-
1
-
-
0033580456
-
Monitoring gene expression profile changes in ovarian carcinomas using cDNA microarray
-
K. Wang, L. Gan, E. Jeffery, M. Gayle, A.M. Gown, and M. Skelly Monitoring gene expression profile changes in ovarian carcinomas using cDNA microarray Gene 229 1999 101 108
-
(1999)
Gene
, vol.229
, pp. 101-108
-
-
Wang, K.1
Gan, L.2
Jeffery, E.3
Gayle, M.4
Gown, A.M.5
Skelly, M.6
-
2
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
T.R. Golub, D.K. Slonim, P. Tamayo, C. Huard, M. Gaasenbeek, and J.P. Mesirov Molecular classification of cancer: class discovery and class prediction by gene expression monitoring Science 286 1999 531 537
-
(1999)
Science
, vol.286
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
Mesirov, J.P.6
-
3
-
-
0034090939
-
Making the most of microarray data
-
T. Gaasterland, and S. Bekiranov Making the most of microarray data Nature Genet. 24 2000 204 206
-
(2000)
Nature Genet.
, vol.24
, pp. 204-206
-
-
Gaasterland, T.1
Bekiranov, S.2
-
4
-
-
0033027794
-
Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation
-
P. Tamayo, D. Slonim, J. Mesirov, Q. Zhu, S. Kitareewan, and E. Dmitrovsky Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation Proc. Natl Acad. Sci. 96 1999 2907 2912
-
(1999)
Proc. Natl Acad. Sci.
, vol.96
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zhu, Q.4
Kitareewan, S.5
Dmitrovsky, E.6
-
5
-
-
2942511492
-
Cancer characterization and feature set extraction by discriminative margin clustering
-
K. Munagala, R. Tibshirani, and P.O. Brown Cancer characterization and feature set extraction by discriminative margin clustering BMC Bioinformatics 5 2004 21
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 21
-
-
Munagala, K.1
Tibshirani, R.2
Brown, P.O.3
-
6
-
-
0035432509
-
Expression profiling of human tumors: The end of surgical pathology
-
M. Ladanyi, W.C. Chan, T.J. Triche, and W.L. Gerald Expression profiling of human tumors: the end of surgical pathology J. Mol. Diagnos. 3 2001 92 97
-
(2001)
J. Mol. Diagnos.
, vol.3
, pp. 92-97
-
-
Ladanyi, M.1
Chan, W.C.2
Triche, T.J.3
Gerald, W.L.4
-
7
-
-
0034655160
-
Linking gene expression patterns to therapeutic groups in breast cancer
-
K.J. Martin, B.M. Kritzman, L.M. Price, B. Koh, C.P. Kwan, and X. Zhang Linking gene expression patterns to therapeutic groups in breast cancer Cancer Res. 60 2000 2232 2238
-
(2000)
Cancer Res.
, vol.60
, pp. 2232-2238
-
-
Martin, K.J.1
Kritzman, B.M.2
Price, L.M.3
Koh, B.4
Kwan, C.P.5
Zhang, X.6
-
8
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
A.A. Alizadeh, M.B. Eisen, R.E. Davis, C. Ma, I.S. Lossos, and A. Rosenwald Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling Nature 403 2000 503 511
-
(2000)
Nature
, vol.403
, pp. 503-511
-
-
Alizadeh, A.A.1
Eisen, M.B.2
Davis, R.E.3
Ma, C.4
Lossos, I.S.5
Rosenwald, A.6
-
9
-
-
0037223571
-
Expression profiling in multistage hepatocarcinogenesis: Identification of HSP70 as a molecular marker of early hepatocellular carcinoma
-
M. Chuma, M. Sakamoto, K. Yamazaki, T. Ohta, M. Ohki, and M. Asaka Expression profiling in multistage hepatocarcinogenesis: identification of HSP70 as a molecular marker of early hepatocellular carcinoma Hepatology 37 2003 198 207
-
(2003)
Hepatology
, vol.37
, pp. 198-207
-
-
Chuma, M.1
Sakamoto, M.2
Yamazaki, K.3
Ohta, T.4
Ohki, M.5
Asaka, M.6
-
10
-
-
0037962865
-
Analysis of gene expression profile of pancreatic carcinoma using cDNA microarray
-
Z.J. Tan, X.G. Hu, G.S. Cao, and Y. Tang Analysis of gene expression profile of pancreatic carcinoma using cDNA microarray World J. Gastroenterol. 9 2003 818 823
-
(2003)
World J. Gastroenterol.
