-
1
-
-
0029932580
-
Analysis of protein conformational characteristics related to thermostability
-
Querol E, Perez-Pons JA, Mozo-Villarias A. Analysis of protein conformational characteristics related to thermostability. Protein Eng 1996;9:265-271.
-
(1996)
Protein Eng
, vol.9
, pp. 265-271
-
-
Querol, E.1
Perez-Pons, J.A.2
Mozo-Villarias, A.3
-
2
-
-
0011186093
-
Protein thermal stability: Hydrogen bonds or internal packing?
-
Vogt G, Argos P. Protein thermal stability: hydrogen bonds or internal packing? Fold Des 1997;2:S40-S46.
-
(1997)
Fold Des
, vol.2
-
-
Vogt, G.1
Argos, P.2
-
5
-
-
0031808074
-
A helix propensity scale based on experimental studies of peptides and proteins
-
Pace CN, Scholtz JM. A helix propensity scale based on experimental studies of peptides and proteins. Biophys J 1998;75:422-427.
-
(1998)
Biophys J
, vol.75
, pp. 422-427
-
-
Pace, C.N.1
Scholtz, J.M.2
-
6
-
-
0037907569
-
Noncharged amino acid residues at the solvent-exposed positions in the middle and at the C terminus of the alpha-helix have the same helical propensity
-
Ermolenko DN, Richardson JM, Makhatadze GI. Noncharged amino acid residues at the solvent-exposed positions in the middle and at the C terminus of the alpha-helix have the same helical propensity. Protein Sci 2003;12:1169-1176.
-
(2003)
Protein Sci
, vol.12
, pp. 1169-1176
-
-
Ermolenko, D.N.1
Richardson, J.M.2
Makhatadze, G.I.3
-
7
-
-
0034702772
-
Contribution of the 30/36 hydrophobic contact at the C-terminus of the alpha-helix to the stability of the ubiquitin molecule
-
Thomas ST, Makhatadze GI. Contribution of the 30/36 hydrophobic contact at the C-terminus of the alpha-helix to the stability of the ubiquitin molecule. Biochemistry 2000;39:10275-10283.
-
(2000)
Biochemistry
, vol.39
, pp. 10275-10283
-
-
Thomas, S.T.1
Makhatadze, G.I.2
-
8
-
-
0035845493
-
Hydration of the peptide backbone largely defines the thermodynamic propensity scale of residues at the C′ position of the C-capping box of alpha-helices
-
Thomas ST, Loladze VV, Makhatadze GI. Hydration of the peptide backbone largely defines the thermodynamic propensity scale of residues at the C′ position of the C-capping box of alpha-helices. Proc Natl Acad Sci USA 2001;98:10670-10675.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 10670-10675
-
-
Thomas, S.T.1
Loladze, V.V.2
Makhatadze, G.I.3
-
9
-
-
0036297743
-
Thermodynamic consequences of burial of polar and non-polar amino acid residues in the protein interior
-
Loladze VV, Ermolenko DN, Makhatadze GI. Thermodynamic consequences of burial of polar and non-polar amino acid residues in the protein interior. J Mol Biol 2002;320:343-357.
-
(2002)
J Mol Biol
, vol.320
, pp. 343-357
-
-
Loladze, V.V.1
Ermolenko, D.N.2
Makhatadze, G.I.3
-
10
-
-
0036971209
-
Hydrophobic interactions at the Ccap position of the C-capping motif of alpha-helices
-
Ermolenko DN, Thomas ST, Aurora R, Gronenborn AM, Makhatadze GI. Hydrophobic interactions at the Ccap position of the C-capping motif of alpha-helices. J Mol Biol 2002;322:123-135.
