-
1
-
-
0003000419
-
Did the RNA world exploit an expanded genetic alphabet?
-
R.F. Gesteland, T.R. Cech, & J.F. Atkins. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Benner S.A., Burgstaller P., Battersby T.R., Jurczyk S. Did the RNA world exploit an expanded genetic alphabet? Gesteland R.F., Cech T.R., Atkins J.F. The RNA World. 1999;163-181 Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1999)
The RNA World
, pp. 163-181
-
-
Benner, S.A.1
Burgstaller, P.2
Battersby, T.R.3
Jurczyk, S.4
-
2
-
-
0042848694
-
A novel, modification-dependent ATP-binding aptamer selected from an RNA library incorporating a cationic functionality
-
Vaish N.K., Larralde R., Fraley A.W., Szostak J.W., McLaughlin L.W. A novel, modification-dependent ATP-binding aptamer selected from an RNA library incorporating a cationic functionality. Biochemistry. 42:2003;8842-8851.
-
(2003)
Biochemistry
, vol.42
, pp. 8842-8851
-
-
Vaish, N.K.1
Larralde, R.2
Fraley, A.W.3
Szostak, J.W.4
McLaughlin, L.W.5
-
3
-
-
17344372249
-
Modified oligonucleotides: Synthesis and strategy for users
-
Verma S., Eckstein F. Modified oligonucleotides. synthesis and strategy for users Annu. Rev. Biochem. 67:1998;99-134.
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 99-134
-
-
Verma, S.1
Eckstein, F.2
-
4
-
-
0035206749
-
In vitro selection of RNA aptamers carrying multiple biotin groups in the side chains
-
Ito Y., Suzuki A., Kawazoe N., Imanishi Y. In vitro selection of RNA aptamers carrying multiple biotin groups in the side chains. Bioconjug. Chem. 12:2001;850-854.
-
(2001)
Bioconjug. Chem.
, vol.12
, pp. 850-854
-
-
Ito, Y.1
Suzuki, A.2
Kawazoe, N.3
Imanishi, Y.4
-
5
-
-
0035897140
-
Phe nucleotides containing the subunits of Thermus thermophilus phenylalanyl-tRNA synthetase by photoaffinity crosslinking
-
Phe nucleotides containing the subunits of Thermus thermophilus phenylalanyl-tRNA synthetase by photoaffinity crosslinking. Biochim. Biophys. Acta. 1518:2001;226-236.
-
(2001)
Biochim. Biophys. Acta
, vol.1518
, pp. 226-236
-
-
Moor, N.A.1
Ankilova, V.N.2
Lavrik, O.I.3
Favre, A.4
-
6
-
-
0034284164
-
Expanding the structural and functional diversity of RNA: Analog uridine triphosphates as candidates for in vitro selection of nucleic acids
-
Vaish N.K., Fraley A.W., Szostak J.W., McLaughlin L.W. Expanding the structural and functional diversity of RNA. analog uridine triphosphates as candidates for in vitro selection of nucleic acids Nucleic Acids Res. 28:2000;3316-3322.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3316-3322
-
-
Vaish, N.K.1
Fraley, A.W.2
Szostak, J.W.3
McLaughlin, L.W.4
-
7
-
-
0033594331
-
Characteristics of an RNA Diels-Alderase active site
-
Tarasow T.M., Tarasow S.L., Tu C., Kellogg E., Eaton B.E. Characteristics of an RNA Diels-Alderase active site. J. Am. Chem. Soc. 121:1999;3614-3617.
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 3614-3617
-
-
Tarasow, T.M.1
Tarasow, S.L.2
Tu, C.3
Kellogg, E.4
Eaton, B.E.5
-
8
-
-
0029557118
-
Using in vitro selection to direct the covalent attachment of human immunodeficiency virus type 1 Rev protein to high-affinity RNA ligands
-
Jensen K.B., Atkinson B.L., Willis M.C., Koch T.H., Gold L. Using in vitro selection to direct the covalent attachment of human immunodeficiency virus type 1 Rev protein to high-affinity RNA ligands. Proc. Natl. Acad. Sci. USA. 92:1995;12220-12224.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 12220-12224
-
-
Jensen, K.B.1
Atkinson, B.L.2
Willis, M.C.3
Koch, T.H.4
Gold, L.5
-
9
-
-
0025912789
-
A specific, UV-induced RNA-protein cross-link using 5-bromouridine- substituted RNA
-
Gott J.M., Willis M.C., Koch T.H., Uhlenbeck O.C. A specific, UV-induced RNA-protein cross-link using 5-bromouridine-substituted RNA. Biochemistry. 30:1991;6290-6295.
