Characterization and evolutionary relationship of methionine-rich legumin-like protein from buckwheat

Plant Physiology and Biochemistry

Volumn 42, Issue 2, 2004, Pages 157-163

  Samardžić, Jelena T ^a   Milisavljević, Mira Dj ^a   Brkljačić, Jelena M ^a   Konstantinović, Miroslav M ^a   Maksimović, Vesna R ^a  

^a UNIVERSITY OF BELGRADE   (Serbia)

Author keywords

Buckwheat; Evolution; Legumin; Methionine rich

Indexed keywords

DICOTYLEDONEAE; FAGOPYRUM; FAGOPYRUM ESCULENTUM; GYMNOSPERMAE; LILIOPSIDA; MAGNOLIA; MAGNOLIA SALICIFOLIA; MAGNOLIOPHYTA;

EID: 1242321422     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2003.11.001     Document Type: Article

References (35)

1. Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 215:1990;403-410.
2. Bäumlein H., Wobus U., Pustell J., Kafatos F.C. The legumin gene family: structure of the B type gene of Vicia faba and a possible legumin gene specific regulatory element. Nucleic Acids Res. 14:1986;2707-2720.
3. Brkljačić J., Maksimović V., Radović S., Savić A. Identification of legumin-like storage protein cDNA clone from cDNA library of developing buckwheat seed. Arch. Biol. Sci. 3:1998;15-20.
4. Chenchik A., Diachenko L., Moqadam F., Tarabykin V., Lukyanov S., Siebert P.D. Full-length cDNA cloning and determination of mRNA 5′- and 3′-ends by amplification of adaptor-ligated cDNA. Biotechniques. 21:1996;526-534.
5. Church G.M., Gilbert W. Genomic sequencing. Proc. Natl. Acad. Sci. USA. 817:1984;1991-1995.
6. Dellaporta S.L., Wood J., Hicks J.B. A plant DNA minipreparation: version II. Plant Mol. Biol. Rep. 1:1983;19-21.
7. Derbyshire E., Wright D.J., Bouter D. Legumin and vicilin, storage proteins of legume seeds. Phytochemistry. 15:1976;3-24.
8. Dickinson C.D., Hussein H.A., Nielsen N.C. Role of posttranslational cleavage in glycinin assembly. Plant Cell. 1:1989;459-469.
9. Fariselli P., Riccobelli P., Casadio R. Role of evolutionary information in predicting the disulfide-bonding state of cysteine in proteins. Proteins. 36:1999;340-346.
10. Felsenstein J. PHYLIP (Phylogeny Inference Package) version 3.5c. 1993;Department of Genetics, University of Washington, Seattle.
11. Fischer H., Chen L., Wallisch S. The evolution of angiosperm seed proteins: a methionine-rich legumin subfamily present in lower angiosperm clades. J. Mol. Evol. 43:1996;399-404.
12. Fischer H., Haake V., Horstmann C., Jensen U. Characterization and evolutionary relationships of Magnolia legumin-encoding cDNAs representing two divergent gene subfamilies. Eur. J. Biochem. 229:1995;645-650.
13. Fischer H., Jensen U. Phytoserological investigation of the tribe Cardueae s.l. (Compositae). Plant Sys. Evol. (Suppl. 4):1990;99-111.
14. Fujino K., Funatsuki H., Inada M., Shimono Y., Kikuta Y. Expression, cloning, and immunological analysis of buckwheat (Fagopyrum esculentum Moench) seed storage proteins. J. Agric. Food Chem. 266:2001;608-613.
15. Goldberg R.B., Barker S.J., Perez-Grau L. Regulation of gene expression during plant embryogenesis. Cell. 56:1989;149-160.
16. Häger K.-P., Braun H., Czihal A., Müller B., Bäumlein H. Evolution of seed storage genes: legumin genes of Ginkgo biloba. J. Mol. Evol. 41:1995;457-466.
17. Häger K.-P., Muller B., Wind C., Erbach S., Fischer H. Evolution of legumin genes: loss of an ancestral intron at the beginning of angiosperm diversification. FEBS Lett. 387:1996;94-98.
18. Jin U.H., Jin B.R., Lee J.W., Cho Y.S., Kwon O.C., Kim Y.K., Chung C.H. Characterization of a methionine-rich storage protein cDNA from perilla (Perilla frutescens) seeds. Aust. J. Plant Physiol. 27:2000;701-707.
19. Kimura M. A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:1980;111-120.
20. Maksimović V., Varkonji-Gašić E., Radović S., Savić A. The biosynthesis of 13S buckwheat seed storage protein. J. Plant Physiol. 147:1996;759-761.
21. Maraccini P., Deshayes A., Petiard V., Rogers W.J. Molecular cloning of the complete 11S seed storage protein gene of Coffea arabica and promoter analysis in transgenic tobacco plants. Plant Physiol. Biochem. 37:1999;273-282.
22. Martin W., Lydiate D., Brinkmann H., Forkmann G., Saedler H., Cerff R. Molecular phylogenies in angiosperm evolution. Mol. Biol. Evol. 10:1993;140-162.
23. Nair A., Ohmoto T., Woo S.H., Adachi T. A molecular-genetic approach for hypoallergenic buckwheat. Fagopyrum. 16:1999;29-36.
24. Nielsen H., Engelbrecht J., Brunak S., von Heijne G. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10:1997;1-6.
25. Pomeranz Y., Robbins G.S. Amino acid composition of buckwheat. J. Agric. Food Chem. 20:1972;270-274.
26. Radović S., Maksimović V., Varkonji-Gašić E. Characterization of buckwheat seed storage proteins. J. Agric. Food Chem. 44:1996;972-974.
27. Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:1987;406-425.
28. Shutov A.D., Bäumlein H. Origin and evolution of seed storage globulins. Casey R., Shewry P.R. Seed Proteins. 1999;543-561 Kluwer Academic Publishers ITP, London.
29. Shutov A.D., Braun H., Chesnokov Y.V., Horstmann C., Kakhovskaya I.A., Bäumlein H. Sequence peculiarity of Gnetalean legumin-like seed storage proteins. J. Mol. Evol. 47:1998;486-492.
30. Simpson G.G., Filipowicz W. Splicing of precursors to mRNA in higher plants: mechanisms, regulation and sub-nuclear organisation of the spliceosomal machinery. Plant Mol. Biol. 32:1996;1-41.
31. Sjödahl S., Rödin J., Rask L. Characterization of the 12S globulin complex of Brassica napus. Evolutionary relationships to other 11-12S storage globulins. Eur. J. Biochem. 196:1991;617-621.
32. Stothard P. The sequence manipulation suite: JavaScript programs for analyzing and formatting protein and DNA sequences. Biotechniques. 28:2000;1102-1104.
33. Tai S., Wu L., Chen E., Tzen J. Molecular cloning of 11S globulin and 2S albumin, the two major seed storage proteins in sesame. J. Agric. Food Chem. 47:1999;4932-4938.
34. Taylor B., Powell A. Isolation of plant DNA and RNA. Focus. 4:1982;4-6.
35. Templeman T.S., DeMaggio A.E. Biochemistry of fern spore proteins: globulin storage proteins in Onoclea sensibilis and Osmunda Cinnamomea. Am. J. Bot. 77:1990;284-287.