, vol.9
, pp. 818-823
-
-
Tan, Z.J.1
Hu, X.G.2
Cao, G.S.3
Tang, Y.4
-
12
-
-
0035845511
-
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
-
T. Sorlie, C.M. Perou, R. Tibshirani, T. Aas, S. Geisler, and H. Johnsen Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications Proc. Natl Acad. Sci. USA 98 2001 10869 10874
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 10869-10874
-
-
Sorlie, T.1
Perou, C.M.2
Tibshirani, R.3
Aas, T.4
Geisler, S.5
Johnsen, H.6
-
13
-
-
0035032570
-
Statistical design and the analysis of gene expression microarray data
-
M.K. Kerr, and G.A. Churchill Statistical design and the analysis of gene expression microarray data Genet. Res. 77 2001 123 128
-
(2001)
Genet. Res.
, vol.77
, pp. 123-128
-
-
Kerr, M.K.1
Churchill, G.A.2
-
14
-
-
0035300437
-
Transcriptional gene expression profiles of colorectal adenoma, adenocarcinoma, and normal tissue examined by oligonucleotide arrays
-
D.A. Notterman, U. Alon, A.J. Sierk, and A.J. Levine Transcriptional gene expression profiles of colorectal adenoma, adenocarcinoma, and normal tissue examined by oligonucleotide arrays Cancer Res. 61 2001 3124 3130
-
(2001)
Cancer Res.
, vol.61
, pp. 3124-3130
-
-
Notterman, D.A.1
Alon, U.2
Sierk, A.J.3
Levine, A.J.4
-
15
-
-
12944257429
-
Genome-wide expression profiling of mid-gestation placenta and embryo using a 15000 mouse developmental Cdna microarray
-
T.S. Tanaka, S.A. Jaradat, M.K. Lim, G.J. Kargul, X. Wang, and M.J. Grahovac Genome-wide expression profiling of mid-gestation placenta and embryo using a 15000 mouse developmental Cdna microarray Proc. Natl Acad. Sci. USA 97 2000 9127 9132
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 9127-9132
-
-
Tanaka, T.S.1
Jaradat, S.A.2
Lim, M.K.3
Kargul, G.J.4
Wang, X.5
Grahovac, M.J.6
-
16
-
-
0036628189
-
Computational selection of distinct class- and subclass-specific gene expression signatures
-
P.R. Bushel, H.K. Hamadeh, L. Bennett, J. Green, A. Ableson, and S. Misener Computational selection of distinct class- and subclass-specific gene expression signatures J. Biomed. Inform. 35 2002 160 170
-
(2002)
J. Biomed. Inform.
, vol.35
, pp. 160-170
-
-
Bushel, P.R.1
Hamadeh, H.K.2
Bennett, L.3
Green, J.4
Ableson, A.5
Misener, S.6
-
17
-
-
0036494361
-
Stanniocalcin 2 is an estrogen-responsive gene coexpressed with the estrogen receptor in human breast cancer
-
T. Bouras, M.C. Southey, A.C. Chang, R.R. Reddel, D. Willhite, and R. Glynne Stanniocalcin 2 is an estrogen-responsive gene coexpressed with the estrogen receptor in human breast cancer Cancer Res. 62 2002 1289 1295
-
(2002)
Cancer Res.
, vol.62
, pp. 1289-1295
-
-
Bouras, T.1
Southey, M.C.2
Chang, A.C.3
Reddel, R.R.4
Willhite, D.5
Glynne, R.6
-
18
-
-
0141986842
-
Analysis of gene expression profiles in human systemic lupus erythematosus using oligonucleotide microarray
-
G.M. Han, S.L. Chen, N. Shen, S. Ye, C.D. Bao, and Y.Y. Gu Analysis of gene expression profiles in human systemic lupus erythematosus using oligonucleotide microarray Genes Immun. 4 2003 177 186
-
(2003)
Genes Immun.
