Transcription Through the Nucleosome by mRNA-Producing RNA Polymerases

Methods in Enzymology

Volumn 377, Issue , 2003, Pages 445-460

  Walter, W ^a   Kashlev, M ^b   Studitsky, V M ^a,c  

^a WAYNE STATE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b NATIONAL CANCER INSTITUTE   (United States)

^c RUTGERS ROBERT WOOD JOHNSON MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; HISTONE; MESSENGER RNA; RNA POLYMERASE;

AMINO ACID SEQUENCE; AQUEOUS SOLUTION; ARTICLE; BACTERIOPHAGE T7; CONTROLLED STUDY; DNA TEMPLATE; NONHUMAN; NUCLEOSOME; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN IMMOBILIZATION; PROTEIN PURIFICATION; RNA ANALYSIS; RNA TRANSLATION; SOLID; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION;

EID: 0842304511     PISSN: 00766879     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0076-6879(03)77029-3     Document Type: Article

References (29)

1. D. J. Clark, in "The Nucleus." JAI Press, Greenwich, 1995.
2. G. Orphanides and D. Reinberg, Nature 407, 471 (2000).
3. M. L. Kireeva, W. Walter, V. Tchernajenko, V. Bondarenko, M. Kashlev, and V. M. Studitsky, Mol. Cell 9, 541 (2002).
4. W. Walter, M. Kireeva, V. M. Studitsky, and M. Kashlev, J. Biol. Chem. 278, 36148 (2003).
5. V. M. Studitsky, D. J. Clark, and G. Felsenfeld, Cell 83, 19 (1995).
6. R. U. Protacio, K. J. Polach, and J. Widom, J. Mol. Biol. 274, 708 (1997).
7. J. Bednar, V. M. Studitsky, S. A. Grigoryev, G. Felsenfeld, and C. L. Woodcock, Mol. Cell 4, 377 (1999).
8. D. J. Clark and G. Felsenfeld, Cell 71, 11 (1992).
9. M. F. O'Donohue, I. Duband-Goulet, A. Hamiche, and A. Prunell, Nucleic Acids Res. 22, 937 (1994).
10. V. M. Studitsky, D. J. Clark, and G. Felsenfeld, Cell 76, 371 (1994).
11. V. M. Studitsky, Methods Mol. Biol. 119, 17 (1999).
12. V. M. Studitsky, G. A. Kassavetis, E. P. Geiduschek, and G. Felsenfeld, Science 278, 1960 (1997).
13. M. G. Izban and D. S. Luse, Genes Dev. 5, 683 (1991).
14. R. L. Dedrick and M. J. Chamberlin, Biochemistry 24, 2245 (1985).
15. G. Orphanides, G. LeRoy, C. H. Chang, D. S. Luse, and D. Reinberg, Cell 92, 105 (1998).
16. J. A. Knezetic, G. A. Jacob, and D. S. Luse, Mol. Cell. Biol. 8, 3114 (1988).
17. Y. V. Liu, D. J. Clark, V. Tchernajenko, M. E. Dahmus, and V. M. Studitsky, Biopolymers 68, 528 (2003).
18. I. Sidorenkov, N. Komissarova, and M. Kashlev, Mol. Cell 2, 55 (1998).
19. M. L. Kireeva, N, Komissarova, D. S. Waugh, and M. Kashlev, J. Biol. Chem, 275, 6530 (2000).
20. M. L. Kireeva, N. Komissarova, and M. Kashlev, J. Mol. Biol. 299, 325 (2000).
21. N. Komissarova, M. L. Kireeva, 1. Sidorenkov, and M. Kashlev, Methods Enzymol., in press.
22. J. J. Hayes, D. J. Clark, and A. P. Wolffe, Proc. Natl. Acad. Sci. USA 88, 6829 (1991).
23. W. Walter, M. L. Kireeva, V. Tchernajenko, M. Kashlev, and V. M. Studitsky, Methods Enzymol., in press.
24. G. Meersseman, S. Pennings, and E. M. Bradbury, EMBO J. 11, 2951 (1992).
25. S. Pennings, G. Meersseman, and E. M. Bradbury, Proc. Natl. Acad. Sci. USA 91,10275 (1994).
26. S. Pennings, G. Meersseman, and E. M. Bradbury, J. Mol. Biol. 220, 101 (1991).
27. S. Pennings, G. Meersseman, and E. M. Bradbury, Nucleic Acids Res. 20, 6667 (1992).
28. M. Kashlev, E. Nudler, K. Severinov, S. Borukhov, N. Komissarova, and A. Goldfarb, Methods Enzymol. 274, 326 (1996).
29. J. Ausio, F. Dong, and K. E. van Holde, J. Mol. Biol. 206, 451 (1989).