Analysis of genes developmentally regulated during storage root formation of sweet potato

Journal of Plant Physiology

Volumn 162, Issue 1, 2005, Pages 91-102

  Tanaka, Masaru ^a   Takahata, Yasuhiro ^a   Nakatani, Makoto ^b  

^a NATIONAL AGRICULTURAL RESEARCH CENTER FOR KYUSHU OKINAWA REGION   (Japan)

^b NATIONAL INSTITUTE OF CROP SCIENCE   (Japan)

Author keywords

Gene expression; Ipomoea batatas; Leucine rich repeat receptor like kinase; Somatic embryogenesis receptor like kinase; Storage root; Sweet potato

Indexed keywords

BIOLOGICAL ORGANS; DNA; GENETIC ENGINEERING; METABOLISM; PLANTS (BOTANY); RNA; VEGETATION;

DIFFERENTIAL DISPLAY ANALYSIS; LEUCINE RICH REPEAT (LRR); RECEPTOR LIKE KINASE (RLK); STORAGE ROOTS;

GENES;

GENES; GENETIC ENGINEERING; MERISTEMS; METABOLISM; NUCLEIC ACIDS; PLANTS; ROOTS;

ARABIDOPSIS; ARABIDOPSIS THALIANA; IPOMOEA; IPOMOEA BATATAS; SOLANUM TUBEROSUM;

EID: 12544249509     PISSN: 01761617     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jplph.2004.06.003     Document Type: Article

References (44)

