메뉴 건너뛰기




Volumn 51, Issue 1, 2004, Pages 87-97

Long-term effects of crop management on Rhizobium leguminosarum biovar viciae populations

Author keywords

Crop management; Diversity; Maize; Rhizobium leguminosarum; Wheat

Indexed keywords

RIBOSOME DNA; SPACER DNA;

EID: 10644288729     PISSN: 01686496     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsec.2004.07.009     Document Type: Article
Times cited : (59)

References (42)
  • 2
    • 0034964968 scopus 로고    scopus 로고
    • The diversity of Archaea and bacteria in association with the roots of Zea mays L
    • M.K. Chelius, and E.W. Triplett The diversity of Archaea and bacteria in association with the roots of Zea mays L Microb. Ecol. 41 2001 252 263
    • (2001) Microb. Ecol. , vol.41 , pp. 252-263
    • Chelius, M.K.1    Triplett, E.W.2
  • 3
    • 0036417910 scopus 로고    scopus 로고
    • The influence of the symbiotic plasmid pRL1JI on the distribution of GM rhizobia in soil and crop rhizospheres, and implications for gene flow
    • I.M. Clark, T.A. Mendum, and P.R. Hirsch The influence of the symbiotic plasmid pRL1JI on the distribution of GM rhizobia in soil and crop rhizospheres, and implications for gene flow Antonie Van Leeuwenhoek 81 2002 607 616
    • (2002) Antonie Van Leeuwenhoek , vol.81 , pp. 607-616
    • Clark, I.M.1    Mendum, T.A.2    Hirsch, P.R.3
  • 4
    • 0034842984 scopus 로고    scopus 로고
    • Effects of inoculation with Rhizobium leguminosarum biovar trifolii on wheat cultivated in clover crop rotation agricultural soil in Morocco
    • A. Hilali, D. Prevost, W.J. Broughton, and H. Antoun Effects of inoculation with Rhizobium leguminosarum biovar trifolii on wheat cultivated in clover crop rotation agricultural soil in Morocco Can. J. Microbiol. 47 2001 590 593
    • (2001) Can. J. Microbiol. , vol.47 , pp. 590-593
    • Hilali, A.1    Prevost, D.2    Broughton, W.J.3    Antoun, H.4
  • 5
    • 0035431143 scopus 로고    scopus 로고
    • Effect of primers hybridizing to different evolutionarily conserved regions of the small-subunit rRNA gene in PCR-based microbial community analyses and genetic profiling
    • A. Schmalenberger, F. Schwieger, and C.C. Tebbe Effect of primers hybridizing to different evolutionarily conserved regions of the small-subunit rRNA gene in PCR-based microbial community analyses and genetic profiling Appl. Environ. Microbiol. 67 2001 3557 3563
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 3557-3563
    • Schmalenberger, A.1    Schwieger, F.2    Tebbe, C.C.3
  • 6
    • 0037241118 scopus 로고    scopus 로고
    • Bacterial diversity in maize rhizospheres: Conclusions on the use of genetic profiles based on PCR-amplified partial small subunit rRNA genes in ecological studies
    • A. Schmalenberger, and C.C. Tebbe Bacterial diversity in maize rhizospheres: conclusions on the use of genetic profiles based on PCR-amplified partial small subunit rRNA genes in ecological studies Mol. Ecol. 12 2003 251 262
    • (2003) Mol. Ecol. , vol.12 , pp. 251-262
    • Schmalenberger, A.1    Tebbe, C.C.2
  • 7
    • 0000988028 scopus 로고    scopus 로고
    • Rhizobia in the field
    • N. Amarger Rhizobia in the field Adv. Agron. 73 2001 109 167
    • (2001) Adv. Agron. , vol.73 , pp. 109-167
    • Amarger, N.1
  • 9
    • 0036330273 scopus 로고    scopus 로고
    • The diversity of Phaseolus-nodulating rhizobial populations is altered by liming of acid soils planted with Phaseolus vulgaris L. in Brazil
    • D.S. Andrade, P.J. Murphy, and K.E. Giller The diversity of Phaseolus-nodulating rhizobial populations is altered by liming of acid soils planted with Phaseolus vulgaris L. in Brazil Appl. Environ. Microbiol. 68 2002 4025 4034
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 4025-4034
    • Andrade, D.S.1    Murphy, P.J.2    Giller, K.E.3
  • 10
    • 0032955239 scopus 로고    scopus 로고
    • Soil fertilization limits the genetic diversity of Rhizobium in bean nodules
    • J. Caballero-Mellado, and E. Martinez-Romero Soil fertilization limits the genetic diversity of Rhizobium in bean nodules Symbiosis 26 1999 111 121
