Backbone dynamics of membrane proteins in lipid bilayers: The effect of two-dimensional array formation as revealed by site-directed solid-state 13C NMR studies on [3-13C]Ala- and [1-13C]Val- labeled bacteriorhodopsin

Biochimica et Biophysica Acta - Biomembranes

Volumn 1616, Issue 2, 2003, Pages 127-136

  Saitô, Hazime ^a   Yamamoto, Kazutoshi ^a   Tuzi, Satoru ^a   Yamaguchi, Satoru ^a  

^a UNIVERSITY OF HYOGO   (Japan)

Author keywords

2D; 2D hexagonal array; Backbone dynamics; Bacterioopsin; Bacteriorhodopsin; bO; bR; CP MAS; Cross polarization magic angle spinning; DD MAS; Membrane protein; Site directed solid state 13C NMR; Two dimensional

Indexed keywords

BACTERIORHODOPSIN; DIMYRISTOYLPHOSPHATIDYLCHOLINE; DIPALMITOYLPHOSPHATIDYLCHOLINE; MEMBRANE PROTEIN; PHOSPHATIDYLCHOLINE; MEMBRANE LIPID;

ALPHA HELIX; ARTICLE; CARBON NUCLEAR MAGNETIC RESONANCE; CONTROLLED STUDY; ENVIRONMENTAL TEMPERATURE; HALOBACTERIUM SALINARUM; LIPID BILAYER; LOW TEMPERATURE; MOLECULAR DYNAMICS; NONHUMAN; PRIORITY JOURNAL; SIGNAL TRANSDUCTION; SOLID STATE; AMINO ACID SEQUENCE; CHEMISTRY; MOLECULAR GENETICS; NUCLEAR MAGNETIC RESONANCE; PROTEIN SECONDARY STRUCTURE; TEMPERATURE;

AMINO ACID SEQUENCE; BACTERIORHODOPSINS; LIPID BILAYERS; MEMBRANE LIPIDS; MOLECULAR SEQUENCE DATA; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEIN STRUCTURE, SECONDARY; TEMPERATURE;

EID: 0642337439     PISSN: 00052736     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbamem.2003.08.002     Document Type: Article

References (54)

