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Volumn 6, Issue 1, 2005, Pages 36-45

The phenogenetic logic of life

Author keywords

[No Author keywords available]

Indexed keywords

LIPOPROTEIN; TRANSCRIPTION FACTOR PAX6;

EID: 10644291744     PISSN: 14710056     EISSN: None     Source Type: Journal    
DOI: 10.1038/nrg1502     Document Type: Review
Times cited : (54)

References (55)
  • 5
    • 0030048999 scopus 로고    scopus 로고
    • Resynthesizing evolutionary and developmental biology
    • Gilbert, S., Opitz, J. & Raff, R. Resynthesizing evolutionary and developmental biology. Dev. Biol. 173, 357-372 (1996).
    • (1996) Dev. Biol. , vol.173 , pp. 357-372
    • Gilbert, S.1    Opitz, J.2    Raff, R.3
  • 6
    • 0004210529 scopus 로고    scopus 로고
    • Sinauer, Sunderland, Massachusetts
    • Gilbert, S. Developmental Biology (Sinauer, Sunderland, Massachusetts, 2003). This classic is an excellent, up-to-date treatment of animal development, with insightful consideration of the historic origins of the field and the recent advances in the genetics, as well as the diversity of experiments that demonstrate key processes in the generation of complex form.
    • (2003) Developmental Biology
    • Gilbert, S.1
  • 9
    • 0003851228 scopus 로고    scopus 로고
    • Blackwell Science, Malden, Massachusetts
    • Carroll, S., Grenier, J. & Weatherbee, S. From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design (Blackwell Science, Malden, Massachusetts, 2004). A visually compelling and conceptually clear statement of the role of cis-regulation in the nature and evolution of complex traits. This book reflects Carroll's exemplary experimental abilities to show the power of regulatory mechanisms.
    • (2004) From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design
    • Carroll, S.1    Grenier, J.2    Weatherbee, S.3
  • 10
    • 0004000709 scopus 로고    scopus 로고
    • Academic Press, San Diego, California
    • Davidson, E. H. Genomic Regulatory Systems: Development and Evolution (Academic Press, San Diego, California, 2001). A detailed presentation of the complex regulatory networks that are involved in the production of complex traits, demonstrating in detail how regulatory elements work and evolve. A new edition is forthcoming.
    • (2001) Genomic Regulatory Systems: Development and Evolution
    • Davidson, E.H.1
  • 11
    • 3042697890 scopus 로고    scopus 로고
    • Wiley-Liss, New York
    • Weiss, K. M. & Buchanan, A. V. Genetics and the Logic of Evolution (Wiley-Liss, New York, 2004). This is a systematic book-length treatment, with supporting details and references, of the synthesis that is attempted in the current article. The authors relate these principles to the underlying genes and their evolution, attempting to create an integrated view of evolution and development that includes a deeper consideration of the role of chance in evolution.
    • (2004) Genetics and the Logic of Evolution
    • Weiss, K.M.1    Buchanan, A.V.2
  • 14
  • 15
    • 10644272391 scopus 로고    scopus 로고
    • Prentice Hall, Upper Saddle River, New Jersey
    • Lewin, B. Genes VIII (Prentice Hall, Upper Saddle River, New Jersey, 2004).
    • (2004) Genes VIII
    • Lewin, B.1
  • 16
    • 0035895505 scopus 로고    scopus 로고
    • The sequence of the human genome
    • Venter, J. C. et al. The sequence of the human genome. Science 291, 1304-1351 (2001).
    • (2001) Science , vol.291 , pp. 1304-1351
    • Venter, J.C.1
  • 18
    • 0030986495 scopus 로고    scopus 로고