1. P.W. Becraft Receptor kinase signaling in plant development Annu Rev Cell Dev Biol 18 2002 163 192
2. C.K. Bonsi, P.A. Loretan, W.A. Hill, and D.G. Mortley Response of sweet potatoes to continuous light HortScience 27 1992 471
3. P.M. Coutinho, E. Deleury, G.J. Davies, and B. Henrissat An evolving hierarchical family classification for glycosyltransferases J Mol Biol 328 2003 307 317
4. B.D. Ezell, and M.S. Wilcox The ratio of carotene to carotenoid pigments in sweet-potato varieties Science 103 1946 193 194
5. A.R. Fernie, and L. Willmitzer Molecular and biochemical triggers of potato tuber development Plant Physiol 127 2001 1459 1465
6. Gerpacio MTL, Demagante AL, Opena GB, Van'der Zaag P. Growth and yield analysis of 3 sweet potato cultivars under varying photoperiods. In: CIP (Ed.) Potato and Sweet Potato in Southeast Asia and the Pacific Region. IRRI, Los Banos, Laguna (Philippines); 1991. p. 124-132.
7. G. Giuliano, L. Giliberto, and C. Rosati Carotenoid isomerase a tale of light and isomers Trends Plant Sci 7 2002 427 429
8. L.S.B. Goldstein, and A.V. Philp The road less traveled Emerging principles of kinesin motor utilization Annu Rev Cell Dev Biol 15 1999 141 183
9. S.K. Hahn A quantitative approach to source potentials and sink capacities among reciprocal grafts of sweet potato varieties Crop Sci 17 1977 559 562
10. T. Hattori, S. Nakagawa, and K. Nakamura High-level expression of tuberous root storage protein genes of sweet potato in stems of plantlets grown in vitro on sucrose medium Plant Mol Biol 14 1990 595 604
11. V. Hecht, J.P. Vielle-Calzada, M.V. Hartog, E.D.L. Schmidt, K. Boutilier, U. Grossniklaus, and S.C. de Vries The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embyogenic competence in culture Plant Physiol 127 2001 803 816
12. Y. Hozyo, T. Murata, and T. Yoshida The development of tuberous roots in grafting sweet potato plants, Ipomoea batatas Lam Bull Natl Inst Agric Sci 22 1971 165 191
13. S.D. Jackson Multiple signaling pathways control tuber induction in potato Plant Physiol 119 1999 1 8
14. S.H. Kim, K. Mizuno, and T. Fujimura Isolation of MADS-box genes from sweet potato (Ipomoea batatas (L.) Lam.) expressed specifically in vegetative tissues Plant Cell Physiol 43 2002 314 322
15. T. Kokubu Thremmatological studies on the relationship between the structure of tuberous root and its starch accumulating function in sweet potato varieties Bull Fac Agric Kagoshima Univ 23 1973 1 126
16. Y. Kono, and T. Mizoguchi The origin of root periderm in the sweet potato plant, Ipomoea batatas Lam Jpn J Crop Sci 51 1982 535 541
17. C.J. Lawrence, R.L. Malmberg, M.G. Muszynski, and R. Kelly Dawe Maximum likelihood methods reveal conservation of function among closely related kinesin families J Mol Evol 54 2002 42 53
18. X.Q. Li, and D. Zhang Gene expression activity and pathway selection for sucrose metabolism in developing storage root of sweet potato Plant Cell Physiol 44 2003 630 636
19. J. Li, J. Wen, K.A. Lease, J.T. Doke, F.E. Tax, and J.C. Walker BAK1, an Arabidopsis LRR receptor-like protein kinase, interacts with BRI1 and modulates brassinosteroid signaling Cell 110 2002 213 222
20. T. Matsuo, T. Yoneda, and S. Itoo Identification of free cytokinins and the changes in endogenous levels during tuber development of sweet potato Plant Cell Physiol 24 1983 1305 1312
21. T. Matsuo, R. Mitsuzono, R. Okada, and S. Itoo Variation in the levels of major free cytokins and free abscisic acid during tuber development of sweet potato Plant Growth Reg 7 1988 249 258
22. K. Nakamura, M. Ohto, N. Yoshida, and K. Nakamura Sucrose-induced accumulation of β-amylase occurs concomitant with the accumulation of starch and sporamin in leaf-petiole cuttings of sweet potato Plant Physiol 96 1991 902 909
23. M. Nakatani, and M. Komeichi Changes in the endogenous level of zeatin riboside, abscisic acid and indole acetic acid during formation and thickening of tuberous roots in sweet potato Jpn J Crop Sci 60 1991 91 100
24. M. Nakatani, and M. Komeichi Distribution of endogenous zeatin riboside and abscisic acid in tuberous roots of sweet potato Jpn J Crop Sci 60 1991 322 323
25. M. Nakatani, M. Tanaka, and M. Yoshinaga Physiological and anatomical characterization of a late-storage root-forming mutant of sweetpotato J Am Soc Hort Sci 127 2002 178 183
26. K.H. Nam, and J. Li BRI1/BAK1, a receptor kinase pair mediating brassinosteroid signaling Cell 110 2002 203 212
27. M. Otani, T. Shimada, T. Kimura, and A. Saito Transgenic plant production from embryogenic callus of sweet potato (Ipomoea batatas (L.) Lam) using Agrobacterium tumefaciens Plant Biotechnol 15 1998 11 16
28. T.A. Richmond, and C.R. Somerville The cellulose synthase superfamily Plant Physiol 124 2000 495 498
29. N. Saitou, and M. Nei The neighbour-joining method a new method for reconstructing phylogenetic trees Mol Biol Evol 4 1987 406 425
30. E.D.L. Schmidt, F. Guzzo, M.A.J. Toonen, and S.C. de Vries A leucine-rich repeat containing receptor-like kinase marks somatic plant cells competent to form embryos Development 124 1997 2049 2062
31. K. Shah, T.W.J. Gadella Jr, H. van Erp, V. Hecht, and S.C. de Vries Subcellular localization and oligomerization of the Arabidopsis thaliana somatic embryogenesis receptor kinase 1 protein J Mol Biol 309 2001 641 655
32. S.H. Shiu, and A.B. Bleecker Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases Proc Natl Acad Sci USA 98 2001 10763 10768
33. T. Sugiyama, and T. Hashizume Cytokinins in developing tuberous roots of sweet potato (Ipomoea batatas) Agric Biol Chem 53 1989 49 52
34. S. Suye, T. Sugiyama, and T. Hashizume Mass spectrometric determination of ribosyl trans-zeatin from sweet potato tubers (Ipomoea batatas L. cv. Kohkei No. 14) Agric Biol Chem 47 1983 1665 1666
35. Y. Takahata, T. Noda, and T. Sato Relationship between acid invertase activity and hexose content in sweet potato storage roots J Agric Food Chem 44 1996 2063 2066
36. M. Tanaka, M. Yoshinaga, Y. Nakazawa, and M. Nakatani Identification of a novel SINE-like sequence in retrotransposon fragments of sweet potato Plant Biotechnol 18 2001 157 161
37. J.D. Thompson, T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins The ClustalX windows interface flexible strategies for multiple sequence alignment aided by quality analysis tools Nucl Acids Res 24 1997 4876 4882
38. Y. Togari A study in the tuberous-root formation of sweet-potatoes Bull Natl Agric Exp Sta 68 1950 1 96
39. L.A. Wilson, and S.B. Lowe The anatomy of the root system in West Indian sweetpotato (Ipomoea batatas (L.) Lam.) cultivars Ann Bot 37 1973 633 643
40. S. Yanagisawa The Dof family of plant transcription factors Trends Plant Sci 7 2002 555 560
41. Z.H. Ye, and J.E. Varner Tissue-specific expression of cell wall proteins in developing soybean tissues Plant Cell 3 1991 23 37
42. K.T. Yoshida, S. Naito, and G. Takeda cDNA cloning of regeneration-specific genes in rice by differential screening of randomly amplified cDNAs using RAPD primers Plant Cell Physiol 35 1994 1003 1009
43. M. Yoshinaga, M. Tanaka, and M. Nakatani Changes in anthocyanin content and composition of developing storage root of purple-fleshed sweet potato (Ipomoea batatas (L.) Lam) Breeding Sci 50 2000 59 64
44. M.K. You, C.G. Hur, Y.S. Ahn, M.C. Suh, B.C. Jeong, J.S. Shin, and J.M. Bae Identification of genes possibly related to storage root induction in sweetpotato FEBS Lett 536 2003 101 105