Molecular cloning of the complete 11S seed storage protein gene of Coffea arabica and promoter analysis in transgenic tobacco plants

Plant Physiology and Biochemistry

Volumn 37, Issue 4, 1999, Pages 273-282

  Marraccini, Pierre ^a   Deshayes, Alain ^a   Pétiard, Vincent ^a   Rogers, William John ^a  

^a NESTLÉ RESEARCH CENTER   (Switzerland)

Author keywords

11S storage protein; Coffea arabica; Coffee genetic engineering; Endosperm specific promoter

Indexed keywords

BETA GLUCURONIDASE; CAULIFLOWER MOSAIC VIRUS; DELETION MUTAGENESIS; GENE EXPRESSION REGULATION; INVERSE POLYMERASE CHAIN REACTION; MOLECULAR CLONING; NICOTIANA; PLANT GENOME; PROMOTER REGION; REPORTER GENE; SEED STORAGE PROTEIN; TRANSGENIC PLANT;

COFFEA ARABICA;

EID: 0033056544     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0981-9428(99)80025-4     Document Type: Article

References (45)

1. Allen R.D., Bernier F., Lessard P.A., Beachy R.N. Nuclear factors interact with a soybean β-conglycinin enhancer. Plant Cell. 1:1989;623-631.
2. An G., Ebert P.R., Mitra A., Ha S.B. Binary vectors. Gelvin S.B, Schilperoort R.A, Verma D.P.S. Plant Molecular Biology Manual. 1993;A3/1-A3/19 Kluwer Academic Publishers, Dordrecht.
3. Bäumlein H., Nagy I., Villarroel R., Inzé D., Wobus U. Cis-analysis of a seed protein gene promoter: the conservative RY repeat CATGCATG within the legumin box is essential for tissue-specific expression of a legumin gene. Plant J. 2:1992;233-239.
4. Benfey P.N., Chua N.H. The cauliflower mosaic virus 35S promoter: combinatorial regulation of transcription in plants. Science. 250:1990;959-966.
5. Bolle C., Sopory S., Lübberstedt T., Herrmann R.G., Oelmüller R. Segments encoding 5'-untranslated leaders of genes for thylakoid proteins contains cis-elements essential for transcription. Plant J. 6:1994;513-523.
6. Bolle C., Herrmann R.G., Oelmüller R. Different sequences for 5'-untranslated leaders of nuclear genes for plastid proteins affect the expression of the β-glucuronidase gene. Plant Mol. Biol. 32:1996;861-868.
7. Chamberlan S., Daigle N., Bernier F. The legumin boxes and the 3' part of a soybean β-conglycinin promoter are involved in seed gene expression in transgenic tobacco plants. Plant Mol. Biol. 19:1992;937-949.
8. Dean C., Tamaki S., Dunsmuir P., Favreau M., Katayama C., Dooner H., Bedbrook J. mRNA transcripts of several genes are polyadenylated at multiple sites in vivo. Nucleic Acids Res. 14:1986;2229-2240.
9. Dickinson C.D., Evans R.P., Nielsen N.C. RY repeats are conserved in the 5'-flanking region of legume seed protein genes. Nucleic Acids Res. 16:1988;371.
10. Feng D.F., Doolittle R.F. Progressive sequence alignment as a prerequisite to correct phylogenic trees. J. Mol. Evol. 25:1987;351-360.
11. Goldberg R.B., Baker S.J., Perez-Grau L. Regulation of gene expression during plant embryogenesis. Cell. 56:1989;149-160.
12. Häger K.P., Braun H., Czihal A., Müller B., Bäumlein H. Evolution of seed storage protein genes: legumin genes of Ginkgo biloba. J. Mol. Evol. 41:1995;457-466.
13. Hammond-Kosack M.C.U., Holdworth M.J., Bevan M.W. In vitro footprinting of a low molecular weight glutenin gene (LMWG-1D1) in wheat endosperm. EMBO J. 12:1993;545-554.
14. Horsch R.B., Fry J., Hoffmann N., Neidermeyer J., Rogers S.G., Fraley R.T. Leaf disk transformation. Gelvin S.B, Schilperoort R.A, Verma D.P.S. Plant Molecular Biology Manual. 1993;A5/1-A5/9 Kluwer Academic Publishers, Dordrecht.
15. Jefferson R.A., Kavanagh T.A., Bevan M.W. GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6:1987;3901-3907.
16. Kawagoe Y., Murai N. Four distinct nuclear proteins recognize in vitro the proximal promoter of the bean seed storage protein β-phaseolin gene conferring spatial and temporal control. Plant J. 2:1992;927-936.
17. Kawagoe Y., Campbell B.R., Murai N. Synergism between CACGTG (G-box) and CACCTG cis-elements is required for activation of the bean seed storage protein β-phaseolin gene. Plant J. 5:1994;885-890.
18. Koncz C., Schell J. The promoter of the TL-DNA gene 5 controls the tissue-specific expression of chimeric genes carried by a novel type of Agrobacterium binary vector. Mol. Gen. Genet. 204:1986;383-396.
19. Lelievre J.M., Oliveira L.O., Nielsen N.C. 5'-CATGCAT-3'elements modulate the expression of glycinin genes. Plant Physiol. 98:1992;387-391.