    • (1999) Symbiosis , vol.26 , pp. 111-121
    • Caballero-Mellado, J.1    Martinez-Romero, E.2
  • 11
    • 0034121618 scopus 로고    scopus 로고
    • Higher diversity of Rhizobium leguminosarum biovar viciae populations in arable soils than in grass soils
    • K.M. Palmer, and J.P.W. Young Higher diversity of Rhizobium leguminosarum biovar viciae populations in arable soils than in grass soils Appl. Environ. Microbiol. 66 2000 2445 2450
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2445-2450
    • Palmer, K.M.1    Young, J.P.W.2
  • 12
    • 0001360786 scopus 로고    scopus 로고
    • Ethnomicrobiology: Do agricultural practices modify the population structure of the nitrogen fixing bacteria Rhizobium etli biovar phaseoli?
    • V.B.J. Souza, C. Silva, V. Bouchet, A. Valera, E. Marquez, and L.E. Eguiarte Ethnomicrobiology: do agricultural practices modify the population structure of the nitrogen fixing bacteria Rhizobium etli biovar phaseoli? J. Ethnobiol. 172 1997 249 266
    • (1997) J. Ethnobiol. , vol.172 , pp. 249-266
    • Souza, V.B.J.1    Silva, C.2    Bouchet, V.3    Valera, A.4    Marquez, E.5    Eguiarte, L.E.6
  • 13
    • 0032711275 scopus 로고    scopus 로고
    • Soil type and maize cultivar affect the genetic diversity of maize root-associated Burkholderia cepacia populations
    • C. Dalmastri, L. Chiarini, C. Cantale, A. Bevivino, and S. Tabacchioni Soil type and maize cultivar affect the genetic diversity of maize root-associated Burkholderia cepacia populations Microb. Ecol. 38 1999 273 284
    • (1999) Microb. Ecol. , vol.38 , pp. 273-284
    • Dalmastri, C.1    Chiarini, L.2    Cantale, C.3    Bevivino, A.4    Tabacchioni, S.5
  • 15
    • 0037392961 scopus 로고    scopus 로고
    • Compatibility of rhizobial genotypes within natural populations of Rhizobium leguminosarum biovar viciae for nodulation of host legumes
    • G. Laguerre, P. Louvrier, M.R. Allard, and N. Amarger Compatibility of rhizobial genotypes within natural populations of Rhizobium leguminosarum biovar viciae for nodulation of host legumes Appl. Environ. Microbiol. 69 2003 2276 2283
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2276-2283
    • Laguerre, G.1    Louvrier, P.2    Allard, M.R.3    Amarger, N.4
  • 16
    • 0029960564 scopus 로고    scopus 로고
    • The composition of fluorescent pseudomonad populations associated with roots is influenced by plant and soil type
    • X. Latour, T. Corberand, G. Laguerre, F. Allard, and P. Lemanceau The composition of fluorescent pseudomonad populations associated with roots is influenced by plant and soil type Appl. Environ. Microbiol. 62 1996 2449 2456
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2449-2456
    • Latour, X.1    Corberand, T.2    Laguerre, G.3    Allard, F.4    Lemanceau, P.5
  • 17
    • 0026616612 scopus 로고
    • Genetic and phenotypic diversity of Bacillus polymyxa in soil and in the wheat rhizosphere
    • P. Mavingui, G. Laguerre, O. Berge, and T. Heulin Genetic and phenotypic diversity of Bacillus polymyxa in soil and in the wheat rhizosphere Appl. Environ. Microbiol. 58 1992 1894 1903
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 1894-1903
    • Mavingui, P.1    Laguerre, G.2    Berge, O.3    Heulin, T.4
  • 18
    • 0027045527 scopus 로고
    • A review: Long-term effects of agricultural systems on soil biological and microbial parameters
    • R. Dick A review: long-term effects of agricultural systems on soil biological and microbial parameters Agric. Ecosyst. Environ. 40 1992 25 36
    • (1992) Agric. Ecosyst. Environ. , vol.40 , pp. 25-36
    • Dick, R.1
  • 19
    • 84862483971 scopus 로고
    • Influence d'enfouissements répétés de tiges de maïs sur la microflore bactérienne des sols
    • J. Rivière, Y. Frouard, and G. Catroux Influence d'enfouissements répétés de tiges de maïs sur la microflore bactérienne des sols Ann. Agron. 21 1970 403 420
    • (1970) Ann. Agron. , vol.21 , pp. 403-420
    • Rivière, J.1    Frouard, Y.2    Catroux, G.3
  • 20
    • 0000766597 scopus 로고