-
(1991)
Biochemistry
, vol.30
, pp. 6290-6295
-
-
Gott, J.M.1
Willis, M.C.2
Koch, T.H.3
Uhlenbeck, O.C.4
-
10
-
-
0000477103
-
Enzymatic synthesis of biotin-labeled polynucleotides: Novel nucleic acid affinity probes
-
Langer P.R., Waldrop A.A., Ward D.C. Enzymatic synthesis of biotin-labeled polynucleotides. novel nucleic acid affinity probes Proc. Natl. Acad. Sci. USA. 78:1981;6633-6637.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 6633-6637
-
-
Langer, P.R.1
Waldrop, A.A.2
Ward, D.C.3
-
11
-
-
0027492904
-
Enzymatic recognition of the base pair between isocytidine and isoguanosine
-
Switzer C.Y., Moroney S.E., Benner S.A. Enzymatic recognition of the base pair between isocytidine and isoguanosine. Biochemistry. 32:1993;10489-10496.
-
(1993)
Biochemistry
, vol.32
, pp. 10489-10496
-
-
Switzer, C.Y.1
Moroney, S.E.2
Benner, S.A.3
-
12
-
-
0025008851
-
Enzymatic incorporation of a new base pair into DNA and RNA extends the genetic alphabet
-
Piccirilli J.A., Krauch T., Moroney S.E., Benner S.A. Enzymatic incorporation of a new base pair into DNA and RNA extends the genetic alphabet. Nature. 343:1990;33-37.
-
(1990)
Nature
, vol.343
, pp. 33-37
-
-
Piccirilli, J.A.1
Krauch, T.2
Moroney, S.E.3
Benner, S.A.4
-
13
-
-
0000615415
-
6-(6-aminohexyl)isoguanosine, into RNA
-
6-(6-aminohexyl)isoguanosine, into RNA. J. Am. Chem. Soc. 115:1993;4461-4467.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 4461-4467
-
-
Tor, Y.1
Dervan, P.B.2
-
14
-
-
0038450208
-
C-5 modified nucleosides: Direct insertion of alkynyl-thio functionality in pyrimidines
-
Held H.A., Roychowdhury A., Benner S.A. C-5 modified nucleosides. Direct insertion of alkynyl-thio functionality in pyrimidines Nucleosides Nucleotides Nucleic Acids. 22:2003;391-404.
-
(2003)
Nucleosides Nucleotides Nucleic Acids
, vol.22
, pp. 391-404
-
-
Held, H.A.1
Roychowdhury, A.2
Benner, S.A.3
-
15
-
-
0036713391
-
Challenging artificial genetic systems: Thymidine analogs with 5-position sulfur functionality
-
Held H.A., Benner S.A. Challenging artificial genetic systems. thymidine analogs with 5-position sulfur functionality Nucleic Acids Res. 30:2002;3857-3869.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3857-3869
-
-
Held, H.A.1
Benner, S.A.2
-
16
-
-
0035953049
-
Synthesis of a modified thymidine monomer for site-specific incorporation of reporter groups into oligonucleotides
-
Brown L.J., May J.P., Brown T. Synthesis of a modified thymidine monomer for site-specific incorporation of reporter groups into oligonucleotides. Tetrahedron Lett. 42:2001;2587-2591.
-
(2001)
Tetrahedron Lett.
, vol.42
, pp. 2587-2591
-
-
Brown, L.J.1
May, J.P.2
Brown, T.3
-
17
-
-
0032476840
-
Expanding the potential of DNA for binding and catalysis: Highly functionalized dUTP derivatives that are substrates for thermostable DNA polymerases
-
Sakthivel K., Barbas C.F. III. Expanding the potential of DNA for binding and catalysis. highly functionalized dUTP derivatives that are substrates for thermostable DNA polymerases Angew. Chem. Int. Ed. Engl. 37:1998;2872-2875.
-
(1998)
Angew. Chem. Int. Ed. Engl.