20. Leroy T., Royer M., Paillard M., Berthouly M., Spiral J., Tessereau S., Legavre T., Altosaar I. Introduction de gènes d'intérêt agronomique dans l'espèce Coffea canephora Pierre par transformation avec Agrobacterium sp. Proceedings of the 17th International Scientific Colloquium on Coffee, Kenya, International Scientific Association on Coffee, Paris. 1997;439-446.
21. Lundberg K.S., Shoemaker D.D., Adams M.W.W., Short J.M., Sorge J.A., Mathur E.J. High fidelity amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus. Gene. 108:1991;1-6.
22. Maier U.G., Brown J.W.S., Toloczyki C., Feix G. Binding of a nuclear factor to a consensus sequence in the 5' flanking region of zein genes from maize. EMBO J. 6:1987;17-22.
23. Müller M., Knudsen S. The nitrogen response of a barley C-hordein promoter is controlled by positive and negative regulation of the GCN4 and endosperm box. Plant J. 4:1993;343-355.
24. Murashige T., Skoog F. A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol. Plant. 15:1962;473-497.
25. Ochman H., Gerber A.S., Hartl D.L. Genetic applications of an inverse polymerase chain reaction. Genetics. 120:1988;621-623.
26. Paillard M., Lashermes P., Pétiard V. Construction of a molecular linkage map in coffee. Theor. Appl. Genet. 93:1996;41-47.
27. Pang P.P., Pruitt R.E., Meyerowitz E.M. Molecular cloning, genomic organization, expression and evolution of 12S seed storage protein genes of Arabidopsis thaliana. Plant. Mol. Biol. 11:1988;805-820.
28. de Pater S., Pham K., Chua N.H., Memelink J., Kijne J. A 22-bp fragment of the pea lectin promoter containing essential TGAC-like motifs confers seed-specific gene expression. Plant Cell. 5:1993;877-886.
29. de Pater S., Katagiri F., Kijne J., Chua N.H. bZIP proteins bind to a palindromic sequence without an ACGT core located in a seed-specific element of the pea lectin promoter. Plant Cell. 6:1994;133-140.
30. Peach C., Velten T. Transgene expression variability (position effect) of CAT and GUS reporter genes driven by linked divergent T-DNA promoters. Plant Mol. Biol. 17:1991;49-60.
31. Rogers W.J., Bézard G., Deshayes A., Meyer I., Pétiard V., Marraccini P. Biochemical and molecular characterization and expression of the 11S-type storage protein from Coffea arabica endosperm. Plant Physiol. Biochem. 37:1999;261-272.
32. Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning, a Laboratory Manual. 1989;Cold Spring Harbor Laboratory Press, New York.
33. Schmidt R.J., Ketudat M., Aukerman M.J., Hoschek G. Opaque-2 is a transcriptional activator that recognizes a specific target site in 22-kD zein genes. Plant Cell. 4:1992;689-700.
34. Shewry P.R. Plant storage proteins. Biol. Rev. 70:1995;375-426.
35. Shirsat A.H. Control of gene expression in the developing seed. Grierson D. Developmental Regulation of Plant Gene Expression. 1991;153-181 Chapman and Hall, New York.
36. Shirsat A.H., Wilford N., Croy R., Boulter D. Sequences responsible for tissue specific promoter activity of a pea legumin gene in tobacco. Mol. Gen. Genet. 215:1989;326-331.
37. Simpson G.G., Filipowicz W. Splicing of precursors to mRNA in higher plants: mechanisms, regulation and sub-nuclear organisation of the spliceosomal machinery. Plant Mol. Biol. 32:1996;1-41.
38. Spiral J., Thierry C., Paillard M., Pétiard V. Obtention de plantules de Coffea canephora Pierre (Robusta) transformées par Agrobacterium rhizogenes. C. R. Acad. Sci. Paris Sér. III. 316:1993;1-6.
39. Southern E.M. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:1975;503-517.
40. Schuch U.K., Fuchigami L.H., Nagao M.A. Flowering, ethylene production, and ion leakage of coffee in response to water stress and gibberellic acid. J. Am. Soc. Hort. Sci. 117:1992;158-163.
41. Thomas T.L. Gene expression during plant embryogenesis and germination: an overview. Plant Cell. 5:1993;1401-1410.
42. Thomas T.L., Flavell R.B. Identification of an enhancer element for the endosperm-specific expression of high molecular weight glutenin. Plant Cell. 2:1990;1171-1180.
43. van der Geest A.H.M., Hall T.C. A 68 bp element of the β-phaseolin promoter functions as a seed-specific enhancer. Plant Mol. Biol. 32:1996;579-588.
44. Wood W.I., Gitschier J., Lasky L.A., Lawn R.M. Base composition-independent hybridization in tetramethylammonium chloride: A method for oligonucleotide screening of highly complex gene libraries. Proc. Natl. Acad. Sci. USA. 82:1985;1585-1588.
45. Yuffa A.M., de Garcia E.G., Nieto M.S. Comparative study of protein electrophoretic patterns during embryogenesis in Coffea arabica cv. Catimor. Plant Cell Rep. 13:1994;197-202.