-
2
-
-
0031038377
-
Local interactions in protein folding: Lessons from the α-helix
-
Aurora, R., Creamer, T.P., Srinivasan, R., and Rose, G.D. 1997. Local interactions in protein folding: Lessons from the α-helix. J. Biol. Chem. 272: 1413-1416.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 1413-1416
-
-
Aurora, R.1
Creamer, T.P.2
Srinivasan, R.3
Rose, G.D.4
-
3
-
-
0037610743
-
Role of backbone solvation and electrostatics in generating preferred peptide backbone conformations: Distributions of φ
-
Avbelj, F. and Baldwin, R.L. 2003. Role of backbone solvation and electrostatics in generating preferred peptide backbone conformations: Distributions of φ. Proc. Natl. Acad. Sci. 100: 5742-5747.
-
(2003)
Proc. Natl. Acad. Sci.
, vol.100
, pp. 5742-5747
-
-
Avbelj, F.1
Baldwin, R.L.2
-
4
-
-
0033954256
-
The Protein Data Bank
-
Berman, H.M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T.N., Weissig, H., Shindyalov, I.N., and Bourne, P.E. 2000. The Protein Data Bank. Nucleic Acids Res. 28: 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
6
-
-
0026567907
-
Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect
-
Eriksson, A.E., Baase, W.A., Zhang, X.J., Heinz, D.W., Blaber, M., Baldwin, E.P., and Matthews, B.W. 1992. Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect. Science 255: 178-183.
-
(1992)
Science
, vol.255
, pp. 178-183
-
-
Eriksson, A.E.1
Baase, W.A.2
Zhang, X.J.3
Heinz, D.W.4
Blaber, M.5
Baldwin, E.P.6
Matthews, B.W.7
-
8
-
-
0028205447
-
Enlarged representative set of protein structures
-
Hobohm, U. and Sander, C. 1994. Enlarged representative set of protein structures. Protein Sci. 3: 522-524.
-
(1994)
Protein Sci.
, vol.3
, pp. 522-524
-
-
Hobohm, U.1
Sander, C.2
-
9
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch, W. and Sander, C. 1983. Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22: 2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
10
-
-
0013825955
-
Precision space-filling atomic models
-
Koltun, W.L. 1965. Precision space-filling atomic models. Biopolymers 3: 665-679.
-
(1965)
Biopolymers
, vol.3
, pp. 665-679
-
-
Koltun, W.L.1
-
11
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
Laskowski, R.A., MacArthur, M.W., Moss, D.S., and Thornton, J.M. 1993. PROCHECK: A program to check the stereochemical quality of protein structures. J. Appl. Cryst. 26: 283-291.
-
(1993)
J. Appl. Cryst.
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
12
-
-
0015222647
-
The interpretation of protein structures: Estimation of static accessibility
-
Lee, B. and Richards, F.M. 1971. The interpretation of protein structures: Estimation of static accessibility. J. Mol. Biol. 55: 379-400.
-
(1971)
J. Mol. Biol.
, vol.55
, pp. 379-400
-
-
Lee, B.1
Richards, F.M.2
-
13
-
-
0001861319
-
-
(eds. P. Debrunner et al.). University of Illinois Press, Urbana, IL
-
Levinthal, C. 1969. In Mössbauer spectroscopy in biological systems (eds. P. Debrunner et al.), pp. 22-24. University of Illinois Press, Urbana, IL.
-
(1969)
Mössbauer Spectroscopy in Biological Systems
, pp. 22-24
-
-
Levinthal, C.1
-
14
-
-
0017309766
-
Structural patterns in globular proteins
-
Levitt, M. and Chothia, C. 1976. Structural patterns in globular proteins. Nature 261: 552-558.
-
(1976)
Nature
, vol.261
, pp. 552-558
-
-
Levitt, M.1
Chothia, C.2
-
15
-
-
0032780417
-
A complete conformational map for RNA
-
Murthy, V.L., Srinivasan, R., Draper, D.E., and Rose, G.D. 1999. A complete conformational map for RNA. J. Mol. Biol. 291: 313-327.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 313-327
-
-
Murthy, V.L.1
Srinivasan, R.2
Draper, D.E.3
Rose, G.D.4
-
16
-
-
0033730431
-
The flory isolated-pair hypothesis is not valid for polypeptide chains: Implications for protein folding
-
Pappu, R.V., Srinivasan, R., and Rose, G.D. 2000. The flory isolated-pair hypothesis is not valid for polypeptide chains: Implications for protein folding. Proc. Natl. Acad. Sci. 97: 12565-12570.
