-
1
-
-
0035162989
-
The pattern of tegument-capsid interaction in the herpes simplex virus type 1 virion is not influenced by the small hexon-associated protein VP26
-
Chen, D.H., Jakana, J., McNab, D., Mitchell, J., Zhou, Z.H., Dougherty, M., Chiu, W. and Rixon, F.J. (2001) "The pattern of tegument-capsid interaction in the herpes simplex virus type 1 virion is not influenced by the small hexon-associated protein VP26", J. Virol. 75, 11863.
-
(2001)
J. Virol.
, vol.75
, pp. 11863
-
-
Chen, D.H.1
Jakana, J.2
McNab, D.3
Mitchell, J.4
Zhou, Z.H.5
Dougherty, M.6
Chiu, W.7
Rixon, F.J.8
-
2
-
-
0002426629
-
The chipping forecast
-
Editorial
-
Editorial (1999) "The chipping forecast", Nature Genet. 21(1).
-
(1999)
Nature Genet.
, vol.21
, Issue.1
-
-
-
3
-
-
0030862620
-
Steric factors influencing hybridisation of nucleic acids to oligonucleotide arrays
-
Shchepinov, M.S., Case-Green, S.C. and Southern, E.M. (1997) "Steric factors influencing hybridisation of nucleic acids to oligonucleotide arrays", Nucleic Acids Res. 25, 1155.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 1155
-
-
Shchepinov, M.S.1
Case-Green, S.C.2
Southern, E.M.3
-
4
-
-
0035588097
-
A study of DNA tethered to a surface by an all-atom molecular dynamics simulation
-
Wong, K.-Y and Pettitt, B.M. (2001) "A study of DNA tethered to a surface by an all-atom molecular dynamics simulation", Theor. Chem. Acc. 106, 233.
-
(2001)
Theor. Chem. Acc.
, vol.106
, pp. 233
-
-
Wong, K.-Y.1
Pettitt, B.M.2
-
5
-
-
0001232644
-
Thermodynamics of association to a molecule immobilized in an electric double layer
-
Vainrub, A. and Pettitt, B.M. (2000) "Thermodynamics of association to a molecule immobilized in an electric double layer", Chem. Phys. Lett. 323, 160.
-
(2000)
Chem. Phys. Lett.
, vol.323
, pp. 160
-
-
Vainrub, A.1
Pettitt, B.M.2
-
6
-
-
0036286851
-
Solvation and hydration of proteins and nucleic acids: A theoretical view of simulation and experiment
-
Makarov, V., Pettitt, B.M. and Feig, M. (2002) "Solvation and hydration of proteins and nucleic acids: A theoretical view of simulation and experiment", Acc. Chem. Res. 35, 376.
-
(2002)
Acc. Chem. Res.
, vol.35
, pp. 376
-
-
Makarov, V.1
Pettitt, B.M.2
Feig, M.3
-
8
-
-
0034810598
-
Nearly instantaneous, cation-independent, high selectivity nucleic acid hybridization to DNA microarrays
-
Belosludtsev, Y., Belosludtsev, I., Iverson, B., Lemeshko, S., Wiese, R., Hogan, M. and Powdrill, T. (2001) "Nearly instantaneous, cation-independent, high selectivity nucleic acid hybridization to DNA microarrays", Biochem. Biophys. Res. Commun. 282, 1263.
-
(2001)
Biochem. Biophys. Res. Commun.
, vol.282
, pp. 1263
-
-
Belosludtsev, Y.1
Belosludtsev, I.2
Iverson, B.3
Lemeshko, S.4
Wiese, R.5
Hogan, M.6
Powdrill, T.7
-
9
-
-
0035873312
-
DNA microarrays based on noncovalent oligonucleotide attachment and hybridization in two dimensions
-
Belosludtsev, Y., Iverson, B., Lemeshko, S., Eggers, R., Wiese, R., Lee, S., Powdrill, T. and Hogan, M. (2001) "DNA microarrays based on noncovalent oligonucleotide attachment and hybridization in two dimensions", Anal. Biochem. 292, 250-256.
-
(2001)
Anal. Biochem.
, vol.292
, pp. 250-256
-
-
Belosludtsev, Y.1
Iverson, B.2
Lemeshko, S.3
Eggers, R.4
Wiese, R.5
Lee, S.6
Powdrill, T.7
Hogan, M.8
-
10
-
-
0035879008
-
Oligonucleotides form a duplex with non-helical properties on a positively charged surface
-
Lemeshko, S.V.T., Powdrill, T., Belosludtsev, Y.Y. and Hogan, M. (2001) "Oligonucleotides form a duplex with non-helical properties on a positively charged surface", Nucleic Acids Res. 29, 3051-3058.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3051-3058
-
-
Lemeshko, S.V.T.1
Powdrill, T.2
Belosludtsev, Y.Y.3
Hogan, M.4
-
11
-
-
0034839605
-
Acceleration of nucleic acid hybridization on DNA microarrays driven by pH tunable modifications
-
Zhang, P.M., Briones, N., Liu, C.G., Brush, C.K., Powdrill, T., Belosludtsev, Y. and Hogan, M. (2001) "Acceleration of nucleic acid hybridization on DNA microarrays driven by pH tunable modifications", Nucleosides Nucleotides Nucleic Acids 20, 1251-1254.
