Conservation of the 2,4-diacetylphloroglucinol biosynthesis locus among fluorescent Pseudomonas strains from diverse geographic locations

Applied and Environmental Microbiology

Volumn 62, Issue 2, 1996, Pages 552-563

  Keel, C ^a,c   Weller, D M ^b   Natsch, A ^a   Defago G ^a   Cook, R J ^b   Thomashow, L S ^b  

^a ETH ZURICH   (Switzerland)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c UNIVERSITY OF LAUSANNE   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

2,4 DIACETYLCHLOROGLUCINOL; ANTIBIOTIC AGENT; BACTERIAL DNA; UNCLASSIFIED DRUG;

ANTIBIOTIC BIOSYNTHESIS; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIUM ISOLATION; DNA HYBRIDIZATION; GEOGRAPHIC DISTRIBUTION; PHENOTYPE; PLANT; PSEUDOMONAS FLUORESCENS; STRAIN DIFFERENCE;

EID: 0030070616     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.62.2.552-563.1996     Document Type: Article

References (60)

1. Baker, K. F., and R. J. Cook. 1974. Biological control of plant pathogens W. H. Freeman & Co., San Francisco.
2. Bangera, M. G., and L. S. Thomashow. Characterization of a genomic locus required for synthesis of the antibiotic 2,4-diacetylphloroglucinol by the biological control agent Pseudomonas fluorescens Q2-87. Mol Plant-Microbe Interact., in press.
3. Bangera, M. G., D. M. Weller, and L. S. Thomashow. 1994. Genetic analysis of the 2,4-diacetylphloroglucinol biosynthetic locus from Pseudomonas fluorescens, Q2-87, p. 383-386. in M. J. Daniels, J. A. Downie, and A. E. Osbourn (ed.), Advances in molecular genetics of plant-microbe interactions, vol. 3 Kluwer Academic Publishers, Dordrecht, The Netherlands.
4. Bolivar, F., and K. Backman, 1979. Plasmids of Escherichia coli as cloning vectors. Methods Enzymol. 68:245-267.
5. Bowden, K., J. L. Broadbent, and W. J. Ross. 1965. Some simple anthelmintics. Br. J. Pharmacol. 24:714-724.
6. Broadbent, D., R. P. Mabelis, and H. Spencer. 1976. C-Acetylphloroglucinols from Pseudomonas fluorescens. Phytochemistry 15:1785.
7. Défago, G. 1993. 2,4-Diacetylphloroglucinol. a promising compound in biocontrol. Plant Pathol. 42:311-312.
8. Défago, G., C.-H. Berling, U. Burger, D. Haas, G. Kahr, C. Keel, C. Voisard, P. Wirthner, and B. Wüthrich. 1990. Suppression of black root rot of tobacco and other root diseases by strains of Pseudomonas fluorescens: potential applications and mechanisms, p. 93-108. In D. Hornby (ed), Biological control of soil-borne plant pathogens. CAB International, Oxford.
9. Défago, G., and D. Haas. 1990. Pseudomonads as antagonists of soilborne plant pathogens: modes of action and genetic analysis. Soil Biochem. 6:249-291.
10. Dutrecq, A., P. Debras, J. Stevaux, and M. Marlier. 1991 Activity of 2,4-diacetylphloroglucinol isolated from a strain of Pseudomonas fluorescens to Gaeumannomyces graminis var. tritici. p. 252-257 In A. B. R Beemster, G. J Bollen M. Gerlagh, M A Ruissen, B. Schippers, and A. Tempel (ed.), Biotic interactions and soil-borne diseases. Elsevier Biomedical Press Amsterdam.
11. Fenton, A. M., P. M. Stephens, J. Crowley, M. O'Callaghan, and F. O'Gara. 1992 Exploitation of gene(s) involved in 2,4-diacetylphloroglucinol biosynthesis to confer a new biocontrol capability to a Pseudomonas strain Appl Environ. Microbiol 58:3873-3878.
