, E.W. (ed.). Norfolk: Horizon Scientific Press, pp. 149-164.
    • (2000) Prokaryotic Nitrogen Fixation , pp. 149-164
    • Nordlund, S.1
  • 17
    • 0032748070 scopus 로고    scopus 로고
    • Phylogenetic diversity of nitrogen fixation genes in the symbiotic microbial community in the gut of diverse termites
    • Ohkuma, M., Noda, S., and Kudo, T. (1999) Phylogenetic diversity of nitrogen fixation genes in the symbiotic microbial community in the gut of diverse termites. Appl Environ Microbiol 65: 4926-4934.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 4926-4934
    • Ohkuma, M.1    Noda, S.2    Kudo, T.3
  • 19
    • 0034054798 scopus 로고    scopus 로고
    • Stability in natural bacterial communities. I. Nutrient addition effects on rhizosphere diazotroph assemblage composition
    • Piceno, Y.M., and Lovell, C.R. (2000) Stability in natural bacterial communities. I. Nutrient addition effects on rhizosphere diazotroph assemblage composition. Microb Ecol 39: 32-40.
    • (2000) Microb Ecol , vol.39 , pp. 32-40
    • Piceno, Y.M.1    Lovell, C.R.2
  • 20
    • 0141484127 scopus 로고
    • A comparison of the three dinitrogenase reductases expressed by Azotobacter vinelandii
    • Premakumar, R., Chisnell, J.R., and Bishop, P.E. (1989) A comparison of the three dinitrogenase reductases expressed by Azotobacter vinelandii. Can J Microbiol 35: 344-348.
    • (1989) Can J Microbiol , vol.35 , pp. 344-348
    • Premakumar, R.1    Chisnell, J.R.2    Bishop, P.E.3
  • 21
    • 0031966083 scopus 로고    scopus 로고
    • Life in grasses: Diazotrophic endophytes
    • Reinhold-Hurek, B., and Hurek, T. (1998) Life in grasses: diazotrophic endophytes. Trends Microbiol 6: 139-144.
    • (1998) Trends Microbiol , vol.6 , pp. 139-144
    • Reinhold-Hurek, B.1    Hurek, T.2
  • 22
    • 0035119414 scopus 로고    scopus 로고
    • 2 incorporation following inoculation of sterile plants with Acetobacter diazotrophicus wild-type and nif mutant strains
    • 2 incorporation following inoculation of sterile plants with Acetobacter diazotrophicus wild-type and nif mutant strains. Mol Plant-Microb Interact 14: 358-366.
    • (2001) Mol Plant-Microb Interact , vol.14 , pp. 358-366
    • Sevilla, M.1    Burris, R.H.2    Gunapala, N.3    Kennedy, C.4
  • 23
    • 0030665873 scopus 로고    scopus 로고
    • Isolation of endophytic bacteria from rice and assessment of their potential for supplying rice with biologically fixed nitrogen
    • Stoltzfus, J.R., So, R., Malarvithi, P.P., Ladha, J.K., and De Bruijn, F.J. (1997) Isolation of endophytic bacteria from rice and assessment of their potential for supplying rice with biologically fixed nitrogen. Plant Soil 194: 25-36.
    • (1997) Plant Soil , vol.194 , pp. 25-36
    • Stoltzfus, J.R.1    So, R.2    Malarvithi, P.P.3    Ladha, J.K.4    De Bruijn, F.J.5
  • 24
    • 0028987145 scopus 로고
    • 2-fixing bacterial diversity detected in rice roots by molecular evolutionary analysis of nifH gene sequences
    • 2-fixing bacterial diversity detected in rice roots by molecular evolutionary analysis of nifH gene sequences. J Bacteriol 177: 1414-1417.
    • (1995) J Bacteriol , vol.177 , pp. 1414-1417
    • Ueda, T.1    Suga, Y.2    Yahiro, N.3    Matsuguchi, T.4
  • 25
    • 0036276617 scopus 로고    scopus 로고
    • Influence of different cultivars on populations of ammonia-oxidizing bacteria in the root environment of rice
    • Umemiya, Y., Ramsing, N.B., Reichardt, W., and Okuyama, H. (2002) Influence of different cultivars on populations of ammonia-oxidizing bacteria in the root environment of rice. Appl Environ Microbiol 68: 3067-3075.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3067-3075
    • Umemiya, Y.1    Ramsing, N.B.2    Reichardt, W.3    Okuyama, H.4
  • 26
    • 0028509254 scopus 로고
    • TREECON for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
    • Van de Peer, Y., and de Wachter, R. (1994) TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Appl Biosci 10: 569-570.
    • (1994) Comput Appl Biosci , vol.10 , pp. 569-570
    • Van De Peer, Y.1    De Wachter, R.2
  • 27
    • 8544261161 scopus 로고    scopus 로고
    • Isolation of Azospirillum lipoferum from the rhizosphere of rice by a new, simple method
    • Van Trân, V., Ngôkê, S., Berge, O., Faure, D., Bally, R., Hebbar, P., and Heulin, T. (1997) Isolation of Azospirillum lipoferum from the rhizosphere of rice by a new, simple method. Can J Microbiol 43: 486-490.
    • (1997) Can J Microbiol , vol.43 , pp. 486-490
    • Van Trân, V.1    Ngôkê, S.2    Berge, O.3    Faure, D.4    Bally, R.5    Hebbar, P.6    Heulin, T.7
  • 28
    • 0035654216 scopus 로고    scopus 로고
    • Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development
    • Wieland, G., Neumann, R., and Backhaus, H. (2001) Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development. Appl Environ Microbiol 67: 5849-5854.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 5849-5854
    • Wieland, G.1    Neumann, R.2    Backhaus, H.3
  • 29
    • 0001975986 scopus 로고
    • Phylogenetic classification of nitrogen-fixing organisms
    • Stacey, G., Burris, R.H., and Evans, H.J. (eds). New York: Chapman & Hall
    • Young, J.P.W. (1992) Phylogenetic classification of nitrogen-fixing organisms. In Biological Nitrogen Fixation. Stacey, G., Burris, R.H., and Evans, H.J. (eds). New York: Chapman & Hall, pp. 43-86.
    • (1992) Biological Nitrogen Fixation , pp. 43-86
    • Young, J.P.W.1
  • 30
    • 0030303003 scopus 로고    scopus 로고
    • Problems and promises of assaying the genetic potential for nitrogen fixation in the marine
    • Zehr, J.P., and Capone, D.G. (1996) Problems and promises of assaying the genetic potential for nitrogen fixation in the marine. Environ Microb Ecol 32: 263-281.
    • (1996) Environ Microb Ecol , vol.32 , pp. 263-281
    • Zehr, J.P.1    Capone, D.G.2
  • 31
    • 0031664504 scopus 로고    scopus 로고
    • New nitrogen-fixing microorganisms detected in oligotrophic oceans by amplification of nitrogenase (nifH) genes
    • Zehr, J.P., Mellon, M.T., and Zani, S. (1998) New nitrogen-fixing microorganisms detected in oligotrophic oceans by amplification of nitrogenase (nifH) genes. Appl Environ Microbiol 64: 3444-3450.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 3444-3450
    • Zehr, J.P.1    Mellon, M.T.2    Zani, S.3
  • 32
    • 0024746373 scopus 로고
    • Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium thiebautii
    • Zehr, J.P., and McReynolds, L.A. (1989) Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium thiebautii. Appl Environ Microbiol 55: 2522-2526.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 2522-2526
    • Zehr, J.P.1    McReynolds, L.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.