    • Soil microbiological and biochemical effects of long-term atrazine applications
    • J.P. Voets, P. Meerschman, and W. Verstraete Soil microbiological and biochemical effects of long-term atrazine applications Soil Biol. Biochem. 6 1974 149 152
    • (1974) Soil Biol. Biochem. , vol.6 , pp. 149-152
    • Voets, J.P.1    Meerschman, P.2    Verstraete, W.3
  • 21
    • 0029891660 scopus 로고    scopus 로고
    • Typing of rhizobia by PCR DNA fingerprinting and PCR-restriction fragment length polymorphism analysis of chromosomal and symbiotic gene regions: Application to Rhizobium leguminosarum and its different biovars
    • G. Laguerre, P. Mavingui, M.R. Allard, M.P. Charnay, P. Louvrier, S.I. Mazurier, L. Rigottier-Gois, and N. Amarger Typing of rhizobia by PCR DNA fingerprinting and PCR-restriction fragment length polymorphism analysis of chromosomal and symbiotic gene regions: application to Rhizobium leguminosarum and its different biovars Appl. Environ. Microbiol. 62 1996 2029 2036
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2029-2036
    • Laguerre, G.1    Mavingui, P.2    Allard, M.R.3    Charnay, M.P.4    Louvrier, P.5    Mazurier, S.I.6    Rigottier-Gois, L.7    Amarger, N.8
  • 22
    • 0029802392 scopus 로고    scopus 로고
    • Distribution of symbiotic genotypes in Rhizobium leguminosarum biovar viciae populations isolated directly from soils
    • P. Louvrier, G. Laguerre, and N. Amarger Distribution of symbiotic genotypes in Rhizobium leguminosarum biovar viciae populations isolated directly from soils Appl. Environ. Microbiol. 62 1996 4202 4205
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 4202-4205
    • Louvrier, P.1    Laguerre, G.2    Amarger, N.3
  • 24
    • 0029141581 scopus 로고
    • Semiselective medium for isolation of Rhizobium leguminosarum from soils
    • P. Louvrier, G. Laguerre, and N. Amarger Semiselective medium for isolation of Rhizobium leguminosarum from soils Soil. Biol. Biochem. 27 1995 919 924
    • (1995) Soil. Biol. Biochem. , vol.27 , pp. 919-924
    • Louvrier, P.1    Laguerre, G.2    Amarger, N.3
  • 25
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • L. Excoffier, P.E. Smouse, and J.M. Quattro Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data Genetics 131 1992 479 491
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 26
    • 0000006498 scopus 로고
    • Diversity and evenness: A unifying notation and its consequences
    • M.O. Hill Diversity and evenness: a unifying notation and its consequences Ecology 54 1973 427 432
    • (1973) Ecology , vol.54 , pp. 427-432
    • Hill, M.O.1
  • 27
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 28
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • J. Brosius, T.J. Dull, D.D. Sleeter, and H.F. Noller Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli J. Mol. Biol. 148 1981 107 127
    • (1981) J. Mol. Biol. , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 30
    • 0042709557 scopus 로고    scopus 로고
    • Predominant Bacillus spp. in agricultural soil under different management regimes detected via PCR-DGGE
    • P. Garbeva, J.A. van Veen, and J.D. van Elsas Predominant Bacillus spp. in agricultural soil under different management regimes detected via PCR-DGGE Microb. Ecol. 45 2003 302 316
    • (2003) Microb. Ecol. , vol.45 , pp. 302-316
    • Garbeva, P.1    Van Veen, J.A.2    Van Elsas, J.D.3
  • 31
    • 0036023978 scopus 로고    scopus 로고
    • Effects of agronomical measures on the microbial diversity of soils as related to the suppression of soil-borne plant pathogens
    • D. van Elsas, P. Garbeva, and J. Salles Effects of agronomical measures on the microbial diversity of soils as related to the suppression of soil-borne plant pathogens Biodegradation 13 2002 29 40
    • (2002) Biodegradation , vol.13 , pp. 29-40
    • Van Elsas, D.1    Garbeva, P.2    Salles, J.3
  • 32
    • 0343550310 scopus 로고    scopus 로고
    • Impact of crop management on intraspecific diversity of Pseudomonas corrugata in bulk soil