-
(2000)
Proc. Natl. Acad. Sci.
, vol.97
, pp. 12565-12570
-
-
Pappu, R.V.1
Srinivasan, R.2
Rose, G.D.3
-
18
-
-
73649194755
-
Stereochemistry of polypeptide chain configurations
-
Ramachandran, G.N., Ramakrishnan, C., and Sasisekharan, V. 1963. Stereochemistry of polypeptide chain configurations. J. Mol. Biol. 7: 95-99.
-
(1963)
J. Mol. Biol.
, vol.7
, pp. 95-99
-
-
Ramachandran, G.N.1
Ramakrishnan, C.2
Sasisekharan, V.3
-
19
-
-
0017429069
-
Areas, volumes, packing, and protein structure
-
Richards, F.M. 1977. Areas, volumes, packing, and protein structure. Ann. Rev. Biophys. Bioeng. 6: 151-176.
-
(1977)
Ann. Rev. Biophys. Bioeng.
, vol.6
, pp. 151-176
-
-
Richards, F.M.1
-
20
-
-
0002278852
-
Packing defects, cavities, volume fluctuations, and access to the interior of proteins. Including some general comments on surface area and protein structure
-
-. 1979. Packing defects, cavities, volume fluctuations, and access to the interior of proteins. Including some general comments on surface area and protein structure. Carlsberg Res. Commun. 44: 47-63.
-
(1979)
Carlsberg Res. Commun.
, vol.44
, pp. 47-63
-
-
-
21
-
-
0019443447
-
The anatomy and taxonomy of protein structure
-
Richardson, J.S. 1981. The anatomy and taxonomy of protein structure. Adv. Prot. Chem. 34: 168-340.
-
(1981)
Adv. Prot. Chem.
, vol.34
, pp. 168-340
-
-
Richardson, J.S.1
-
22
-
-
0033405203
-
A physical basis for protein secondary structure
-
Srinivasan, R. and Rose, G.D. 1999. A physical basis for protein secondary structure. Proc. Natl. Acad. Sci. 96: 14258-14263.
-
(1999)
Proc. Natl. Acad. Sci.
, vol.96
, pp. 14258-14263
-
-
Srinivasan, R.1
Rose, G.D.2
-
23
-
-
0029147823
-
Intrinsic φ, ψ propensities of amino acids, derived from the coil regions of known structures
-
Swindells, M.B., MacArthur, M.W., and Thornton, J.M. 1995. Intrinsic φ, ψ propensities of amino acids, derived from the coil regions of known structures. Nat. Struct. Biol. 2: 596-603.
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 596-603
-
-
Swindells, M.B.1
MacArthur, M.W.2
Thornton, J.M.3
-
24
-
-
0004108577
-
-
Prentice Hall, Upper Saddle River, NJ
-
Van Holde, K.E., Johnson, W.C., and Ho, P.S. 1998. Principles of physical biochemistry, pp. 156-162. Prentice Hall, Upper Saddle River, NJ.
-
(1998)
Principles of Physical Biochemistry
, pp. 156-162
-
-
Van Holde, K.E.1
Johnson, W.C.2
Ho, P.S.3
-
25
-
-
0033613812
-
Visualizing and quantifying molecular goodness-of-fit: Small-probe contact dots with explicit hydrogen atoms
-
Word, J.M., Lovell, S.C., LaBean, T.H., Taylor, H.C., Zalis, M.E., Presley, B.K., Richardson, J.S., and Richardson, D.C. 1999. Visualizing and quantifying molecular goodness-of-fit: Small-probe contact dots with explicit hydrogen atoms. J. Mol. Biol. 285: 1711-1733.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 1711-1733
-
-
Word, J.M.1
Lovell, S.C.2
LaBean, T.H.3
Taylor, H.C.4
Zalis, M.E.5
Presley, B.K.6
Richardson, J.S.7
Richardson, D.C.8
-
26
-
-
0000668407
-
Theory of the phase transition between helix and random coil in polypeptide chains
-
Zimm, B.H. and Bragg, J.K. 1959. Theory of the phase transition between helix and random coil in polypeptide chains. J. Chem. Phys. 31: 526-535.
-
(1959)
J. Chem. Phys.
, vol.31
, pp. 526-535
-
-
Zimm, B.H.1
Bragg, J.K.2
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