-
1
-
-
0030585061
-
The structure of elongation factor G in complex with GDP: Conformational flexibility and nucleotide exchange
-
Al-Karadaghi, S., Avarsson, A., Garber, M., Zheltonosova, J., and Liljas, A. 1996. The structure of elongation factor G in complex with GDP: Conformational flexibility and nucleotide exchange. Structure 4: 555-565.
-
(1996)
Structure
, vol.4
, pp. 555-565
-
-
Al-Karadaghi, S.1
Avarsson, A.2
Garber, M.3
Zheltonosova, J.4
Liljas, A.5
-
2
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brünger, A.T., Adams, P.D., Clore, G.M., DeLano, W.L., Gros, P., Grosse-Kunstleve, R.W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N.S., et al. 1998. Crystallography and NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr. D 54: 905-921.
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.-S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
3
-
-
0028129989
-
Conserved structures and diversity of functions of RNA-binding proteins
-
Burd, C.G. and Dreyfuss, G. 1994. Conserved structures and diversity of functions of RNA-binding proteins. Science 265: 615-621.
-
(1994)
Science
, vol.265
, pp. 615-621
-
-
Burd, C.G.1
Dreyfuss, G.2
-
4
-
-
0031471204
-
The solution structure of the S1 RNA binding domain: A member of an ancient nucleic acid-binding fold
-
Bycroft, M., Hubbard, T.J.P., Proctor, M., Freund, S.M.V., and Murzin, A.G. 1997. The solution structure of the S1 RNA binding domain: A member of an ancient nucleic acid-binding fold. Cell 88: 235-242.
-
(1997)
Cell
, vol.88
, pp. 235-242
-
-
Bycroft, M.1
Hubbard, T.J.P.2
Proctor, M.3
Freund, S.M.V.4
Murzin, A.G.5
-
5
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project, Number 4. 1994. The CCP4 suite: Programs for protein crystallography. Acta Crystallogr. D 50: 760-763.
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 760-763
-
-
-
6
-
-
0026695513
-
Identification of the rph RNase PH. gene of Bacillus subtilis: Evidence for suppression of cold-sensitive mutations in Escherichia coli
-
Craven, M.G., Henner, D.J., Alessi, D., Schauer, A.T., Ost, K.A., Deutscher, M.P., and Friedman, D.I. 1992. Identification of the rph RNase PH. gene of Bacillus subtilis: Evidence for suppression of cold-sensitive mutations in Escherichia coli. J. Bacteriol. 174: 4727-4735.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 4727-4735
-
-
Craven, M.G.1
Henner, D.J.2
Alessi, D.3
Schauer, A.T.4
Ost, K.A.5
Deutscher, M.P.6
Friedman, D.I.7
-
7
-
-
0002807705
-
tRNA processing nucleases
-
(eds. D. Söll, and U.L. RajBhandary). American Society of Microbiol. Press, Washington, DC
-
Deutscher, M.P. 1995. tRNA processing nucleases. In tRNA: Structure, biosynthesis, and function (eds. D. Söll, and U.L. RajBhandary), pp. 51-65. American Society of Microbiol. Press, Washington, DC.
-
(1995)
tRNA: Structure, Biosynthesis, and Function
, pp. 51-65
-
-
Deutscher, M.P.1
-
8
-
-
0033119938
-
Further additions to Molscript version 1.4, including reading and contouring of electrondensity maps
-
Esnouf, R.M. 1999. Further additions to Molscript version 1.4, including reading and contouring of electrondensity maps. Acta Crystallogr. D 55: 938-940.
-
(1999)
Acta Crystallogr. D
, vol.55
, pp. 938-940
-
-
Esnouf, R.M.1
-
9
-
-
0014806605
-
Kinetics of polymerization and phosphorolysis reactions of Escherichia coli polynucleotide phosphorylase. Evidence for multiple binding of polynucleotide in phosphorolysis
-
Godefroy, T. 1970. Kinetics of polymerization and phosphorolysis reactions of Escherichia coli polynucleotide phosphorylase. Evidence for multiple binding of polynucleotide in phosphorolysis. Eur. J. Biochem. 14: 222-231.
-
(1970)
Eur. J. Biochem.
, vol.14
, pp. 222-231
-
-
Godefroy, T.1
-
10
-
-
0024520745
-
Site-directed mutagenesis by overlap extension using the polymerase chain reaction
-
Ho, S.N., Hunt, H.D., Horton, R.M., Pullen, J.K., and Pease, L.R. 1989. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77: 51-59.
-
(1989)
Gene
, vol.77
, pp. 51-59
-
-
Ho, S.N.1
Hunt, H.D.2
Horton, R.M.3
Pullen, J.K.4
Pease, L.R.5
-
11
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm, L. and Sander, C. 1993. Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233: 123-138.