12. Fuchs, J., and G. Défago. 1991. Protection of cucumber plants against black root rot caused by Phomopsis sclerotioides with rhizobacteria. p. 57-62 In C. Keel, B. Koller, and G. Défago (ed.), Plant growth-promoting rhizobacteria - progress and prospects. IOBC/WPRS Bulletin XIV/8. Interlaken. Switzerland.
13. Gainper, M., B. Ganter, M. R. Polito, and D. Haas. 1992. RNA processing modulates the expression of the arcDABC operon in Pseudomonas aeruginosa. J Mol. Biol. 226:943-957.
14. Garagulya, A. D., E. A. Kiprianova, and O. I. Boiko. 1974. Antibiotic effect of bacteria from the genus Pseudomonas on phytopathogenic fungi Mikrobiol. Zh. (Kiev) 36:197-202.
15. Gould, W. D., C. Hagedorn, T. R. Bardinelli, and R. M. Zablotowicz. 1985. New selective media for enumeration and recovery of fluorescent pseudomonads from various habitats. Appl. Environ. Microbiol. 49:28-32.
16. Hara, H., M. Bangera, D.-S. Kim, D. M. Weller, and L. S. Thomashow. 1994 Effect of transfer and expression of antibiotic biosynthesis genes on biological control activity of fluorescent pseudomonads, p. 247-249. In M. H Ryder, P. M. Stephens, and G D. Bowen (ed), Improving plant productivity with rhizosphere bacteria. CSIRO, Adelaide, Australia.
17. Harrison, L. A., L. Letendre, P. Kovacevich, E. Pierson, and D. M. Weller. 1993 Purification of an antibiotic effective against Gaeumannomyces graminis var. tritici produced by a biocontrol agent, Pseudomonas aureofaciens Soil Biol. Biochem. 25:215-221.
18. Holloway, B. W. 1969. Genetics of Pseudomonas. Bacteriol. Rev. 33:419-443.
19. Howell, C. R., and R. D. Stipanovic. 1979. Control of Rhizoctonia solani on cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium. Phytopathology 69:480-482.
20. Howell, C. R., and R. D. Stipanovic. 1980. Suppression of Pythium ultimum-induced damping-off of cotton seedlings by Pseudomonas fluorescens and its antibiotic, pyoluteorin. Phytopathology 70:712-715.
21. Jaccard, P. 1908. Nouvelles recherches sur la distribution florale. Bull. Soc. Vaudoise Sci. Nat. 44:223-270
22. Kataryan, B. T., and G. G. Torgashova. 1976. Spectrum of herbicidal activity of 2,4-diacetylphloroglucinol. Dokl. Akad. Nauk. Arm. SSR 63:109-112
23. Keel, C., U. Schnider, M. Maurhofer, C. Voisard, J. Laville, U. Burger, P. Wirthner, D. Haas, and G. Défago. 1992. Suppression of root diseases by Pseudomonas fluorescent CHA0: importance of the bacterial secondary metabolite 2,4-diacetylphloroglucinol. Mol. Plant-Microbe Interact. 5:4-13
24. Keel, C., C. Voisard, C.-H. Berling, G. Kahr, and G. Défago. 1989. Iron sufficiency, a prerequisite for suppression of tobacco black root rot by Pseudomonas fluorescens strain CHA0 under gnotobiotic conditions. Phytopathology 79:584-589.
25. Keel, C., P. Wirthner, T. Oberhänsli, C. Voisard, U. Burger, D. Haas, and G. Défago. 1990. Pseudomonads as antagonists of plant pathogens in the rhizosphere. role of the antibiotic 2,4-diacetylphloroglucinol in the suppression of black root rot of tobacco. Symbiosis 9:327-341.
26. Keel, C., M. Zala, and A. Natsch. Unpublished data.
27. King, E. O., M. K. Ward, and D. E. Raney. 1954. Two simple media for the demonstration of pyocyanin and fluorescein. J. Lab Clin. Med. 44:301-307.
28. Koller, B., L. Gianfranceschi, N. Seglias, J. McDermott, and C. Gessler. 1994. DNA markers linked to Malus floriburula 821 scab resistance. Plant Mol. Biol. 26:597-602.
