Sequential multiple functions of the conserved sequence in sequence-specific termination by T7 RNA polymerase

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 1, 2005, Pages 75-80

  Sohn, Younghee ^a   Kang, Changwon ^a  

^a Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

Author keywords

Class II termination; Elongation complex stability; Photocross linking; Polymerase; RNA protein interaction; Stepwise walking of RNA

Indexed keywords

DOUBLE STRANDED DNA; RNA POLYMERASE; SINGLE STRANDED DNA;

ARTICLE; BASE PAIRING; COMPLEX FORMATION; CONFORMATIONAL TRANSITION; CROSS LINKING; DNA RNA HYBRIDIZATION; DNA TEMPLATE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN RNA BINDING; SIGNAL TRANSDUCTION;

BASE SEQUENCE; CONSERVED SEQUENCE; DNA-DIRECTED RNA POLYMERASES; ESCHERICHIA COLI; MOLECULAR SEQUENCE DATA; TEMPERATURE; TRANSCRIPTION, GENETIC; VIRAL PROTEINS;

ESCHERICHIA COLI;

EID: 11844299658     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0406581101     Document Type: Article

References (22)

1. Hartvig, L. & Christiansen, J. (1996) EMBO J. 15, 4767-4774.
2. Macdonald, L. E., Durbin, R. K., Dunn, J. J. & McAllister, W. T. (1994) J. Mol. Biol. 238, 145-158.
3. Whelan, S. P., Ball, L. A., Barr, J. N. & Wertz, G. T. (1995) Proc. Natl. Acad. Sci. USA 92, 8388-8392.
4. Lyakhov, D. L., He, B., Zhang, X., Studier, F. W., Dunn, J. J. & McAllister, W. T. (1997) J. Mol. Biol. 269, 28-40.
5. Kwon, Y. S. & Kang, C. (1999) J. Biol. Chem. 274, 29149-29155.
6. He, B., Kukarin, A., Temiakov, D., Chin-Bow, S. T., Lyakhov, D. L., Rong, M., Durbin, R. K. & McAllister, W. T. (1998) J. Biol. Chem. 273, 18802-10811.
7. Macdonald, L. E., Zhou, Y. & McAllister, W. T. (1993) J. Mol. Biol. 232, 1030-1047.
8. Song, H. & Kang, C. (2001) Genes Cells 6, 291-301.
9. Boudvillain, M., Schwartz, A. & Rahmouni, A. R. (2002) Biochemistry 41, 3137-3146.
10. Mukherjee, S., Brieba, L. G. & Sousa, R. (2003) EMBO J. 22, 6483-6493.
11. Artsimovitch, I. & Landick, R. (1998) Genes Dev. 12, 3110-3122.
12. Sohn, Y., Shen, H. & Kang, C. (2003) Methods Enzymol. 371, 170-179.
13. Shen, H. & Kang, C. (2001) J. Biol. Chem. 276, 4080-4084.
14. Temiakov, D., Mentesana, P. E., Ma, K., Mustaev, A., Borukhov, S. & McAllister, W. T. (2000) Proc. Natl. Acad. Sci. USA 97, 14109-14114.
15. Kashlev, M. & Komissarova, N. (2002) J. Biol. Chem. 277, 14501-14508.
16. Gusarov, I. & Nudler, E. (1999) Mol. Cell 3, 495-504.
17. Ikeda, R. A. & Richardson, C. C. (1986) Proc. Natl. Acad. Sci. USA 83, 3614-3618.
18. Mookhtiar, K. A., Peluso, P. S., Muller, D. K., Dunn, J. J. & Coleman, J. E. (1991) Biochemistry 30, 6305-6313.
19. Basu, S. & Maitra, U. (1986) J. Mol. Biol. 190, 425-437.
20. Huang, J. & Sousa, R. (2000) J. Mol. Biol. 303, 347-358.
21. Tahirov, T. H., Temiakov, D., Anikin, M., Patlan, V., McAllister, W. T., Vassylyev, D. G. & Yokoyama, S. (2002) Nature 420, 43-50.
22. Ma, K., Temiakov, D., Jiang, M., Anikin, M. & McAllister, W. T. (2002) J. Biol. Chem. 277, 43206-43215.