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
12
-
-
0042858117
-
Crystal structure of the tRNA processing enzyme RNase PH from Aquifex aeolicus
-
Ishii, R., Nureki, O., and Yokoyama, S. 2003. Crystal structure of the tRNA processing enzyme RNase PH from Aquifex aeolicus. J. Biol. Chem. 278: 32397-32404.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 32397-32404
-
-
Ishii, R.1
Nureki, O.2
Yokoyama, S.3
-
13
-
-
0026794042
-
Overexpression and rapid purification of the orfF/rph gene product, RNase PH of Escherichia coli
-
Jensen, K.F., Andersen, J.T., and Poulsen, P. 1992. Overexpression and rapid purification of the orfF/rph gene product, RNase PH of Escherichia coli. J. Biol. Chem. 267: 17147-17152.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 17147-17152
-
-
Jensen, K.F.1
Andersen, J.T.2
Poulsen, P.3
-
14
-
-
0026666335
-
The presence of only one of five exoribonucleases is sufficient to support the growth of Escherichia coli
-
Kelly, K.O. and Deutscher, M.P., 1992a. The presence of only one of five exoribonucleases is sufficient to support the growth of Escherichia coli. J. Bacteriol. 174: 6682-6684.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 6682-6684
-
-
Kelly, K.O.1
Deutscher, M.P.2
-
15
-
-
0026806544
-
Characterization of Escherichia coli RNase PH
-
-. 1992b. Characterization of Escherichia coli RNase PH. J. Biol. Chem. 267: 17153-17158.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 17153-17158
-
-
-
16
-
-
0026658531
-
RNase PH is essential for tRNA processing and viability in RNase-deficient Escherichia coli cells
-
Kelly, K.O., Reuven, N.B., Li, Z., and Deutscher, M.P. 1992. RNase PH is essential for tRNA processing and viability in RNase-deficient Escherichia coli cells. J. Biol. Chem. 267: 16015-16018.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 16015-16018
-
-
Kelly, K.O.1
Reuven, N.B.2
Li, Z.3
Deutscher, M.P.4
-
17
-
-
0031574325
-
Not your average density
-
Kleywegt, G.J. and Read, R.J. 1997. Not your average density. Structure 5: 1557-1569.
-
(1997)
Structure
, vol.5
, pp. 1557-1569
-
-
Kleywegt, G.J.1
Read, R.J.2
-
18
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis, P.J. 1991. MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures. J. Appl. Cryst. 24: 946-950.
-
(1991)
J. Appl. Cryst.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
19
-
-
0030576503
-
Maturation pathways for E. coli tRNA precursors: A random multienzyme process in vivo
-
Li, Z. and Deutscher, M.P. 1996. Maturation pathways for E. coli tRNA precursors: A random multienzyme process in vivo. Cell 86: 503-512.
-
(1996)
Cell
, vol.86
, pp. 503-512
-
-
Li, Z.1
Deutscher, M.P.2
-
20
-
-
0004574825
-
Polynucleotide phosphorylase
-
(ed. T.E. Creighton). John Wiley & Sons, Europe
-
Littauer, U.Z. and Grunberg-Manago, M. 1998. Polynucleotide phosphorylase. In Encyclopedia of molecular biology (ed. T.E. Creighton), pp. 1911-1918. John Wiley & Sons, Europe.
-
(1998)
Encyclopedia of Molecular Biology
, pp. 1911-1918
-
-
Littauer, U.Z.1
Grunberg-Manago, M.2
-
21
-
-
0030836805
-
Comparative sequence analysis of ribonucleases HII, III, II, PH and D
-
Mian, I.S. 1997. Comparative sequence analysis of ribonucleases HII, III, II, PH and D. Nucleic Acid Res. 25: 3187-3195.
-
(1997)
Nucleic Acid Res.
, vol.25
, pp. 3187-3195
-
-
Mian, I.S.1
-
22
-
-
0029182369
-
A ribosomal protein module in EF-G and DNA gyrase
-
Murzin, A.G. 1995. A ribosomal protein module in EF-G and DNA gyrase. Nat. Struct. Biol. 2: 25-26.
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 25-26
-
-
Murzin, A.G.1
-
23
-
-
84920325457
-
AMoRe: An automated package for molecular replacement
-
Navaza, J. 1994. AMoRe: An automated package for molecular replacement. Acta Crystallogr. A 50: 157-163.
-
(1994)
Acta Crystallogr. A
, vol.50
, pp. 157-163
-
-
Navaza, J.1
-
24
-
-
0032417685
-
Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA
-
Niranjanakumari, S., Stams, T., Crary, S.M., Christianson, D.W., and Fierke, C.A. 1998. Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA. Proc. Natl. Acad. Sci. 95: 15212-15217.
-
(1998)
Proc. Natl. Acad. Sci.
, vol.95
, pp. 15212-15217
-
-
Niranjanakumari, S.1
Stams, T.2
Crary, S.M.3
Christianson, D.W.4
Fierke, C.A.5
-
25
-
-
0033081413
-
Cys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA
-
Cys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA. Structure 7: 143-156.
