Structural and functional features of formate hydrogen lyase, an enzyme of mixed-acid fermentation from Escherichia coli

Biochemistry (Moscow)

Volumn 68, Issue 11, 2003, Pages 1159-1170

  Bagramyan, K ^a   Trchounian, A ^a  

^a YEREVAN STATE UNIVERSITY   (Armenia)

Author keywords

Escherichia coli; F0F1 ATPase; Formate dehydrogenase H; Formate hydrogen lyase complex; Hydrogenase 3; Hydrogenase 4; Mixed acid fermentation

Indexed keywords

BIOLOGICAL MEMBRANES; CARBON DIOXIDE; COMPLEXATION; ENZYMES; ESCHERICHIA COLI; FERMENTATION; HYDROGEN; ORGANIC ACIDS; OXIDATION; PH; PROTEINS; PROTONS;

FORMATE DEHYDROGENASE H; FORMATE HYDROGEN LYASE COMPLEX; HYDROGENASE FOUR; HYDROGENASE THREE; MEMBRANE BOUND COMPLEX; MIXED ACID FERMENTATION;

ORGANIC COMPOUNDS;

ESCHERICHIA COLI;

BACTERIAL PROTEIN; FORMATE HYDROGEN LYASE; FORMIC ACID; FORMIC ACID DERIVATIVE; LYASE; PROTEIN SUBUNIT;

CHEMISTRY; ENZYME ACTIVATION; ENZYMOLOGY; ESCHERICHIA COLI; GENETICS; METABOLISM; REVIEW; STRUCTURE ACTIVITY RELATION;

BACTERIAL PROTEINS; ENZYME ACTIVATION; ESCHERICHIA COLI; FORMIC ACIDS; LYASES; PROTEIN SUBUNITS; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 0742286265     PISSN: 00062979     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:BIRY.0000009129.18714.a4     Document Type: Review

References (78)