    • Evolutionary origins and maintenance of redundant gene expression during metazoan development
    • Cooke, J., Nowak, M. A., Boerlijst, M. & Maynard-Smith, J. Evolutionary origins and maintenance of redundant gene expression during metazoan development. Trends Genet. 13, 360-364 (1997).
    • (1997) Trends Genet. , vol.13 , pp. 360-364
    • Cooke, J.1    Nowak, M.A.2    Boerlijst, M.3    Maynard-Smith, J.4
  • 19
    • 0034731009 scopus 로고    scopus 로고
    • Mechanisms of molecular evolution
    • Ohta, T. Mechanisms of molecular evolution. Phil. Trans. R. Soc. Lond. B 355, 1623-1626 (2000).
    • (2000) Phil. Trans. R. Soc. Lond. B , vol.355 , pp. 1623-1626
    • Ohta, T.1
  • 20
    • 0038306149 scopus 로고    scopus 로고
    • Evolution by gene duplication revisited: Differentiation of regulatory elements versus proteins
    • Ohta, T. Evolution by gene duplication revisited: differentiation of regulatory elements versus proteins. Genetica 118, 209-216 (2003).
    • (2003) Genetica , vol.118 , pp. 209-216
    • Ohta, T.1
  • 21
    • 0035542971 scopus 로고    scopus 로고
    • Modularity in vertebrate brain development and evolution
    • Redies, C. & Puelles, L. Modularity in vertebrate brain development and evolution, Bioessays 23, 1100-1111 (2001).
    • (2001) Bioessays , vol.23 , pp. 1100-1111
    • Redies, C.1    Puelles, L.2
  • 22
    • 0032052216 scopus 로고    scopus 로고
    • Hemoglobins from bacteria to man: Evolution of different patterns of gene expression
    • Hardison, R. Hemoglobins from bacteria to man: evolution of different patterns of gene expression. J. Exp. Biol. 201, 1099-1117 (1998).
    • (1998) J. Exp. Biol. , vol.201 , pp. 1099-1117
    • Hardison, R.1
  • 23
    • 3843056697 scopus 로고    scopus 로고
    • Genetic basis for the evolution of vertebrate mineralized tissue
    • Kawasaki, K., Suzuki, T. & Weiss, K. M. Genetic basis for the evolution of vertebrate mineralized tissue. Proc. Natl Acad. Sci. USA 101, 11356-11361 (2004).
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 11356-11361
    • Kawasaki, K.1    Suzuki, T.2    Weiss, K.M.3
  • 25
    • 1342306698 scopus 로고    scopus 로고
    • Odorant receptor gene choice in olfactory sensory neurons: The one receptor-one neuron hypothesis revisited
    • Mombaerts, P. Odorant receptor gene choice in olfactory sensory neurons: the one receptor-one neuron hypothesis revisited. Curr. Opin. Neurobiol. 14, 31-36 (2004).
    • (2004) Curr. Opin. Neurobiol. , vol.14 , pp. 31-36
    • Mombaerts, P.1
  • 26
    • 0036138294 scopus 로고    scopus 로고
    • Odorant receptor gene regulation: Implications from genomic organization
    • Kratz, E., Dugas, J. C. & Ngai, J. Odorant receptor gene regulation: implications from genomic organization. Trends Genet. 18, 29-34 (2002).
    • (2002) Trends Genet. , vol.18 , pp. 29-34
    • Kratz, E.1    Dugas, J.C.2    Ngai, J.3
  • 27
    • 0035855833 scopus 로고    scopus 로고
    • How the olfactory system makes sense of scents
    • Firestein, S. How the olfactory system makes sense of scents. Nature 413, 211-218 (2001).
    • (2001) Nature , vol.413 , pp. 211-218
    • Firestein, S.1
  • 29
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: Understanding fhe cell's functional organization
    • Barabasi, A. L. & Oltvai, Z. N. Network biology: understanding fhe cell's functional organization. Nature Rev. Genet. 5, 101-113 (2004).
    • (2004) Nature Rev. Genet. , vol.5 , pp. 101-113
    • Barabasi, A.L.1    Oltvai, Z.N.2
  • 30
    • 0036855185 scopus 로고    scopus 로고