-
(1999)
Structure
, vol.7
, pp. 143-156
-
-
Nissen, P.1
Thirup, S.2
Kjeldgaard, M.3
Nyborg, J.4
-
26
-
-
0026079791
-
Escherichia coli orFE upstream of pyrE encodes RNase PH
-
Ost, K.A. and Deutscher, M.P. 1991. Escherichia coli orFE upstream of pyrE encodes RNase PH. J. Bacteriol. 173: 5589-5591.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5589-5591
-
-
Ost, K.A.1
Deutscher, M.P.2
-
27
-
-
0021473098
-
Structure of the Escherichia coli pyrE operon and control of pyrE expression by a UTP modulated intercistronic attentuation
-
Poulsen, P., Bonekamp, F., and Jensen, K.F. 1984. Structure of the Escherichia coli pyrE operon and control of pyrE expression by a UTP modulated intercistronic attentuation. EMBO J. 3: 1783-1790.
-
(1984)
EMBO J.
, vol.3
, pp. 1783-1790
-
-
Poulsen, P.1
Bonekamp, F.2
Jensen, K.F.3
-
28
-
-
84944812409
-
Improved Fourier coefficients for maps using phases from a partial structure with errors
-
Read, R. 1986. Improved Fourier coefficients for maps using phases from a partial structure with errors. Acta Crystallogr. A 42: 140-149.
-
(1986)
Acta Crystallogr. A
, vol.42
, pp. 140-149
-
-
Read, R.1
-
30
-
-
0034614360
-
The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA
-
Spitzfaden, C., Nicholson, N., Jones, J.J., Guth, S., Lehr, R., Prescott, C.D., Hegg, L.A., and Eggleston, D.S. 2000. The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA. J. Mol. Biol. 295: 105-115.
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 105-115
-
-
Spitzfaden, C.1
Nicholson, N.2
Jones, J.J.3
Guth, S.4
Lehr, R.5
Prescott, C.D.6
Hegg, L.A.7
Eggleston, D.S.8
-
31
-
-
0032076249
-
Ribonuclease P protein structure: Evolutionary origins in the translational apparatus
-
Stams, T., Niranjanakumari, S., Fierke, C.A., and Christianson, D.W. 1998. Ribonuclease P protein structure: Evolutionary origins in the translational apparatus. Science 280: 752-755.
-
(1998)
Science
, vol.280
, pp. 752-755
-
-
Stams, T.1
Niranjanakumari, S.2
Fierke, C.A.3
Christianson, D.W.4
-
32
-
-
0024322474
-
Mechanism of polynucleotide phosphorylase
-
Sulewski, M., Marchese-Ragona, S.P., Johnson, K.A., and Benkovis, S.J. 1989. Mechanism of polynucleotide phosphorylase. Biochemistry 28: 5855-5864.
-
(1989)
Biochemistry
, vol.28
, pp. 5855-5864
-
-
Sulewski, M.1
Marchese-Ragona, S.P.2
Johnson, K.A.3
Benkovis, S.J.4
-
33
-
-
0034435974
-
A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation
-
Symmons, M.F., Jones, G.H., and Luisi, B.F. 2000. A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation. Structure 8: 1215-1226.
-
(2000)
Structure
, vol.8
, pp. 1215-1226
-
-
Symmons, M.F.1
Jones, G.H.2
Luisi, B.F.3
-
34
-
-
0036164937
-
Running rings around RNA: A superfamily of phosphate-dependent RNases
-
Symmons, M.F., Williams, M.G., Luisi, B.F., Jones, G.H., and Carpousis, A.J. 2002. Running rings around RNA: A superfamily of phosphate-dependent RNases. Trends Biochem. Sci. 27: 11-18.
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 11-18
-
-
Symmons, M.F.1
Williams, M.G.2
Luisi, B.F.3
Jones, G.H.4
Carpousis, A.J.5
-
35
-
-
0030860690
-
An essential function for the phosphate-dependent exoribonucleases RNase PH and polynucleotide phosphorylase
-
Zhou, Z. and Deutscher, M.P. 1997. An essential function for the phosphate-dependent exoribonucleases RNase PH and polynucleotide phosphorylase. J. Bacteriol. 179: 4391-4395.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4391-4395
-
-
Zhou, Z.1
Deutscher, M.P.2
-
36
-
-
0035283033
-
Exoribonuclease superfamilies: Structural analysis and phylogenetic distribution
-
Zuo, Y. and Deutscher, M.P. 2001. Exoribonuclease superfamilies: Structural analysis and phylogenetic distribution. Nucleic Acid Res. 29: 1017-1026.
-
(2001)
Nucleic Acid Res.
, vol.29
, pp. 1017-1026
-
-
Zuo, Y.1
Deutscher, M.P.2
|