1. Clark, D. P. (1989) FEMS Microbiol. Lett., 63, 223-224.
2. Riondet, C., Cachon, R., Wache, Y., Alcaraz, G., and Divies, C. (2000) J. Bacteriol., 182, 620-626.
3. Ordal, E. J., and Halvorson, H. O. (1939) J. Bacteriol., 38, 199-220.
4. Adams, M. W., Mortenson, L. E., and Chen, J. S. (1981) Biochim. Biophys. Acta, 594, 105-176.
5. Sawers, G. (1994) Antonie Van Leeuwenhoek, 66, 57-88.
6. Bock, A., and Sawers, G. (1996) in Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, 2nd ed. (Neidhardt, F. C., ed.) ASM Press, Washington DC, pp. 262-282.
7. Adams, M. W., and Stiefel, E. I. (1998) Science, 282, 1842-1843.
8. Nandi, R., and Sengupta, S. (1998) Crit. Rev. Microbiol., 24, 61-84.
9. Casalot, L., and Rousset, M. (2001) Trends Microbiol., 9, 228-237.
10. Peck, H. D., Jr., and Gest, H. (1957) J. Bacteriol., 73, 706-721.
11. Cox, J. C., Edwards, E. S., and DeMoss, J. A. (1981) J. Bacteriol., 145, 1317-1324.
12. Pecher, A., Zinoni, F., and Bock, A. (1985) Arch. Microbiol., 141, 259-363.
13. Zinoni, F., Birkmann, A., Leinfelder, W., and Bock, A. (1987) Proc. Natl. Acad. Sci. USA, 84, 3156-3160.
14. Stadtman, T. C., Davis, J. N., Ching, W.-M., Zinoni, F., and Bock, A. (1991) BioFactors, 3, 21-27.
15. Boyington, J. C., Gladyshev, V. D., Khangulov, S. V., Stadtman, T. C., and Sun, P. D. (1997) Science, 275, 1305-1308.
16. Axley, M. J., Grahame, D. A., and Stadtman, T. C. (1990) J. Biol. Chem., 265, 18213-18218.
17. Axley, M. J., and Grahame, D. A. (1991) J. Biol. Chem., 266, 13731-13736.
18. Sawers, R. G., Ballantine, S. P., and Boxer, D. H. (1985) J. Bacteriol., 164, 1324-1331.
19. Sauter, M., Bohm, R., and Bock, A. (1992) Mol. Microbiol., 6, 1523-1532.
20. Andrews, S. C., Berks, B. C., McClay, J., Ambler, A., Quail, M. A., Golby, P., and Guest, J. R. (1997) 143, 3633-3647.
21. Ballantine, S. P., and Boxer, D. H. (1985) J. Bacteriol., 163, 454-459.
22. Bohm, R., Sauter, M., and Bock, A. (1990) Mol. Microbiol., 4, 231-243.
23. Rossmann, R., Sauter, M., Lottspeich, F., and Bock, A. (1994) Eur. J. Biochem., 220, 377-384.
24. Magalon, A., Blokesh, M., Zehelein, E., and Bock, A. (2001) FEBS Lett., 499, 73-76.
25. Zinoni, F., Beier, A., Pecher, A., Wirth, R., and Bock, A. (1984) Arch. Microbiol., 139, 299-304.
26. Laurinavichene, T. V., and Tsygankov, A. A. (2001) FEMS Microbiol. Lett., 202, 121-124.
27. Ballantine, S. P., and Boxer, D. H. (1986) Eur. J. Biochem., 156, 277-284.
28. Sawers, R. G., Jamieson, D. J., Higgins, S. F., and Boxer, D. H. (1986) J. Bacteriol., 168, 398-404.
29. Wu, L.-F., and Mandrand-Berthelot, M.-A. (1987) Mol. Gen. Genet., 209, 129-134.
30. Rossmann, R., Sawers, G., and Bock, A. (1991) Mol. Microbiol., 5, 2807-2814.
31. Bagramyan, K., Vassilian, A., Mnatsakanyan, N., and Trchounian, A. (2000) Biol. Membr. (Moscow), 17, 604-615.
32. Bagramyan, K., Mnatsakanyan, N., Poladian, A., Vassilian, A., and Trchounian, A. (2002) FEBS Lett., 516, 172-178.
33. Hasona, A., Self, W. T., Ray R. M., and Shanmugam, K. T. (1998) FEMS Microbiol. Lett., 169, 111-116.
34. Lin, E. C. C., and Iuchi, S. (1991) Annu. Rev. Genet., 25, 361-387.
35. Unden, G., and Bongaerts, J. (1997) Biochim. Biophys. Acta, 1320, 217-234.
36. Kobayashi, H. (2000) Recent Res. Devel. Bioenerg., 1, 33-39.
37. Epstein, W., Buurman, E., McLaggan, D., and Naprstek, J. (1993) Biochim. Soc. Transact., 21, 1006-1110.
38. Trchounian, A., and Kobayashi, H. (1999) FEBS Lett., 447, 144-148.