    • Abundant raw material for cis-regulafory evolution in humans
    • Rockman, M. V. & Wray, G. A. Abundant raw material for cis-regulafory evolution in humans. Mol. Biol. Evol. 19, 1991-2004 (2002).
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1991-2004
    • Rockman, M.V.1    Wray, G.A.2
  • 31
    • 1642512326 scopus 로고    scopus 로고
    • Transcriptional regulation and the evolution of development
    • Wray, G. A. Transcriptional regulation and the evolution of development. Int. J. Dev. Biol. 47, 675-684 (2003).
    • (2003) Int. J. Dev. Biol. , vol.47 , pp. 675-684
    • Wray, G.A.1
  • 32
    • 0042697343 scopus 로고    scopus 로고
    • The evolution of transcriptional regulation in eukaryotes
    • Wray, G. A. et al. The evolution of transcriptional regulation in eukaryotes. Mol. Biol. Evol. 20, 1377-1419 (2003). A rigorous survey of the evolution of short regulatory sequences, tying together classical molecular and phenotypic evolution, that notes the similarities and differences in the way that Darwinian evolution affects regulatory and protein-coding regions.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 1377-1419
    • Wray, G.A.1
  • 33
    • 0035066553 scopus 로고    scopus 로고
    • Organizer and axes formation as & self-organizing process
    • Meinhardt, H. Organizer and axes formation as & self-organizing process. Int. J. Dev. Biol. 45, 177-188 (2001).
    • (2001) Int. J. Dev. Biol. , vol.45 , pp. 177-188
    • Meinhardt, H.1
  • 34
    • 0033998420 scopus 로고    scopus 로고
    • Reiterative signaling and patterning during mammalian tooth morphogenesis
    • Jernvall, J. & Thesleff, I. Reiterative signaling and patterning during mammalian tooth morphogenesis. Mech. Dev. 92, 19-29 (2000).
    • (2000) Mech. Dev. , vol.92 , pp. 19-29
    • Jernvall, J.1    Thesleff, I.2
  • 35
    • 0000093272 scopus 로고    scopus 로고
    • Genotype, phenotype, and developmental biology of molar tooth characters
    • Jernvall, J. & Jung, H. S. Genotype, phenotype, and developmental biology of molar tooth characters. Am. J. Phys. Anthropol. 31, S171-S190 (2000).
    • (2000) Am. J. Phys. Anthropol. , vol.31
    • Jernvall, J.1    Jung, H.S.2
  • 37
    • 0033593404 scopus 로고    scopus 로고
    • Morphogenesis
    • Hogan, B. L. Morphogenesis. Cell 96, 225-233 (1999).
    • (1999) Cell , vol.96 , pp. 225-233
    • Hogan, B.L.1
  • 38
    • 0030248501 scopus 로고    scopus 로고
    • One hundred years of positional information
    • Wolpert, L. One hundred years of positional information. Trends Genet 12, 359-364 (1996).
    • (1996) Trends Genet , vol.12 , pp. 359-364
    • Wolpert, L.1
  • 40
    • 0036405105 scopus 로고    scopus 로고
    • Good vibrations: The silent symphony of life
    • Weiss, K. M. Good vibrations: the silent symphony of life. Evol. Anthropol. 11, 176-182 (2002).
    • (2002) Evol. Anthropol. , vol.11 , pp. 176-182
    • Weiss, K.M.1
  • 41
    • 0029940496 scopus 로고    scopus 로고
    • Models of biological pattern formation: Common mechanism in plant and animal-development
    • Meinhardt, H. Models of biological pattern formation: common mechanism in plant and animal-development. Int. J. Dev. Biol. 40, 123-134 (1996).
    • (1996) Int. J. Dev. Biol. , vol.40 , pp. 123-134
    • Meinhardt, H.1
  • 42
    • 0032321433 scopus 로고    scopus 로고
    • Dynamic interactions and the evolutionary genetics of dental patterning
    • Weiss, K. M., Stock, D. W. & Zhao, Z. Dynamic interactions and the evolutionary genetics of dental patterning. Crit. Rev. Oral Biol. Med. 9, 369-398 (1998).