-
(2001)
Nucleosides Nucleotides Nucleic Acids
, vol.20
, pp. 1251-1254
-
-
Zhang, P.M.1
Briones, N.2
Liu, C.G.3
Brush, C.K.4
Powdrill, T.5
Belosludtsev, Y.6
Hogan, M.7
-
12
-
-
0000199319
-
A new boundary condition for computer simulations of interfacial systems
-
Wong, K.-Y. and Pettitt, B.M. (2000) "A new boundary condition for computer simulations of interfacial systems", Chem. Phys. Lett. 326, 193.
-
(2000)
Chem. Phys. Lett.
, vol.326
, pp. 193
-
-
Wong, K.-Y.1
Pettitt, B.M.2
-
13
-
-
0000249602
-
A detailed model of local structure and silanol hydrogen bonding of silica gel surfaces
-
Chuang, I.-S. and Maciel, G.E. (1997) "A detailed model of local structure and silanol hydrogen bonding of silica gel surfaces", J. Phys. Chem. B 101, 3052.
-
(1997)
J. Phys. Chem. B
, vol.101
, pp. 3052
-
-
Chuang, I.-S.1
Maciel, G.E.2
-
16
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of protein
-
MacKerell, A.D., Jr, et al. (1998) "All-atom empirical potential for molecular modeling and dynamics studies of protein", J. Phys. Chem. B 102, 3586.
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 3586
-
-
MacKerell Jr., A.D.1
-
17
-
-
0348244547
-
All-atom empirical force field for nucleic acids: I. Parameter optimization based on small molecule and condensed phase macromolecular target data
-
Foloppe, N. and MacKerell, A.D., Jr. (2000) "All-atom empirical force field for nucleic acids: I. Parameter optimization based on small molecule and condensed phase macromolecular target data", J. Comput. Chem. 21, 86.
-
(2000)
J. Comput. Chem.
, vol.21
, pp. 86
-
-
Foloppe, N.1
MacKerell Jr., A.D.2
-
19
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W.L., Chandrasekhar, J., Madura, J.D., Impey, R.W. and Klein, M.L. (1983) "Comparison of simple potential functions for simulating liquid water", J. Chem. Phys. 79, 926.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
20
-
-
0001655657
-
Finite representation of an infinite bulk system: Solvent boundary potential for computer simulations
-
Beglov, D. and Roux, B. (1994) "Finite representation of an infinite bulk system: Solvent boundary potential for computer simulations", J. Chem. Phys. 100, 9050.
-
(1994)
J. Chem. Phys.
, vol.100
, pp. 9050
-
-
Beglov, D.1
Roux, B.2
-
21
-
-
11144270398
-
-
Smith, P.E., Holder, M.E., Dang, L.X., Feig, M. and Pettitt, B.M. (1996) ESP (University of Houston, Houston)
-
Smith, P.E., Holder, M.E., Dang, L.X., Feig, M. and Pettitt, B.M. (1996) ESP (University of Houston, Houston).
-
-
-
-
23
-
-
0001786236
-
Simulation of electrostatic systems in periodic boundary conditions I. Lattice sums and dielectric constants
-
de Leeuw, S.W., Perram, J.W. and Smith, E.R. (1980) "Simulation of electrostatic systems in periodic boundary conditions I. Lattice sums and dielectric constants", Proc. R. Soc. Lond. A373, 27.
-
(1980)
Proc. R. Soc. Lond.
, vol.A373
, pp. 27
-
-
De Leeuw, S.W.1
Perram, J.W.2
Smith, E.R.3
-
24
-
-
36749110571
-
A computer simulation method for the calculation of equilibrium constants for the formation of physical clusters of molecules: Application to small water clusters
-
Swope, W.C., Andersen, H.C., Berens, P.H. and Wilson, K.R. (1982) "A computer simulation method for the calculation of equilibrium constants for the formation of physical clusters of molecules: application to small water clusters", J. Chem. Phys. 76, 637.
-
(1982)
J. Chem. Phys.
, vol.76
, pp. 637
-
-
Swope, W.C.1
Andersen, H.C.2
Berens, P.H.3
Wilson, K.R.4
-
25
-
-
48749148224
-
Rattle: A velocity version of the Shake algorithm for molecular dynamics calculations
-
Andersen, H.C. (1983) "Rattle: a velocity version of the Shake algorithm for molecular dynamics calculations", J. Comput. Phys. 52, 24.