, vol.37
, pp. 2872-2875
-
-
Sakthivel, K.1
Barbas III, C.F.2
-
18
-
-
0029161984
-
New uridine derivatives for systematic evolution of RNA ligands by exponential enrichment
-
Dewey T.M., Mundt A.A., Crouch G.J., Zyzniewski M.C., Eaton B.E. New uridine derivatives for systematic evolution of RNA ligands by exponential enrichment. J. Am. Chem. Soc. 117:1995;8474-8475.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 8474-8475
-
-
Dewey, T.M.1
Mundt, A.A.2
Crouch, G.J.3
Zyzniewski, M.C.4
Eaton, B.E.5
-
19
-
-
0028124707
-
5-Heteroaryl-2′-deoxyuridine analogs. Synthesis and incorporation into high-affinity oligonucleotides
-
Gutierrez A.J., Terhorst T.J., Matteucci M.D., Froehler B.C. 5-Heteroaryl-2′-deoxyuridine analogs. Synthesis and incorporation into high-affinity oligonucleotides. J. Am. Chem. Soc. 116:1994;5540-5544.
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 5540-5544
-
-
Gutierrez, A.J.1
Terhorst, T.J.2
Matteucci, M.D.3
Froehler, B.C.4
-
20
-
-
0027418105
-
Oligonucleotides derived from 5-(1-propynyl)-2′-O-allyl-cytidine: Synthesis and RNA duplex formation
-
Froehler B.C., Jones R.J., Cao X., Terhorst T.J. Oligonucleotides derived from 5-(1-propynyl)-2′-O-allyl-cytidine. synthesis and RNA duplex formation Tetrahedron Lett. 34:1993;1003-1006.
-
(1993)
Tetrahedron Lett.
, vol.34
, pp. 1003-1006
-
-
Froehler, B.C.1
Jones, R.J.2
Cao, X.3
Terhorst, T.J.4
-
21
-
-
0020591152
-
Structural requirements of olefinic 5-substituted deoxyuridines for antiherpes activity
-
Goodchild J., Porter R.A., Raper R.H., Sim I.S., Upton R.M., Viney J., Wadsworth H.J. Structural requirements of olefinic 5-substituted deoxyuridines for antiherpes activity. J. Med. Chem. 26:1983;1252-1257.
-
(1983)
J. Med. Chem.
, vol.26
, pp. 1252-1257
-
-
Goodchild, J.1
Porter, R.A.2
Raper, R.H.3
Sim, I.S.4
Upton, R.M.5
Viney, J.6
Wadsworth, H.J.7
-
22
-
-
27544440920
-
Nucleic acid related compounds. 39. Efficient conversion of 5-iodo to 5-alkynyl and derived 5-substituted uracil bases and nucleosides
-
Robins M.J., Barr P.J. Nucleic acid related compounds. 39. Efficient conversion of 5-iodo to 5-alkynyl and derived 5-substituted uracil bases and nucleosides. J. Org. Chem. 48:1983;1854-1862.
-
(1983)
J. Org. Chem.
, vol.48
, pp. 1854-1862
-
-
Robins, M.J.1
Barr, P.J.2
-
23
-
-
0033579380
-
Structure of a transcribing T7 RNA polymerase initiation complex
-
Cheetham G.M.T., Steitz T.A. Structure of a transcribing T7 RNA polymerase initiation complex. Science. 286:1999;2305-2309.
-
(1999)
Science
, vol.286
, pp. 2305-2309
-
-
Cheetham, G.M.T.1
Steitz, T.A.2
-
24
-
-
0034697465
-
Synthesis of 3-(2-deoxy-β-D-ribofuranosyl)pyrimidin-2-one and 2-amino-6-(N,N-dimethylamino)-9-(2-deoxy-β-D-ribofuranosyl)purine derivatives for an unnatural base pair
-
Ishikawa M., Hirao I., Yokoyama S. Synthesis of 3-(2-deoxy-β-D- ribofuranosyl)pyrimidin-2-one and 2-amino-6-(N,N-dimethylamino)-9-(2-deoxy- β-D-ribofuranosyl)purine derivatives for an unnatural base pair. Tetrahedron Lett. 41:2000;3931-3934.
-
(2000)
Tetrahedron Lett.
, vol.41
, pp. 3931-3934
-
-
Ishikawa, M.1
Hirao, I.2
Yokoyama, S.3
-
25
-
-
0035942246
-
Unnatural base pairs for specific transcription
-
Ohtsuki T., Kimoto M., Ishikawa M., Mitsui T., Hirao I., Yokoyama S. Unnatural base pairs for specific transcription. Proc. Natl. Acad. Sci. USA. 98:2000;4922-4925.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 4922-4925
-
-
Ohtsuki, T.1
Kimoto, M.2
Ishikawa, M.3
Mitsui, T.4
Hirao, I.5
Yokoyama, S.6
-
26
-
-
0035921119
-
Synthesis of 6-(2-thienyl)purine nucleoside derivatives that form unnatural base pairs with pyrimidin-2-one nucleosides
-
Fujiwara T., Kimoto M., Sugiyama H., Hirao I., Yokoyama S. Synthesis of 6-(2-thienyl)purine nucleoside derivatives that form unnatural base pairs with pyrimidin-2-one nucleosides. Bioorg. Med. Chem. Lett. 11:2001;2221-2223.