1. Bormann B.J., Engelman D.M. Annu. Rev. Biophys. Biomol. Struct. 21:1992;223-242.
2. Sowell M.H.B., Rees D.C. Adv. Protein Chem. 46:1995;279-311.
3. Grigorieff N., Ceska T.A., Dowing K.H., Baldwin J.M., Henderson R. J. Mol. Biol. 259:1996;393-421.
4. Pebay-Peyroula E., Rummel G., Rosenbusch J.P., Landau E.M. Science. 277:1997;1676-1681.
5. Lucke H., Richter H.T., Lanyi J.K. Science. 280:1998;1934-1937.
6. Essen L., Siegert R., Lehmann W.D., Oesterhelt D. Proc. Natl. Acad. Sci. U. S. A. 95:1998;11673-11678.
7. Sato H., Takeda K., Tani K., Hino T., Okada T., Nakasako M., Kamiya N., Kouyama T. Acta Crystallogr., D. 55:1999;1251-1256.
8. Havelka W.A., Henderson R., Heymann D., Oesterhelt D. J. Mol. Biol. 234:1993;837-846.
9. Kolbe M., Besir H., Essen L.-O., Oesterhelt D. Science. 288:2000;1358-1359.
10. Kunji E.R., Spudich E.N., Grishammer R., Henderson R., Spudich J.L. J. Mol. Biol. 308:2001;279-293.
11. Luecke H., Sobert B., Lanyi J.K., Spudich E.N., Spudich J.L. Science. 293:2001;1499-1503.
12. Royant A., Nollert R.A., Edman P., Neutze R., Landau E.M., Pebay-Peyroula E., Navaro J. Proc. Natl. Acad. Sci. U. S. A. 28:2001;10131-10136.
13. Deisenhofer J., Epp O., Miki K., Huber R., Michel H. Nature. 318:1985;618-624.
14. Kuhlbrandt W., Wang N., Fujiyoshi Y. Nature. 367:1994;614-621.
15. McDermott G., Prince S.M., Freer A.A., Hawthorthwaite-Lawless A.M., Papiz M.Z., Cogell R.J., Isacs N.W. Nature. 374:1995;517-521.
16. Blaurock A.E., Stoeckenius W. Nat., New Biol. 2:1971;152-155.
17. Luecke H., Shobert B., Richter H.T., Cartaille J.P., Lanyi J.K. J. Mol. Biol. 291:1999;899-911.
18. Belrhali H., Nollert P., Royant A., Menzel C., Rosenbusch J.P., Landau E.M., Pebay-Peyroula E. Structure. 7:1999;909-917.
19. Sternberg B., L'Hostis C., Whiteway C.A., Watts A. Biochim. Biophys. Acta. 1108:1992;21-30.
20. Gale P. Biochem. Biophys. Res. Commun. 196:1993;879-884.
21. Sternberg B., Gale P., Watts A. Biochim. Biophys. Acta. 980:1989;117-126.
22. Watts A. Biophys. Chem. B. 55:1995;137-151.
23. Sabra M.C., Utidehaag J.C.M., Watts A. Biophys. J. 75:1998;1180-1188.
24. Krebs M.P., Li W., Halambeck P. J. Mol. Biol. 267:1997;172-183.
25. Krebs M.P., Isenbarger T.A. Biochim. Biophys. Acta. 1460:2000;15-26.
26. Dencher N.A., Heyn M.P. FEBS Lett. 108:1979;307-310.
27. Dencher N.A., Kohl K.-D., Heyn M.P. Biochemistry. 22:1983;1323-1334.
28. Milder S.J., Thorgeirsson T.E., Mierke L.J., Stroud R.M., Kliger D.S. Biochemistry. 30:1991;1751-1761.
29. Dencher N.A., Heyn M.P.C. Methods Enzymol. 88:1978;5-10.
30. Varo G., Lanyi J.K. Biochemistry. 30:1991;7165-7171.
31. Wang J., Links S., Heyes C.D., El-Sayed M.A. Biophys. J. 83:2002;1557-1566.
32. Saitô H., Tuzi S., Yamaguchi S., Tanio M., Naito A. Biochim. Biophys. Acta. 1460:2000;39-48.
33. Saitô H., Tuzi S., Tanio M., Naito A. Annu. Rep. NMR Spectrosc. 47:2002;39-108.
34. Yamaguchi S., Yonebayashi K., Konishi H., Tuzi S., Naito A., Lanyi J.K., Needleman R., Saitô H. Eur. J. Biochem. 268:2001;2218-2228.
35. Saitô H., Tsuchida T., Ogawa K., Arakawa T., Yamaguchi S., Tuzi S. Biochim. Biophys. Acta. 1565:2002;97-106.
36. Yonebayashi K., Yamaguchi S., Tuzi S., Saitô H. Eur. Biophys. J. 32:2003;1-11.
37. Saitô H., Mikami J., Yamaguchi S., Tanio M., Kira A., Arakawa T., Yamamoto K., Tuzi S. Magn. Reson. Chem. 2003;. (in press).
38. Tuzi S., Hasegawa J., Kawaminami R., Naito A., Saitô H. Biophys. J. 81:2001;425-434.
39. Arakawa T., Shimono K., Yamaguchi S., Tuzi S., Sudo Y., Kamo N., Saitô H. FEBS Lett. 536:2003;237-240.
40. Ohnishi H., McCance E.M., Gibbons N.E. Can. J. Microbiol. 11:1965;365-373.
41. Oesterhelt D., Stoeckenius W. Proc. Natl. Acad. Sci. U. S. A. 70:1973;2853-2857.
42. Tanio M., Tuzi S., Yamaguchi S., Konishi H., Naito A., Needleman R., Lanyi J.K., Saitô H. Biochim. Biophys. Acta. 1375:1998;84-92.
43. Tuzi S., Yamaguchi S., Naito A., Needleman R., Lanyi J.K., Saitô H. Biochemistry. 35:1996;7520-7527.
44. Yamaguchi S., Tuzi S., Yonebayashi K., Naito A., Needleman R., Lanyi J.K., Saitô H. J. Biochem. (Tokyo). 129:2001;373-382.
45. Rothwell W.P., Waugh J.S. J. Chem. Phys. 74:1981;2721-2732.
46. Suwelack D., Rothwell W.P., Waugh J.S. J. Chem. Phys. 73:1980;2559-2569.
47. Barre P., Yamaguchi S., Saitô H., Huster D. Eur. Biophys. J. 2003;. (in press).
48. Kimura S., Naito A., Tuzi S., Saitô H. Biopolymers. 58:2001;78-88.
49. Kawase Y., Tanio M., Kira A., Yamaguchi S., Tuzi S., Naito A., Kataoka M., Lanyi J.K., Needleman R., Saitô H. Biochemistry. 39:2000;14472-14480.
50. Yamaguchi S., Tuzi S., Tanio M., Naito A., Lanyi J.K., Needleman J., Saitô H. J. Biochem. (Tokyo). 127:2000;861-869.
51. Saitô H., Yokoi M. J. Biochem. (Tokyo). 111:1992;376.
52. Kamihira M., Naito A., Nishimura K., Tuzi S., Saitô H. J. Phys. Chem. B. 102:1998;2826-2834.
53. Tuzi S., Yamaguchi S., Tanio M., Konishi H., Inoue S., Naito A., Needleman R., Lanyi J.K., Saitô H. Biophys. J. 76:1999;1523-1531.
54. Haltia T., Freire E. Biochim. Biophys. Acta. 1228:1995;1-27.