, vol.4
, pp. 177-186
-
-
Han, G.M.1
Chen, S.L.2
Shen, N.3
Ye, S.4
Bao, C.D.5
Gu, Y.Y.6
-
19
-
-
0035420014
-
Prediction of sensitivity of esophageal tumors to adjuvant chemotherapy by cDNA microarray analysis of gene-expression profiles
-
C. Kihara, T. Tsunoda, T. Tanaka, H. Yamana, Y. Furukawa, and K. One Prediction of sensitivity of esophageal tumors to adjuvant chemotherapy by cDNA microarray analysis of gene-expression profiles Cancer Res. 61 2001 6474 6479
-
(2001)
Cancer Res.
, vol.61
, pp. 6474-6479
-
-
Kihara, C.1
Tsunoda, T.2
Tanaka, T.3
Yamana, H.4
Furukawa, Y.5
One, K.6
-
20
-
-
0036201362
-
Expression of cytokine- and chemokine-related genes in peripheral blood mononuclear cells from lupus patients by cDNA array
-
V. Rus, S.P. Atamas, V. Shustova, I.G. Luzina, F. Selaru, and L.S. Magder Expression of cytokine- and chemokine-related genes in peripheral blood mononuclear cells from lupus patients by cDNA array Clin. Immunol. 102 2002 283 290
-
(2002)
Clin. Immunol.
, vol.102
, pp. 283-290
-
-
Rus, V.1
Atamas, S.P.2
Shustova, V.3
Luzina, I.G.4
Selaru, F.5
Magder, L.S.6
-
21
-
-
0035687554
-
Assessing gene significance from cDNA microarray expression data via mixed models
-
R.D. Wolfinger, G. Gibson, E.D. Wolfinger, L. Bennett, H. Hamadeh, and P. Bushel Assessing gene significance from cDNA microarray expression data via mixed models J. Comput. Biol. 8 2001 625 637
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 625-637
-
-
Wolfinger, R.D.1
Gibson, G.2
Wolfinger, E.D.3
Bennett, L.4
Hamadeh, H.5
Bushel, P.6
-
22
-
-
2942623967
-
ArraySolver: An algorithm for colour-coded graphical display and Wilcoxon signed-rank statistics for comparing microarray gene expression data
-
H.A. Khan ArraySolver: an algorithm for colour-coded graphical display and Wilcoxon signed-rank statistics for comparing microarray gene expression data Comp. Func. Genom. 5 2004 39 47
-
(2004)
Comp. Func. Genom.
, vol.5
, pp. 39-47
-
-
Khan, H.A.1
-
23
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
B.M. Bolstad, R.A. Irizarry, M. Astrand, and T.P. Speed A comparison of normalization methods for high density oligonucleotide array data based on variance and bias Bioinformatics 19 2003 185 193
-
(2003)
Bioinformatics
, vol.19
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
Speed, T.P.4
-
24
-
-
0034927555
-
Analysis of variance for gene expression microarray data
-
M.K. Kerr, M. Martin, and G.A. Churchill Analysis of variance for gene expression microarray data J. Comput. Biol. 7 2000 819 837
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 819-837
-
-
Kerr, M.K.1
Martin, M.2
Churchill, G.A.3
-
25
-
-
0347286902
-
Regulation of gene expression in inflammatory bowel disease and correlation with IBD drugs screening by DNA microarrays
-
T.P. Dooley, E.V. Curto, S.P. Reddy, R.L. Davis, G.W. Lambert, and T.W. Wilborn Regulation of gene expression in inflammatory bowel disease and correlation with IBD drugs screening by DNA microarrays Inflamm. Bowel Dis. 10 2004 1 14
-
(2004)
Inflamm. Bowel Dis.
, vol.10
, pp. 1-14
-
-
Dooley, T.P.1
Curto, E.V.2
Reddy, S.P.3
Davis, R.L.4
Lambert, G.W.5
Wilborn, T.W.6
-
26
-
-
0003794238
-
-
SPSS Inc., Chicago, Illinois, USA.
