DNA microarrays based on noncovalent oligonucleotide attachment and hybridization in two dimensions

Analytical Biochemistry

Volumn 292, Issue 2, 2001, Pages 250-256

  Belosludtsev, Yuri ^a   Iverson, Bonnie ^a   Lemeshko, Sergey ^b   Eggers, Rick ^a   Wiese, Rick ^a   Lee, Sandy ^a   Powdrill, Tom ^a   Hogan, Mike ^a,b  

^a Genometrix Inc   (United States)

^b BAYLOR COLLEGE OF MEDICINE   (United States)

Author keywords

DNA microarrays; Oligonucleotide attachment; Two dimensional hybridization

Indexed keywords

BINDING ENERGY; BIOCHIPS; PROBES;

BINDING AFFINITIES; DNA MICRO-ARRAY; ELECTROSTATIC ADSORPTION; MICRO FLUIDIC APPLICATIONS; OLIGONUCLEOTIDE PROBES; POSITIVELY CHARGED SURFACES; SINGLE NUCLEOTIDE POLYMORPHISMS; SINGLE NUCLEOTIDES;

OLIGONUCLEOTIDES;

ACETIC ANHYDRIDE; DNA; GLASS; OLIGONUCLEOTIDE; SUCCINIC ANHYDRIDE;

ADSORPTION; ARTICLE; BASE MISPAIRING; BINDING AFFINITY; DNA MICROARRAY; ELECTRICITY; HYBRIDIZATION; ONCOGENE K RAS; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 0035873312     PISSN: 00032697     EISSN: None     Source Type: Journal    
DOI: 10.1006/abio.2001.5088     Document Type: Article

References (14)

1. Collins, F. S. (1999) Microarrays and macroconsequences. Nat. Genet. Suppl. 21, 2.
2. Lander, E. S. (1999) Array of hope. Nat. Genet. Suppl. 21, 3-4.
3. Ramsay, G. (1998) DNA chips: State-of-the art. Nat. Biotechnol. 16, 40-44.
4. Ausubel, F. M., et al. (1997) Current Protocols in Molecular Biology Units 2.9 and 3.10. Wiley, New York.
5. Lee, G. U., Chrisey, L. A., and Colton, R. J. (1994) Direct measurement of the forces between complimentary strands of DNA. Science 266, 771-773.
6. Guo, Z., Guilfoyle, R. A., Thiel, A. J., Wang, R., and Smith, L. M. (1994) Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports. Nucleic Acids Res. 22, 5456-5465.
7. Eggers, M., et al. (1994) A microchip for quantitative detection of molecules utilizing luminescent and radioisotope reporter groups. BioTechniques 17, 516-524.
8. Duggan, D. J., Bittner, M., Chen, Y., Meltzer, P., and Trent, J. M. (1999) Expression profiling using cDNA microarrays. Nat. Genet. Suppl. 21, 10-14.
9. Chrisey, L. A., Lee, G. U., and O'Ferrall, C. E. (1996) Covalent attachment of synthetic DNA to self-assembled monolayer films. Nucleic Acids Res. 24, 3031-3039.
10. Maldonado-Rodriguez, R., Espinosa-Lara, M., Calixto-Suarez, A., Beattie, W. G., and Beattie, K. L. (1999) Hybridization of glasstethered oligonucleotide probes to target strands preannealed with labeled auxiliary oligonucleotides. Mol. Biotechnol. 11, 1-12.
11. Haugland, R. P. (1996) Handbook of Fluorescent Probes and Research Chemicals, 6th ed., pp. 117-120. Molecular Probes, Inc., Eugene, OR.
12. Fang, Y., and Hoh, J. H. (1998) Surface-directed DNA condensation in the absence of soluble multivalent cations. Nucleic Acids Res. 26, 588-593.
13. Balladur, V., Theretz, A., and Mandrand, B. (1997) Determination of the main forces driving DNA oligonucleotide adsorption onto animated silica wafers. J. Colloid Interface Sci. 194, 408-418.
14. Ebara, Y., Mizutani, K, and Okahata, Y. (2000) DNA hybridization at the air-water interface. Langmuir 16, 2416-2418.