-
(2002)
J Mol Biol
, vol.322
, pp. 123-135
-
-
Ermolenko, D.N.1
Thomas, S.T.2
Aurora, R.3
Gronenborn, A.M.4
Makhatadze, G.I.5
-
11
-
-
0000188566
-
Measuring protein thermostability by differential scanning calorimetry
-
Coligan JE, Dunn BM, Ploegh HL, Speicher DW, Wingfield PT, editors. New York: Wiley
-
Makhatadze GI. Measuring protein thermostability by differential scanning calorimetry. In: Coligan JE, Dunn BM, Ploegh HL, Speicher DW, Wingfield PT, editors. Current protocols in protein chemistry. Vol. 2. New York: Wiley; 1998. p 7.9.1-7.9.14.
-
(1998)
Current Protocols in Protein Chemistry
, vol.2
-
-
Makhatadze, G.I.1
-
13
-
-
0023234618
-
Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin
-
Vijay-Kumar S, Bugg CE, Wilkinson KD, Vierstra RD, Hatfield PM, Cook WJ. Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin. J Biol Chem 1987;262:6396-6399.
-
(1987)
J Biol Chem
, vol.262
, pp. 6396-6399
-
-
Vijay-Kumar, S.1
Bugg, C.E.2
Wilkinson, K.D.3
Vierstra, R.D.4
Hatfield, P.M.5
Cook, W.J.6
-
14
-
-
0023644679
-
Structure of ubiquitin refined at 1.8 Å resolution
-
Vijay-Kumar S, Bugg CE, Cook WJ. Structure of ubiquitin refined at 1.8 Å resolution. J Mol Biol 1987;194:531-544.
-
(1987)
J Mol Biol
, vol.194
, pp. 531-544
-
-
Vijay-Kumar, S.1
Bugg, C.E.2
Cook, W.J.3
-
15
-
-
0026010011
-
Analysis of the interaction between charged side chains and the alpha-helix dipole using designed thermostable mutants of phage T4 lysozyme
-
Nicholson H, Anderson DE, Dao-pin S, Matthews BW. Analysis of the interaction between charged side chains and the alpha-helix dipole using designed thermostable mutants of phage T4 lysozyme. Biochemistry 1991;30:9816-9828.
-
(1991)
Biochemistry
, vol.30
, pp. 9816-9828
-
-
Nicholson, H.1
Anderson, D.E.2
Dao-Pin, S.3
Matthews, B.W.4
-
16
-
-
0017881332
-
The alpha-helix dipole and the properties of proteins
-
Hol WG, van Duijnen PT, Berendsen HJ. The alpha-helix dipole and the properties of proteins. Nature 1978;273:443-446.
-
(1978)
Nature
, vol.273
, pp. 443-446
-
-
Hol, W.G.1
Van Duijnen, P.T.2
Berendsen, H.J.3
-
17
-
-
0030005250
-
Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides
-
Wimley WC, Creamer TP, White SH. Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides. Biochemistry 1996;35:5109-5124.
-
(1996)
Biochemistry
, vol.35
, pp. 5109-5124
-
-
Wimley, W.C.1
Creamer, T.P.2
White, S.H.3
-
18
-
-
0025222978
-
A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids
-
O'Neil KT, DeGrado WF. A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids. Science 1990;250:646-651.
-
(1990)
Science
, vol.250
, pp. 646-651
-
-
O'Neil, K.T.1
DeGrado, W.F.2
-
19
-
-
0025260032
-
Side chain contributions to the stability of alpha-helical structure in peptides
-
Lyu PC, Liff MI, Marky LA, Kallenbach NR. Side chain contributions to the stability of alpha-helical structure in peptides. Science 1990;250:669-673.
-
(1990)
Science
, vol.250
, pp. 669-673
-
-
Lyu, P.C.1
Liff, M.I.2
Marky, L.A.3
Kallenbach, N.R.4
-
20
-
-
0026674251
-
Alpha-helix stability in proteins: II. Factors that influence stability at an internal position
-
Horovitz A, Matthews JM, Fersht AR. Alpha-helix stability in proteins: II. Factors that influence stability at an internal position. J Mol Biol 1992;227:560-568.