    • (1998) Crit. Rev. Oral Biol. Med. , vol.9 , pp. 369-398
    • Weiss, K.M.1    Stock, D.W.2    Zhao, Z.3
  • 43
    • 0003475470 scopus 로고    scopus 로고
    • Springer, Berlin
    • Murray, J. Mathematical Biology (Springer, Berlin, 2002). This is an excellent formal treatment of the mathematical structure of repetitive-pattering (and other) mechanisms, many of which have subsequently been confirmed in broad outline in various organisms.
    • (2002) Mathematical Biology
    • Murray, J.1
  • 45
    • 0004156706 scopus 로고    scopus 로고
    • Springer, Heidelberg
    • Meinhardt, H. The Algorithmic Beauty of Sea Shells (Springer, Heidelberg, 2003). A beautiful, metaphorical, but also formalized demonstration of the phenotypic flexibility that can be achieved by simple patterning processes. The book includes a working programme so that readers can generate these kinds of patterns themselves.
    • (2003) The Algorithmic Beauty of Sea Shells
    • Meinhardt, H.1
  • 46
    • 0029163545 scopus 로고
    • A reaction-diffusion wave on the marine angelfish Pomocanthus
    • Kondo, S. & Asai, R. A reaction-diffusion wave on the marine angelfish Pomocanthus. Nature 376, 765-768 (1995).
    • (1995) Nature , vol.376 , pp. 765-768
    • Kondo, S.1    Asai, R.2
  • 47
    • 0037103388 scopus 로고    scopus 로고
    • Pentadactyl ground state of the avian wing
    • Larsson, H. C. & Wagner, G. P. Pentadactyl ground state of the avian wing. J. Exp. Zool. 294, 146-151 (2002).
    • (2002) J. Exp. Zool. , vol.294 , pp. 146-151
    • Larsson, H.C.1    Wagner, G.P.2
  • 48
    • 0040288532 scopus 로고    scopus 로고
    • A research programme for testing the biological homology concept
    • discussion 134-140
    • Wagner, G. P. A research programme for testing the biological homology concept. Novartis Found. Symp. 222, 125-134; discussion 134-140 (1999).
    • (1999) Novartis Found. Symp. , vol.222 , pp. 125-134
    • Wagner, G.P.1
  • 49
    • 0033609122 scopus 로고    scopus 로고
    • 1,2,3 = 2,3,4: A solution to the problem of the homology of the digits in the avian hand
    • Wagner, G. P. & Gauthier, J. A. 1,2,3 = 2,3,4: a solution to the problem of the homology of the digits in the avian hand. Proc. Natl Acad. Sci. USA 96, 5111-5116 (1999).
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 5111-5116
    • Wagner, G.P.1    Gauthier, J.A.2
  • 51
    • 3042700812 scopus 로고    scopus 로고
    • The smallest, grain in the balance
    • Weiss, K. M. The smallest, grain in the balance. Evol. Anthropol. 13, 122-126 (2004). This and the other Evolutionary Anthropology citations are installments of a regular column that examines conceptual aspects of evolution and genetics. This specific reference deals with Darwinian determinism and alternative views that are based on population-genetic considerations.
    • (2004) Evol. Anthropol. , vol.13 , pp. 122-126
    • Weiss, K.M.1
  • 52
    • 0035931911 scopus 로고    scopus 로고
    • Chance and necessity: The evolution of morphological complexity and diversity
    • Carroll, S. Chance and necessity: the evolution of morphological complexity and diversity. Nature 409, 1102-1109 (2001).
    • (2001) Nature , vol.409 , pp. 1102-1109
    • Carroll, S.1
  • 55
    • 10644263333 scopus 로고
    • (ed. Kristensen, N. P.) (Walter de Gruyter Publishing, Berlin
    • Thenius, E. in Handbook of Zoology (ed. Kristensen, N. P.) (Walter de Gruyter Publishing, Berlin, 1989).
    • (1989) Handbook of Zoology
    • Thenius, E.1


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