-
(2001)
Bioorg. Med. Chem. Lett.
, vol.11
, pp. 2221-2223
-
-
Fujiwara, T.1
Kimoto, M.2
Sugiyama, H.3
Hirao, I.4
Yokoyama, S.5
-
27
-
-
0036168140
-
An unnatural base pair for incorporating amino acid analogs into proteins
-
Hirao I., Otsuki T., Fujiwara T., Mitsui T., Yokogawa T., Okuni T., Nakayama H., Takio K., Kigawa T., Kodama K.et al. An unnatural base pair for incorporating amino acid analogs into proteins. Nat. Biotechnol. 20:2002;177-182.
-
(2002)
Nat. Biotechnol.
, vol.20
, pp. 177-182
-
-
Hirao, I.1
Otsuki, T.2
Fujiwara, T.3
Mitsui, T.4
Yokogawa, T.5
Okuni, T.6
Nakayama, H.7
Takio, K.8
Kigawa, T.9
Kodama, K.10
-
28
-
-
0031792598
-
Efficient replication between non-hydrogen-bonded nucleoside shape analogs
-
Morales J.C., Kool E.T. Efficient replication between non-hydrogen-bonded nucleoside shape analogs. Nat. Struct. Biol. 5:1998;950-954.
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 950-954
-
-
Morales, J.C.1
Kool, E.T.2
-
29
-
-
0033578081
-
A specific partner for abasic damage in DNA
-
Matray T.J., Kool E.T. A specific partner for abasic damage in DNA. Nature. 399:1999;704-708.
-
(1999)
Nature
, vol.399
, pp. 704-708
-
-
Matray, T.J.1
Kool, E.T.2
-
30
-
-
84982076000
-
The iodination of monohydroxypyridines to monohydroxyiodopyridines
-
Broekman F.W., Tendeloo H.J.C. The iodination of monohydroxypyridines to monohydroxyiodopyridines. Recueil. 81:1962;107-111.
-
(1962)
Recueil
, vol.81
, pp. 107-111
-
-
Broekman, F.W.1
Tendeloo, H.J.C.2
-
31
-
-
0037955524
-
An unnatural hydrophobic base pair with shape complementarity between pyrrole-2-carbaldehyde and 9-methylimidazo[(4,5)-b]pyridine
-
Mitsui T., Kitamura A., Kimoto M., To T., Sato A., Hirao I., Yokoyama S. An unnatural hydrophobic base pair with shape complementarity between pyrrole-2-carbaldehyde and 9-methylimidazo[(4,5)-b]pyridine. J. Am. Chem. Soc. 125:2003;5298-5307.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 5298-5307
-
-
Mitsui, T.1
Kitamura, A.2
Kimoto, M.3
To, T.4
Sato, A.5
Hirao, I.6
Yokoyama, S.7
-
32
-
-
0036163867
-
Anti-(Raf-1) RNA aptamers that inhibit Ras-induced Raf-1 activation
-
Kimoto M., Shirouzu M., Mizutani S., Koide H., Kaziro Y., Hirao I., Yokoyama S. Anti-(Raf-1) RNA aptamers that inhibit Ras-induced Raf-1 activation. Eur. J. Biochem. 269:2002;697-704.
-
(2002)
Eur. J. Biochem.
, vol.269
, pp. 697-704
-
-
Kimoto, M.1
Shirouzu, M.2
Mizutani, S.3
Koide, H.4
Kaziro, Y.5
Hirao, I.6
Yokoyama, S.7
-
33
-
-
0032571293
-
Interactions of the amino acid residue at position 31 of the c-Ha-Ras protein with Raf-1 and RalGDS
-
Shirouzu M., Morinaka K., Koyama S., Hu C.-D., Hori-Tamura N., Okada T., Kariya K., Kataoka T., Kikuchi A., Yokoyama S. Interactions of the amino acid residue at position 31 of the c-Ha-Ras protein with Raf-1 and RalGDS. J. Biol. Chem. 273:1998;7737-7742.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 7737-7742
-
-
Shirouzu, M.1
Morinaka, K.2
Koyama, S.3
Hu, C.-D.4
Hori-Tamura, N.5
Okada, T.6
Kariya, K.7
Kataoka, T.8
Kikuchi, A.9
Yokoyama, S.10
-
35
-
-
0037143649
-
Addition of a photocrosslinking amino acid to the genetic code of Escherichia coli
-
Chin J.W., Martin A.B., King D.S., Wang L., Schultz P.G. Addition of a photocrosslinking amino acid to the genetic code of Escherichia coli. Proc. Natl. Acad. Sci. USA. 99:2002;11020-11024.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 11020-11024
-
-
Chin, J.W.1
Martin, A.B.2
King, D.S.3
Wang, L.4
Schultz, P.G.5
-
36
-
-
0042631224
-
Rna lego: Magnesium-dependent formation of specific rna assemblies through kissing interactions
-
Horiya S., Li X., Kawai G., Saito R., Katoh A., Kobayashi K., Harada K. Rna lego. magnesium-dependent formation of specific rna assemblies through kissing interactions Chem. Biol. 10:2003;645-654.
