Phylogenetic position of the small Kashmir flying squirrel, Hylopetes fimbriatus (≡ Eoglaucomys fimbriatus), in the subfamily Pteromyinae

Canadian Journal of Zoology

Volumn 82, Issue 8, 2004, Pages 1336-1342

  Oshida, Tatsuo ^a,f   Shafique, Chaudhry M ^b   Barkati, Sohail ^b   Yasuda, Masatoshi ^c   Hussein, Nor Azman ^d   Endo, Hideki ^e   Yanagawa, Hisashi ^f   Masuda, Ryuichi ^g  

^a TUNGHAI UNIVERSITY   (Taiwan)

^b UNIVERSITY OF KARACHI   (Pakistan)

^c FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

^d FOREST RESEARCH INSTITUTE MALAYSIA   (Malaysia)

^e DEPARTMENT OF BOTANY   (Japan)

^f OBIHIRO UNIVERSITY OF AGRICULTURE AND VETERINARY MEDICINE   (Japan)

^g HOKKAIDO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

FORESTRY; GENES; GENETIC ENGINEERING;

CLUSTERING; PHYLOGENETICS; POLYTOMIC DIVERGENCE; SEQUENCE DATA;

BIODIVERSITY;

PHYLOGENETICS; RODENT;

BIODIVERSITY; CLUMPS; GENES; GENETIC ENGINEERING; TREES;

ASIA; EASTERN HEMISPHERE; EURASIA; NORTH AMERICA; PAKISTAN; SOUTH ASIA; SOUTHEAST ASIA; WESTERN HEMISPHERE; WORLD;

BELOMYS PEARSONII; EOGLAUCOMYS FIMBRIATUS; GLAUCOMYS; HYLOPETES; HYLOPETES LEPIDUS; HYLOPETES PHAYREI; PETAURISTA; PETAURISTINAE; PTEROMYINAE; PTEROMYS; RODENTIA; SCIURIDAE;

EID: 12744260231     PISSN: 00084301     EISSN: None     Source Type: Journal    
DOI: 10.1139/Z04-108     Document Type: Article

References (37)