29. Kraus, J., and J. E. Loper. 1992. Lack of evidence for a role of antifungal metabolite production by Pseudomonas fluorescens Pf-5 in biological control of Pythium damping-off of cucumber. Phytopathology 82:264-271
30. Lemanceau, P., and C. Alabouvette. 1991. Biological control of Fusarium diseases by the association of fluorescent Pseudomonas and non-pathogenic Fusarium, p. 45-50. In C Keel, B. Koller, and G. Défago (ed.), Plant growth-promoting rhizobacteria - progress and prospects. IOBC/WPRS Bulletin XIV/8, Interlaken, Switzerland.
31. Levy, E., F. J. Gough, K. D. Berlin, P. W. Guiana, and J. T. Smith. 1992. Inhibition of Septoria tritici and other phytopathogenic fungi and bacteria by Pseudomonas fluorescens and its antibiotics. Plant Pathol. 41:335-341
32. Maurhofer, M., C. Keel, D. Haas, and G. Défago. 1995. Influence of plant species on disease suppression by Pseudomonas fluorescens strain CHA0 with enhanced antibiotic production. Plant Pathol. 44:40-50.
33. Maurhofer, M., C. Keel, U. Schnider, C. Voisard, D. Haas, and G. Défago. 1992. Influence of enhanced antibiotic production in Pseudomonas fluorescens strain CHA0 on its disease suppressive capacity. Phytopathology 82: 190-195.
34. Meyer, J. M., and M. A. Abdallah. 1978. The fluorescent pigment of Pseudomonas fluorescens: biosynthesis, purification and physicochemical properties. J. Gen. Microbiol. 107:319-328.
35. Nowak-Thompson, B., S. J. Gould, J. Kraus, and J. E. Loper. 1994. Production of 2,4-diacetylphloroglucinol by the biocontrol agent Pseudomonas fluorescens Pf-5. Can. J. Microbiol 40:1064-1066.
36. Pidoplichko, V. N., and A. D. Garagulya. 1974. Effect of antagonistic bacteria on development of wheat root rot. Mikrobiol Zh. (Kiev) 36:599-602.
37. Pidoplichko, V. N., and A. D. Garagulya. 1979 Antagonistic activity of bacterial genera Pseudomonas and Bacillus against root rot causal agents in winter wheat. Mikol. Fitopatol. 13:53-57.
38. Pierson, E. A., and D. M. Weller. 1994. Use of mixtures of fluorescent pseudomonads to suppress take-all and improve the growth of wheat. Phytopathology 84:940-947
39. Reddy, T. K. K., and A. V. Borovkov. 1970. Antibiotic properties of 2,4-diacetylphloroglucinol (2,4-diacetyl-1,3,5-trihydroxybenzene) produced by Pseudomonas fluorescens strain 26-o. Antibiotiki (Moscow) 15:19-21
40. Reddy, T. K. K., Y. P. Khudiakov, and A. V. Borovkov. 1969. Pseudomonas fluorescens strain 26-o, producing phytotoxic substances Mikrobiologiya 38: 909-913
41. Rohlf, F. J. 1987. NTSYS-pc Numerical taxonomy and multivariate analysis system for the IBM PC microcomputer, version 1 3 Applied Biostatistics Inc., Setauket, N Y.
42. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
43. Schnider, U., C. Keel, C. Blumer, J. Troxler, G. Défago, and D. Haas. 1995. Amplification of the housekeeping sigma factor in Pseudomonas fluorescens CHA0 enhances antibiotic production and improves biocontrol abilities. J. Bacteriol. 177:5387-5392.
44. Shanahan, P., J. D. Glennon, J. J. Crowley, D. F. Donnelly, and F. O'Gara. 1993. HPLC assay of microbially derived phloroglucinol antibiotics in establishing the biosynthetic route to production, and the factors affecting their regulation. Anal. Chim. Acta 272:271-277.