-
(2003)
Chem. Biol.
, vol.10
, pp. 645-654
-
-
Horiya, S.1
Li, X.2
Kawai, G.3
Saito, R.4
Katoh, A.5
Kobayashi, K.6
Harada, K.7
-
37
-
-
0034679465
-
Tecto-RNA: One-dimensional self-assembly through tertiary interactions
-
Jaeger L., Leontis N.B. Tecto-RNA. one-dimensional self-assembly through tertiary interactions Angew. Chem. Int. Ed. Engl. 39:2000;2521-2524.
-
(2000)
Angew. Chem. Int. Ed. Engl.
, vol.39
, pp. 2521-2524
-
-
Jaeger, L.1
Leontis, N.B.2
-
38
-
-
0032490948
-
Design and self-assembly of two-dimensional DNA crystals
-
Winfree E., Liu F., Wenzler L.A., Seeman N.C. Design and self-assembly of two-dimensional DNA crystals. Nature. 394:1998;539-544.
-
(1998)
Nature
, vol.394
, pp. 539-544
-
-
Winfree, E.1
Liu, F.2
Wenzler, L.A.3
Seeman, N.C.4
-
39
-
-
0036043690
-
Structure and function of phi29 hexameric RNA that drives the viral DNA packaging motor: Review
-
Guo P. Structure and function of phi29 hexameric RNA that drives the viral DNA packaging motor. review Prog. Nucleic Acid Res. Mol. Biol. 72:2002;415-472.
-
(2002)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.72
, pp. 415-472
-
-
Guo, P.1
-
40
-
-
0036669413
-
Dimensionality is the issue: Use of photoaptamers in protein microarrays
-
Petach H., Gold L. Dimensionality is the issue. use of photoaptamers in protein microarrays Curr. Opin. Biotechnol. 13:2002;309-314.
-
(2002)
Curr. Opin. Biotechnol.
, vol.13
, pp. 309-314
-
-
Petach, H.1
Gold, L.2
-
41
-
-
0033403758
-
The use of aptamers in large arrays for molecular diagnostics
-
Brody E.N., Willis M.C., Smith J.D., Jayasena S., Zichi D., Gold L. The use of aptamers in large arrays for molecular diagnostics. Mol. Diagn. 4:1999;381-388.
-
(1999)
Mol. Diagn.
, vol.4
, pp. 381-388
-
-
Brody, E.N.1
Willis, M.C.2
Smith, J.D.3
Jayasena, S.4
Zichi, D.5
Gold, L.6
-
42
-
-
0031021689
-
Synthesis of 3-(β-D-ribofuranosyl)-2-fluoropyridine and 3-(β-D-ribofuranosyl)-pyridin-2-one
-
Matulic-Adamic J., Beigelman L. Synthesis of 3-(β-D-ribofuranosyl)- 2-fluoropyridine and 3-(β-D-ribofuranosyl)-pyridin-2-one. Tetrahedron Lett. 38:1997;203-206.
-
(1997)
Tetrahedron Lett.
, vol.38
, pp. 203-206
-
-
Matulic-Adamic, J.1
Beigelman, L.2
-
43
-
-
0023748537
-
Simple synthesis of 5-vinyl- and 5-ethynyl-2′-deoxyuridine- 5′-triphosphates
-
Kovács T., Ötvös L. Simple synthesis of 5-vinyl- and 5-ethynyl-2′-deoxyuridine-5′-triphosphates. Tetrahedron Lett. 29:1988;4525-4528.
-
(1988)
Tetrahedron Lett.
, vol.29
, pp. 4525-4528
-
-
Kovács, T.1
Ötvös, L.2
|