Psychrobacter alimentarius sp. nov., isolated from squid jeotgal, a traditional Korean fermented seafood

International Journal of Systematic and Evolutionary Microbiology

Volumn 55, Issue 1, 2005, Pages 171-176

  Yoon, Jung Hoon ^a   Yeo, Soo Hwan ^b   Oh, Tae Kwang ^a   Park, Yong Ha ^a  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b Keimyung University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

AMPICILLIN; FATTY ACID; GENTAMICIN; POLYMYXIN B; RNA 16S; SODIUM CHLORIDE; STREPTOMYCIN; TETRACYCLINE; UBIQUINONE;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CHEMOTAXONOMY; CULTURE MEDIUM; DNA CONTENT; FERMENTATION; GENUS; GRAM NEGATIVE BACTERIUM; HALOPHILIC BACTERIUM; KOREA; LIPID COMPOSITION; MOLECULAR PHYLOGENY; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; PSYCHROBACTER; PSYCHROBACTER ALIMENTARIUS; RNA SEQUENCE; SEA FOOD; SEQUENCE HOMOLOGY; SPOROGENESIS; SQUID; STRAIN DIFFERENCE; TEMPERATURE; TYPE STRAIN;

ANIMALS; BASE COMPOSITION; DECAPODIFORMES; DNA, BACTERIAL; FERMENTATION; KOREA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; PSYCHROBACTER; RNA, RIBOSOMAL, 16S; SEAFOOD;

CEPHALOPODA; NEGIBACTERIA; PSYCHROBACTER; PSYCHROBACTER ALIMENTARIUS;

EID: 13244261027     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.63140-0     Document Type: Article

References (28)

1. Bowman, J. P., Cavanagh, J., Austin, J. J. & Sanderson, K. (1996). Novel Psychrobacter species from Antarctic ornithogenic soils. Int J Syst Bacteriol 46, 841-848.
2. Bowman, J. P., Nichols, D. S. & McMeekin, T. A. (1997). Psychrobacter glacincola sp. nov., a halotolerant, psychrophilic bacterium isolated from Antarctic sea ice. Syst Appl Microbiol 20, 209-215.
3. Bozal, N., Montes, M. J., Tudela, E. & Guinea, J. (2003). Characterization of several Psychrobacter strains isolated from Antarctic environments and description of Psychrobacter luti sp. nov. and Psychrobacter fozii sp. nov. Int J Syst Evol Microbiol 53, 1093-1100.
4. Bruns, A., Rohde, M. & Berthe-Corti, L. (2001). Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment. Int J Syst Evol Microbiol 51, 1997-2006.
5. Cowan, S. T. & Steel, K. J. (1965). Manual for the Identification of Medical Bacteria. London: Cambridge University Press.
6. Denner, E. B. M., Mark, B., Busse, H.-J., Turkiewicz, M. & Lubitz, W. (2001). Psychrobacter proteolyticus sp. nov., a psychrotrophic, halotolerant bacterium isolated from the Antarctic krill Euphausia superba Dana, excreting a cold-adapted metalloprotease. Syst Appl Microbiol 24, 44-53.
7. Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonudeic acid hybridization in micro-dilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
8. Juni, E. (1991). The genus Psychrobacter. In The Prokaryotes, pp. 3241-3246. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. New York: Springer.
9. Juni, E. & Heym, G. A. (1986). Psychrobacter immobilis gen. nov., sp. nov.: genospecies composed of gram-negative, aerobic, oxidase-positive coccobacilli. Int J Syst Bacteriol 36 388-391.
10. Kämpfer, P., Albrecht, A., Buczolits, S. & Busse, H.-J. (2002). Psychrobacter faecalis sp. nov., a new species from a bioaerosol originating from pigeon faeces. Syst Appl Microbiol 25, 31-36.
11. Komagata, K. & Suzuki, K. I. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-206.
12. Lanyi, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19 1-67.
13. Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
14. Levring, T. (1946). Some culture experiments with Ulva and artificial seawater. K Fysiogr Sallsk Lund Forh 16 45-56.
15. Maruyama, A., Honda, D., Yamamoto, H., Kitamura, K. & Higashihara, T. (2000). Phylogenetic analysis of psychrophilic bacteria isolated from the Japan Trench, including a description of the deep-sea species Psychrobacter pacificensis sp. nov. Int J Syst Evol Microbiol 50, 835-846.
16. Romanenko, L. A., Schumann, P., Rohde, M., Lysenko, A. M., Mikhailov, V. V. & Stackebrandt, E. (2002). Psychrobacter submarinus sp. nov. and Psychrobacter marincola sp. nov., psychrophilic halophiles isolated from marine environments. Int J Syst Evol Microbiol 52, 1291-1297.
17. Romanenko, L. A., Lysenko, A. M., Rohde, M., Mikhailov, V. V. & Stackebrandt, E. (2004). Psychrobacter maritimus sp. nov. and Psychrobacter arenosus sp. nov., isolated from coastal sea ice and sediments of the Sea of Japan. Int J Syst Evol Microbiol 54 1741-1745.
18. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. Technical Note 101. Newark, DE: MIDI.
19. Shaw, B. G. & Latty, J. B. (1988). A numerical taxonomic study of non-motile non-fermentative Gram-negative bacteria from foods. J Appl Bacteriol 65, 7-21.
20. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
21. Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
22. Vela, A. I., Collins, M. D., Latre, M. V., Mateos, A., Moreno, M. A., Hutson, R., Domínguez, L. & Ferná ndez-Garayzábal, J. F. (2003). Psychrobacter pulmonis sp. nov., isolated from the lungs of lambs. Int J Syst Evol Microbiol 53, 415-419.
23. Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
24. Yoon, J.-H., Kim, H., Kim, S.-B., Kim, H.-J., Kim, W. Y., Lee, S. T., Goodfellow, M. & Park, Y.-H. (1996). Identification of Saccharomonospora strains by the use of genomic DNA fragments and rRNA gene probes. Int J Syst Bacteriol 46, 502-505.
25. Yoon, J.-H., Lee, S. T. & Park, Y.-H. (1998). Inter- and intraspecific phylogenetic analysis of the genus Nocardioides and related taxa based on 16S rDNA sequences. Int J Syst Bacteriol 48, 187-194.
26. Yoon, J.-H., Kang, K. H. & Park, Y.-H. (2003). Psychrobacter jeotgali sp. nov., isolated from jeotgal, a traditional Korean fermented seafood. Int J Syst Evol Microbiol 53, 449-454.
27. Yumoto, I., Hirota, K, Sogabe, Y., Nodasaka, Y., Yokota, Y. & Hoshino, T. (2003). Psychrobacter okhotskensis sp. nov., a lipase-producing facultative psychrophile isolated from the coast of the Okhotsk Sea. Int J Syst Evol Microbiol 53, 1985-1989.
28. Yurkov, V., Stackebrandt, E., Holmes, A. & 7 other authors (1994). Phylogenetic positions of novel aerobic, bacteriochlorophyll a-containing bacteria and description of Roseococcus thiosulfatophilus gen. nov., sp. nov., Erythromicrobium ramosum gen. nov., sp. nov., and Erythrobacter litoralis sp. nov. Int J Syst Bacteriol 44, 427-434.