1. Anderson, S., Bankier, A.T., Barrel, B.C., De Bruijn, M.H.L., Coulson, A.R., Drouin, J. et al. 1981. Sequence and organization of the human mitochondrial genome. Nature (Lond.), 290: 457-465.
2. Black, C.C. 1972. Holarctic evolution and dispersal of squirrels (Rodentia: Sciuridae). Evol. Biol. 6: 305-322.
3. Corbel, G.B., and Hill, J.E. 1992. The mammals of the Indomalayan region: a systematic review. Oxford University Press, Oxford. pp. 308-313.
4. De Bruijn, H. 1999. Superfamily Sciuroidea. In The Miocene land mammals of Europe. Edited by G.E. Rösner and K. Heissing. Verlag Dr. Friedrich Pfeil, Müchen. pp. 271-280.
5. Demboski, J.R., Jacobsen, B.K., and Cook, J.A. 1998. Implications of cytochrome b sequence variation for biogeography and conservation of the northern flying squirrel (Glaucomys sabrinus) of the Alexander Archipelago, Alaska. Can. J. Zool. 76: 1771-1777.
6. Ellerman, J.R. 1947. A key to the Rodentia inhabiting India, Ceylon, and Burma, based on collections in the British Museum. Part I. J. Mammal. 28: 249-278.
7. Ellerman, J.R., and Morrison-Scott, T.C.S. 1966. Checklist of Palaeartic and Indian mammals 1758 to 1946. 2nd ed. British Museum (Natural History), London.
8. Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
9. Hoffmann, R.S., Anderson, C.G., Thorington, R.W., Jr., and Heaney, L.R. 1993. Family Sciuridae. In Mammal species of the world: taxonomic and geographic reference. 2nd ed. Edited by D.E. Wilson and D.M. Reeder. Smithsonian Institution Press, Washington, D.C. pp. 419-466.
10. Honacki, J.H., Kinman, K.E., and Koeppl, J.W. 1982. Mammal species of the world: a taxonomic and geographic reference. Allen Press Inc. and the Association of Systematics Collections, Lawrence, Kans.
11. Howell, A.H. 1915. Description of a new genus and seven new races of flying squirrels. Proc. Biol. Soc. Wash. 28: 109-114.
12. Irwin, D.M., Kocher, T.D., and Wilson, A.C. 1991. Evolution of the cytochrome b gene of the mammals. J. Mol. Evol. 32: 128-144.
13. Lara, M.C., Patton, J.L., and Da Silva, M.N.F. 1996. The simultaneous diversification of South American echimyid rodents (Hystricognathi) based on complete cytochrome b sequences. Mol. Phylogenet. Evol. 5: 403-413.
14. Lessa, E.P., and Cook, J.A. 1998. The molecular phylogenetics of Tuco-Tucos (genus Ctenomys, Rodentia: Octodontidae) suggest an early burst of speciation. Mol. Phylogenet. Evol. 9: 88-99.
15. Martin, Y., Gerlach, G., Schlotterer, C., and Meyer, A. 2000. Molecular phylogeny of European muroid rodents based on complete cytochrome b sequences. Mol. Phylogenet. Evol. 16: 37-47.
16. McKenna, M.C. 1962. Eupetaurista and the living petauristine sciurids. Am. Mus. Novitat. No. 2104: 1-38.
17. McLaughlin, C.A. 1967. Aplodontoid, sciuroid, geomyoid, castoroid, and anomaluroid rodents. In Recent mammals of the world: a synopsis of families. Edited by S. Anderson and J.K. Jones, Jr. Ronald Press, New York. pp. 210-225.
18. McLaughlin, C.A. 1984. Protrogomorph, sciuromorph, castorimorph, myomorph (geomyoid, anomaluroid, pedetoid, and ctenodactyloid) rodents. In Orders and families of recent mammals of the world. Edited by S. Anderson and J.K. Jones, Jr. John Wiley & Sons, New York. pp. 267-288.
19. Mein, P. 1970. Les Sciuropteres (Mammalia, Rodentia) Neogenes d'Europe Occidentale. Geobios (Lyon), 3: 7-77.
20. Mercer, J.M., and Roth, V.L. 2003. The effects of Cenozoic global change on squirrel phylogeny. Science (Wash., D.C.), 299: 1568-1572.
21. Montgelard, C., Bentz, S., Tirard, C., Verneau, O., and Catzeflis, F.M. 2002. Molecular systematics of sciurognathi (rodentia): the mitochondrial cytochrome b and 12S rRNA genes support the Anomaluroidea (Pedetidae and Anomaluridae). Mol. Phylogenet. Evol. 22: 220-233.
22. Nowak, R.M. 1991. Walker's mammals of the world. Vol. 1. 5th ed. The Johns Hopkins University Press, Baltimore, Md.
23. Oshida, T., Lin, L.-K., Masuda, R., and Yoshida, M.C. 2000a. Phylogenetic relationships among Asian species of Petaurista (Rodentia, Sciuridae), inferred from mitochondrial cytochrome b gene sequences. Zool. Sci. (Tokyo) 17: 123-128.
24. Oshida, T., Lin, L.-K., Yanagawa, H., Endo, H., and Masuda, R. 2000e. Phylogenetic relationships among six flying squirrel genera, inferred from mitochondrial cytochrome b gene sequences. Zool. Sci. (Tokyo) 17: 485-489.
25. Piaggio, A.J., and Spicer, G.S. 2001. Molecular phylogeny of the chipmunks inferred from mitochondrial cytochrome b and cytochrome oxidase II gene sequences. Mol. Phylogenet. Evol. 20: 335-350.
26. Posada, D., and Crandall, K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14: 817-818.
27. Reyes, A., Gissi, C., Pesole, G., Catzeflis, F., and Saccone, C. 2000. Where do rodents fit? Evidence from the complete mitochondrial genome of Sciurus vulgalis. Mol. Biol. Evol. 17: 979-983.
28. Roberts, T.J. 1997. The mammals of Pakistan. Oxford University Press, Oxford.
29. Saitou, N., and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
30. Sambrook, J., Fritsch, E.F., and Maniatis, T. 1989. Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor Laboratory, New York.
31. Steppan, S.J., Storz, B.L., and Hoffmann, R.S. 2004. Nuclear DNA of the squirrels (Mammalia: Rodentia) and the evolution of arboreality from c-myc and RAG1. Mol. Phylogenet. Evol. 30: 703-719.
32. Swofford, D.L. 2001. PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4.0b10. Smithsonian Institution, Washington, D.C. and Sinauer Associates, Inc., Sunderland, Mass.
33. Tamura, K., and Nei, M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10: 512-526.
34. Thorington, R.W., Jr., and Darrow, K. 2000. Anatomy of the squirrel wrist: bones, ligaments, and muscles. J. Morphol. 246: 85-102.
35. Thorington, R.W., Jr., Musante, A.L., Anderson, C.G., and Darrow, K. 1996. Validity of three genera of flying squirrels: Eoglaucomys, Glaucomys, and Hylopetes. J. Mammal. 77: 69-83.
36. Thorington, R.W., Jr., Pitassy, D., and Jansa, S.A. 2002. Phylogenies of flying squirrels (Pteromyinae). J. Mammal. Evol. 9: 99-135.
37. Wettstein, P.J., Strausbauch, M., Lamb, T., States, J., Chakraborty, R., Jin, L., and Riblet, R. 1995. Phylogeny of six Sciurus aberti subspecies based on nucleotide sequences of cytochrome b. Mol. Phylogenet. Evol. 4: 150-162.