-
(1992)
J Mol Biol
, vol.227
, pp. 560-568
-
-
Horovitz, A.1
Matthews, J.M.2
Fersht, A.R.3
-
21
-
-
0027236794
-
Structural basis of amino acid alpha helix propensity
-
Blaber M, Zhang XJ, Matthews BW. Structural basis of amino acid alpha helix propensity. Science 1993;260:1637-1640.
-
(1993)
Science
, vol.260
, pp. 1637-1640
-
-
Blaber, M.1
Zhang, X.J.2
Matthews, B.W.3
-
22
-
-
0028178528
-
Determination of alpha-helix propensity within the context of a folded protein: Sites 44 and 131 in bacteriophage T4 lysozyme
-
Blaber M, Zhang XJ, Lindstrom JD, Pepiot SD, Baase WA, Matthews BW. Determination of alpha-helix propensity within the context of a folded protein: sites 44 and 131 in bacteriophage T4 lysozyme. J Mol Biol 1994;235:600-624.
-
(1994)
J Mol Biol
, vol.235
, pp. 600-624
-
-
Blaber, M.1
Zhang, X.J.2
Lindstrom, J.D.3
Pepiot, S.D.4
Baase, W.A.5
Matthews, B.W.6
-
23
-
-
0026709329
-
Alpha-helix stability in proteins: I. Empirical correlations concerning substitution of side-chains at the N and C-caps and the replacement of alanine by glycine or serine at solvent-exposed surfaces
-
Serrano L, Sancho J, Hirshberg M, Fersht AR. Alpha-helix stability in proteins: I. Empirical correlations concerning substitution of side-chains at the N and C-caps and the replacement of alanine by glycine or serine at solvent-exposed surfaces. J Mol Biol 1992;227:544-559.
-
(1992)
J Mol Biol
, vol.227
, pp. 544-559
-
-
Serrano, L.1
Sancho, J.2
Hirshberg, M.3
Fersht, A.R.4
-
24
-
-
0028178865
-
Alpha-helix-forming propensities in peptides and proteins
-
Creamer TP, Rose GD. Alpha-helix-forming propensities in peptides and proteins. Proteins 1994;19:85-97.
-
(1994)
Proteins
, vol.19
, pp. 85-97
-
-
Creamer, T.P.1
Rose, G.D.2
-
25
-
-
0038275884
-
Testing hypotheses about determinants of protein structure with high-precision, high-throughput stability measurements and statistical modeling
-
Yi F, Sims DA, Pielak GJ, Edgell MH. Testing hypotheses about determinants of protein structure with high-precision, high-throughput stability measurements and statistical modeling. Biochemistry 2003;42:7594-7603.
-
(2003)
Biochemistry
, vol.42
, pp. 7594-7603
-
-
Yi, F.1
Sims, D.A.2
Pielak, G.J.3
Edgell, M.H.4
-
26
-
-
0029620316
-
Modeling unfolded states of peptides and proteins
-
Creamer TP, Srinivasan R, Rose GD. Modeling unfolded states of peptides and proteins. Biochemistry 1995;34:16245-16250.
-
(1995)
Biochemistry
, vol.34
, pp. 16245-16250
-
-
Creamer, T.P.1
Srinivasan, R.2
Rose, G.D.3
-
27
-
-
0033608974
-
Interaction between water and polar groups of the helix backbone: An important determinant of helix propensities
-
Luo P, Baldwin RL. Interaction between water and polar groups of the helix backbone: an important determinant of helix propensities. Proc Natl Acad Sci USA 1999;96:4930-4935.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 4930-4935
-
-
Luo, P.1
Baldwin, R.L.2
-
28
-
-
0036805481
-
Intramolecular interactions at protein surfaces and their impact on protein function
-
Robertson AD. Intramolecular interactions at protein surfaces and their impact on protein function. Trends Biochem Sci 2002;27:521-526.
-
(2002)
Trends Biochem Sci
, vol.27
, pp. 521-526
-
-
Robertson, A.D.1
|