39. Zakharyan, E., and Trchounian, A. (2001) FEMS Microbiol. Lett., 204, 61-64.
40. Trchounian, a., and Kobayashi, H. (2000) Biosci. Rep., 20, 277-288.
41. Nandi, R., Dey, S., and Sengupta, S. (2001) Biotechnol. Bioenerg., 75, 492-494.
42. Barrett, E. L., Kwan, H. S., and Macy, J. (1984) J. Bacteriol., 158, 972-977.
43. Bagramyan, K. A., and Martirosov, S. M. (1989) FEBS Lett., 249, 149-152.
44. Adams, M. W., and Mortenson, L. E. (1984) Biochim. Biophys. Acta, 766, 51-61.
45. Trchounian, A., Bagramyan, K., Vassilian, A., and Mnatsakanyan, N. (1999) Biol. Membr. (Moscow), 16, 416-428.
46. Mnatsakanyan, N., Vassilian, A., Navasardian, L., Bagramyan, K., and Trchounian, A. (2002) Curr. Microbiol., 45, 281-286.
47. Self, W. T., Hasona, A., and Shanmugam, K. T. (2001) Microbiology, 147, 3093-3104.
48. Self, W. T., and Shanmugam, K. T. (2000) FEMS Microbiol. Lett. 184, 47-52.
49. Hopper, S., and Bock, A. (1995) J. Bacteriol., 177, 1798-1803.
50. Schlensog, V., and Bock, A. (1990) Mol. Microbiol., 4, 1319-1327.
51. Hopper, S., Korsa, I., and Bock, A. (1996) J. Bacteriol., 178, 199-203.
52. Lutz, S., Jacobi, A., Schlensog, V., Bohm, R., Sawers, G., and Bock, A. (1991) Mol. Microbiol., 5, 123-135.
53. Jacobi, A., Rossmann, R., and Bock, A (1992) Arch. Microbiol., 158, 444-451.
54. Schlensog, V., Lutz S., and Bock A. (1994) J. Biol. Chem., 269, 19590-19596.
55. Drapal, N., and Bock, A. (1998) Biochemistry, 37, 2941-2948.
56. Magalon, A., and Bock, A. (2000) J. Biol. Chem., 275, 21114-21120.
57. Magalon, A., and Bock, A. (2000) FEBS Lett., 473, 254-258.
58. Rosentel, J. K., Healy, F., Maupin-Farlow, J. A., Lee, J. H., and Shanmugam, K. T. (1995) J. Bacteriol., 177, 4857-4864.
59. Hopper, S., Babst, M., Shlensog, V., Fischer, H.-M., Hennecke, H., and Bock, A. (1994) J. Biol. Chem., 269, 19597-19604.
60. Bagramyan, K. A., and Trchounian, A. A. (1993) Biofizika, 38, 678-683.
61. Bagramyan, K. A., and Trchounian, A. A. (1996) Biofizika, 41, 369-376.
62. Trchounian, A., Bagramyan, K., and Poladian, A. (1997) Curr. Microbiol., 35, 201-206.
63. Hassinen, I. E., and Vuokila, P. T. (1993) Biochim. Biophys. Acta, 1144, 107-123.
64. Martirosov, S. M., and Trchounian, A. A. (1983) Bioelectrochem. Bioenerg., 11, 29-36.
65. Martirosov, S. M., and Trchounian, A. A. (1986) Bioelectrochem. Bioenerg., 15, 417-426.
66. Trchounian, A., Ohanjanian, Y., Bagramyan, K., Vardanyan, V., Zakharyan, E., Vassilian, A., and Davtian, M. (1998) Biosci. Rep., 18, 143-154.
67. Sasahara, K. C., Heinzinger, N. K., and Barrett, E. L. (1997) J. Bacteriol., 179, 6736-6740.
68. Skulachev, V. P. (1989) Energetics of Biological Membranes [in Russian], Nauka, Moskow.
69. Russell, J. B., and Diez-Gonzalez, F. (1998) Adv. Microb. Physiol., 39, 205-234.
70. Trchounian, A. (1997) Usp. Sovr. Biol., 117, 668-689.
71. Mnatsakanyan, N., Zakharyan, E., Bagramyan, K., and Trchounian, A. (2002) Biol. Membr. (Moscow), 19, 182-191.
72. Martirosov, S. M. (1990) J. Theor. Biol., 144, 69-74.
73. Puchkov, E. O., Kosarev, N. V. and Petukhova, N. M. (1982) Biokhimiya, 47, 1522-1525.
74. Kurganov, B. I., and Lyubarev, A. E. (1988) Sov. Sci. Rev.-Phys.-Chem. Biol., 8, 111-147.
75. Albracht, S. P. J., and Hedderich, R. (2000) FEBS Lett., 485, 1-6.
76. Peschek, G. A. (1979) Arch. Microbiol., 123, 81-92.
77. Hartel, U., and Buckel, W. (1996) Arch. Microbiol., 166, 350-356.
78. Steuber, J., Krebs, W., Bott, M., and Dimroth, P. (1999) J. Bacteriol., 181, 241-245.