-
(1983)
J. Comput. Phys.
, vol.52
, pp. 24
-
-
Andersen, H.C.1
-
26
-
-
0032520637
-
Parallel thermodynamic analysis of duplexes on oligodeoxyribonucleotide microchips
-
Fotin, A.V., Drobyshey, A.L., Prudnikov, D.Y., Petrov, A.N. and Mirzabekov, A.D. (1998) "Parallel thermodynamic analysis of duplexes on oligodeoxyribonucleotide microchips", Nucleic Acids Res. 26, 1515.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1515
-
-
Fotin, A.V.1
Drobyshey, A.L.2
Prudnikov, D.Y.3
Petrov, A.N.4
Mirzabekov, A.D.5
-
27
-
-
0348195767
-
Thermodynamics of duplex formation and mismatch discrimination on photolithographically synthesized oligonucleotide arrays
-
Forman, J.E., Walton, I.D., Stern, D., Rava, R.P. and Trulson, M.O. (1998) "Thermodynamics of duplex formation and mismatch discrimination on photolithographically synthesized oligonucleotide arrays", ASC Symposium Series 682, 206.
-
(1998)
ASC Symposium Series
, vol.682
, pp. 206
-
-
Forman, J.E.1
Walton, I.D.2
Stern, D.3
Rava, R.P.4
Trulson, M.O.5
-
28
-
-
0001147362
-
Electrostatic interactions between a charged sphere and a charged planar surface in an electrolyte solution
-
Stahlberg, J., Appelgren, U. and Jonsson, B. (1995) "Electrostatic interactions between a charged sphere and a charged planar surface in an electrolyte solution", J. Colloid Interface Sci. 176, 397.
-
(1995)
J. Colloid Interface Sci.
, vol.176
, pp. 397
-
-
Stahlberg, J.1
Appelgren, U.2
Jonsson, B.3
-
29
-
-
0000186290
-
Electrical double layer interaction between dissimilar spherical colloidal particles and between a sphere and a plate: Nonlinear Poisson-Boltzmann theory
-
Stankovich, J. and Garnie, S.L. (1996) "Electrical double layer interaction between dissimilar spherical colloidal particles and between a sphere and a plate: Nonlinear Poisson-Boltzmann theory", Langmuir 12, 1453.
-
(1996)
Langmuir
, vol.12
, pp. 1453
-
-
Stankovich, J.1
Garnie, S.L.2
-
30
-
-
0039736600
-
Calculations of double-layer electrostatic interactions for the sphere/plane geometry
-
Warszynski, P. and Adamczyk, Z. (1997) "Calculations of double-layer electrostatic interactions for the sphere/plane geometry", J. Colloid Interface Sci. 187, 283.
-
(1997)
J. Colloid Interface Sci.
, vol.187
, pp. 283
-
-
Warszynski, P.1
Adamczyk, Z.2
-
31
-
-
30244578100
-
Electrostatic interaction of an ion-penetrable sphere with a hard plate: Contribution of image interaction
-
Ohshima, H. and Kondo, T. (1993) "Electrostatic interaction of an ion-penetrable sphere with a hard plate: Contribution of image interaction", J. Colloid Interface Sci. 157, 504.
-
(1993)
J. Colloid Interface Sci.
, vol.157
, pp. 504
-
-
Ohshima, H.1
Kondo, T.2
-
32
-
-
0033525668
-
Modeling high-resolution hydration patterns in correlation with DNA sequence and conformation
-
Feig, M. and Pettitt, B.M. (1999) "Modeling high-resolution hydration patterns in correlation with DNA sequence and conformation", J. Mol Biol. 286, 1075.
-
(1999)
J. Mol Biol.
, vol.286
, pp. 1075
-
-
Feig, M.1
Pettitt, B.M.2
-
33
-
-
0035957341
-
Electrostatic surface plasmon resonance: Direct electric fieldinduced hybridization and denaturation in monolayer nucleic acid films and label-free discrimination of base mismatches
-
Heaton, R.J., Peterson, A.W. and Georgiadis, R.M. (2001) "Electrostatic surface plasmon resonance: Direct electric fieldinduced hybridization and denaturation in monolayer nucleic acid films and label-free discrimination of base mismatches", Proc. Natl Acad. Sci. USA 98, 3701.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 3701
-
-
Heaton, R.J.1
Peterson, A.W.2
Georgiadis, R.M.3
-
34
-
-
85036155972
-
Coulomb blockage of hybridization in two-dimensional DNA arrays
-
Vainrub, A. and Pettitt, B.M. (2002) "Coulomb blockage of hybridization in two-dimensional DNA arrays", Phys. Rev. E 66, 041905.
-
(2002)
Phys. Rev. E
, vol.66
, pp. 041905
-
-
Vainrub, A.1
Pettitt, B.M.2
-
35
-
-
0037319670
-
Surface electrostatic effects in oligonucleotide microarrays: Control and optimization of binding thermodynamics
-
Vainrub, A. and Pettitt, B.M. (2003) "Surface electrostatic effects in oligonucleotide microarrays: Control and optimization of binding thermodynamics", Biopolymers 68, 265.
-
(2003)
Biopolymers
, vol.68
, pp. 265
-
-
Vainrub, A.1
Pettitt, B.M.2
-
36
-
-
0029583784
-
Stacking free energy profiles for all 16 natural ribodinucleoside monophosphates in aqueous solution
-
Norberg, J. and Nilsson, L. (1995) "Stacking free energy profiles for all 16 natural ribodinucleoside monophosphates in aqueous solution", J. Am. Chem. Soc. 117, 10832.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 10832
-
-
Norberg, J.1
Nilsson, L.2
|