45. Shanahan, P., D. J. O'Sullivan, P. Simpson, J. D. Glennon, and F. O'Gara. 1992. Isolation of 2,4-diacetylphloroglucinol from a fluorescent pseudomonad and investigation of physiological parameters influencing its production. Appl. Environ. Microbiol. 58:353-358.
46. Stabb, E. V., L. M. Jacobson, and J. Handelsman. 1994. Zwittermicin A-producing strains of Bacillus cereus from diverse soils. Appl. Environ. Microbiol. 60:4404-4412.
47. Stanisich, V. A., and B. W. Holloway. 1972. A mutant sex factor of Pseudomonas aeruginosa. Genet. Res. 19:91-108.
48. Stutz, E., G. Défago, and H. Kern. 1986. Naturally occurring fluorescent pseudomonads involved in suppression of black root rot of tobacco. Phytopathology 76:181-185.
49. Stutz, E., G. Kahr, and G. Défago. 1989 Clays involved in suppression of tobacco black root rot by A strain of Pseudomonas fluorescens Soil Biol. Biochem. 21:361-366.
50. Stutz, E. W., G. Défago, R. Hantke, and H. Kern. 1985 Effect of parent materials derived from different geological strata on suppressiveness of soils to black root rot of tobacco, p. 215-217. In C. A. Parker, A. D Rovira, K. J Moore, P T. W. Wong, and J. F. Kollmorgen (ed). Ecology and management of soil-borne plant pathogens. Academic Press, Inc., New York.
51. Tada, M., T. Takakuwa, M. Nagai, and T. Yoshii. 1990. Antiviral and antimicrobial activity of 2,4-diacylphloroglucinols, 2-acylcyclohexane-1,3-diones and 2-carboxamidedocyclohexane-1,3-diones Agric. Biol. Chem. 54:3061-3063.
52. Tamietti, G., L. Ferraris, A. Matta, and I. Abbattista Gentile. 1993. Physiological responses of tomato plants grown in Fusarium suppressive soil. J. Phytopathol. 138:66-76.
53. Thomashow, L. S., and D. M. Weller. 1988 Role of a phenazine antibiotic from Pseudomonas fluorescent in biological control of Gaeumannomyces graminis var. tritici. J. Bacteriol. 170:3499-3508
54. Tomás-Lorente, F., E. Iniesta-Sanmartín, F. A. Tomás-Barberán, W. Trowitzsch-Kienast, and V. Wray. 1989. Antifungal phloroglucinol derivatives and lipophilic flavonoids from Helichrysum decumbent. Phytochemistry 28:1613-1615.
55. Vincent, M. N., L. A. Harrison, J. M. Brackin, P. A. Kovacevich, P. Mukerji, D. M. Weller, and E. A. Pierson. 1991. Genetic analysis of the antifungal activity of a soilborne Pseudomonas aureofaciens strain. Appl. Environ. Microbiol. 57:2928-2934.
56. Voisard, C., C. Bull, C. Keel, J. Laville, M. Maurhofer, U. Schnider, G. Défago, and D. Haas. 1994. Biocontrol of root diseases by Pseudomonas fluorescens CHA0: current concepts and experimental approaches, p. 67-89. In F. O'Gara, D. Dowling, and B. Boesten (ed), Molecular ecology of rhizosphere microorganisms. VCH Publishers. Weinheim, Germany.
57. Voisard, C., C. Keel, D. Haas, and G. Défago. 1989. Cyanide production by Pseudomonas fluoiescens helps suppress black root rot of tobacco under gnotobiotic conditions. EMBO J. 8:351-358.
58. Weller, D. M., and R. J. Cook. 1983. Suppression of take-all of wheat by seed treatment with fluorescent pseudomonads. Phytopathology 73:463-469.
59. Weller, D. M., and L. S. Thomashow. 1993. Use of rhizobacteria for biocontrol. Curr. Opin Biotechnol. 4:306-311.
60. Williams, J. G. K., A. R. Kubelik, K. J. Livak, J. A Rafalski, and S. V. Tingey. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531-6535.