    • W. Achouak, J.M. Thiery, P. Roubaud, and T. Heulin Impact of crop management on intraspecific diversity of Pseudomonas corrugata in bulk soil FEMS Microbiol. Ecol. 31 2000 11 19
    • (2000) FEMS Microbiol. Ecol. , vol.31 , pp. 11-19
    • Achouak, W.1    Thiery, J.M.2    Roubaud, P.3    Heulin, T.4
  • 33
    • 0032213991 scopus 로고    scopus 로고
    • Soil microbial diversity and community structure under wheat as influenced by tillage and crop rotation
    • N.Z. Lupwayi, W.A. Rice, and G.W. Clayton Soil microbial diversity and community structure under wheat as influenced by tillage and crop rotation Soil Biol. Biochem. 30 1998 1733 1741
    • (1998) Soil Biol. Biochem. , vol.30 , pp. 1733-1741
    • Lupwayi, N.Z.1    Rice, W.A.2    Clayton, G.W.3
  • 34
    • 0029659523 scopus 로고    scopus 로고
    • Root colonization of maize and lettuce by bioluminescent Rhizobium leguminosarum biovar phaseoli
    • R. Chabot, H. Antoun, J.W. Kloepper, and C.J. Beauchamp Root colonization of maize and lettuce by bioluminescent Rhizobium leguminosarum biovar phaseoli Appl. Environ. Microbiol. 62 1996 2767 2772
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2767-2772
    • Chabot, R.1    Antoun, H.2    Kloepper, J.W.3    Beauchamp, C.J.4
  • 35
    • 0029110952 scopus 로고
    • Survival of plant growth promoting rhizosphere bacteria in the rhizosphere of different crops and migration to non-inoculated plants under field conditions in north-east Germany
    • W. Wiehe, and G. Höflich Survival of plant growth promoting rhizosphere bacteria in the rhizosphere of different crops and migration to non-inoculated plants under field conditions in north-east Germany Microbiol. Res. 150 1995 201 206
    • (1995) Microbiol. Res. , vol.150 , pp. 201-206
    • Wiehe, W.1    Höflich, G.2
  • 36
    • 0242317248 scopus 로고    scopus 로고
    • Effect of long-term herbicide applications on the bacterial community structure and function in an agricultural soil
    • D. Seghers, K. Verthe, D. Reheul, R. Bulcke, S.D. Siciliano, W. Verstraete, and E.M. Top Effect of long-term herbicide applications on the bacterial community structure and function in an agricultural soil FEMS Microbiol. Ecol. 46 2003 139 146
    • (2003) FEMS Microbiol. Ecol. , vol.46 , pp. 139-146
    • Seghers, D.1    Verthe, K.2    Reheul, D.3    Bulcke, R.4    Siciliano, S.D.5    Verstraete, W.6    Top, E.M.7
  • 37
    • 0030251156 scopus 로고    scopus 로고
    • Rapid mineralization of the S-triazine ring of atrazine in soils in relation to soil management
    • E. Barriuso, and S. Houot Rapid mineralization of the S-triazine ring of atrazine in soils in relation to soil management Soil Biol. Biochem. 28 1996 1341 1348
    • (1996) Soil Biol. Biochem. , vol.28 , pp. 1341-1348
    • Barriuso, E.1    Houot, S.2
  • 40
    • 0033775230 scopus 로고    scopus 로고
    • Substrate specificity of atrazine chlorohydrolase and atrazine-catabolizing bacteria
    • J.L. Seffernick, G. Johnson, M.J. Sadowsky, and L.P. Wackett Substrate specificity of atrazine chlorohydrolase and atrazine-catabolizing bacteria Appl. Environ. Microbiol. 66 2000 4247 4252
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4247-4252
    • Seffernick, J.L.1    Johnson, G.2    Sadowsky, M.J.3    Wackett, L.P.4
  • 41
    • 0033931985 scopus 로고    scopus 로고
    • Characterization of an atrazine-degrading Pseudaminobacter sp. isolated from Canadian and French agricultural soils
    • E. Topp, H. Zhu, S.M. Nour, S. Houot, M. Lewis, and D. Cuppels Characterization of an atrazine-degrading Pseudaminobacter sp. isolated from Canadian and French agricultural soils Appl. Environ. Microbiol. 66 2000 2773 2782
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2773-2782
    • Topp, E.1    Zhu, H.2    Nour, S.M.3    Houot, S.4    Lewis, M.5    Cuppels, D.6
  • 42
    • 76549256965 scopus 로고
    • Estimation of bacterial densities by means of the most probable number
    • W. Cochran Estimation of bacterial densities by means of the most probable number Biometrics 6 1950 105 116
    • (1950) Biometrics , vol.6 , pp. 105-116
    • Cochran, W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.