-
SPSS for Windows, SPSS Inc., Chicago, Illinois, USA.
-
SPSS for Windows
-
-
-
27
-
-
0001884644
-
Individual comparisons by ranking methods
-
F. Wilcoxon Individual comparisons by ranking methods Biometric Bull. 1 1945 80 83
-
(1945)
Biometric Bull.
, vol.1
, pp. 80-83
-
-
Wilcoxon, F.1
-
28
-
-
0036339050
-
Transforming growth factor-alpha: A surrogate endpoint biomarker
-
S.W. Beenken, R. Hockett Jr, W. Grizzle, H.L. Weiss, A. Pickens, and M. Perloff Transforming growth factor-alpha: a surrogate endpoint biomarker J. Am. Coll. Surg. 195 2002 149 158
-
(2002)
J. Am. Coll. Surg.
, vol.195
, pp. 149-158
-
-
Beenken, S.W.1
Hockett Jr., R.2
Grizzle, W.3
Weiss, H.L.4
Pickens, A.5
Perloff, M.6
-
29
-
-
0038515369
-
Gene expression of immunologically important factors in blood cells, milk cells and mammary tissue of cows
-
M.W. Pfaffl, S.L. Wittmann, H.H.D. Meyer, and R.M. Bruckmaier Gene expression of immunologically important factors in blood cells, milk cells and mammary tissue of cows J. Dairy Sci. 86 2003 538 545
-
(2003)
J. Dairy Sci.
, vol.86
, pp. 538-545
-
-
Pfaffl, M.W.1
Wittmann, S.L.2
Meyer, H.H.D.3
Bruckmaier, R.M.4
-
30
-
-
0036076142
-
Sequential expression of the neuropeptides substance P and somatostatin in granulomas associated with murine cysticercosis
-
P. Robinson, A.C. White, D.E. Lewis, J. Thornby, E. David, and J. Weinstock Sequential expression of the neuropeptides substance P and somatostatin in granulomas associated with murine cysticercosis Infect. Immun. 70 2002 4534 4538
-
(2002)
Infect. Immun.
, vol.70
, pp. 4534-4538
-
-
Robinson, P.1
White, A.C.2
Lewis, D.E.3
Thornby, J.4
David, E.5
Weinstock, J.6
-
31
-
-
0029113686
-
Changes in estrogen receptor, progesterone receptor, and pS2 expression in tamoxifen-resistant human breast cancer
-
S.R. Johnston, G. Saccani-Jotti, I.E. Smith, J. Salter, J. Newby, and M. Coppen Changes in estrogen receptor, progesterone receptor, and pS2 expression in tamoxifen-resistant human breast cancer Cancer Res. 55 1995 3331 3338
-
(1995)
Cancer Res.
, vol.55
, pp. 3331-3338
-
-
Johnston, S.R.1
Saccani-Jotti, G.2
Smith, I.E.3
Salter, J.4
Newby, J.5
Coppen, M.6
-
32
-
-
0034911875
-
An efficient and robust statistical modeling approach to discover differentially expressed genes using genomic expression profiles
-
J.G. Thomas, J.M. Olson, S.J. Tapscott, and L.P. Zhao An efficient and robust statistical modeling approach to discover differentially expressed genes using genomic expression profiles Genome Res. 11 2001 1227 1236
-
(2001)
Genome Res.
, vol.11
, pp. 1227-1236
-
-
Thomas, J.G.1
Olson, J.M.2
Tapscott, S.J.3
Zhao, L.P.4
-
33
-
-
0036856209
-
Nonparametric methods for identifying differentially expressed genes in microarray data
-
O.G. Troyanskaya, M.E. Garber, P.O. Brown, D. Botstein, and R.B. Altman Nonparametric methods for identifying differentially expressed genes in microarray data Bioinformatics 18 2002 1454 1461
-
(2002)
Bioinformatics
, vol.18
, pp. 1454-1461
-
-
Troyanskaya, O.G.1
Garber, M.E.2
Brown, P.O.3
Botstein, D.4
Altman, R.B.5
|