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Volumn 226, Issue 1, 2003, Pages 135-144

Two-component systems in Prochlorococcus MED4: Genomic analysis and differential expression under stress

Author keywords

Cyanobacterium; Genome; Histidine kinase; Response regulator; Reverse transcription polymerase chain reaction

Indexed keywords

BACTERIAL ENZYME; BACTERIAL PROTEIN; BACTERIAL RNA; MESSENGER RNA; PROTEIN HISTIDINE KINASE; RESPONSE REGULATOR PROTEIN; UNCLASSIFIED DRUG; PROTEIN KINASE; PROTEIN-HISTIDINE KINASE;

EID: 0642277748     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1097(03)00587-1     Document Type: Article
Times cited : (32)

References (38)
  • 1
    • 0024398149 scopus 로고
    • Protein phosphorylation and regulation of adaptative responses in bacteria
    • Stock J.B., Ninfa A.D., Stock A.M. Protein phosphorylation and regulation of adaptative responses in bacteria. Microbiol. Rev. 53:1989;450-490.
    • (1989) Microbiol. Rev. , vol.53 , pp. 450-490
    • Stock, J.B.1    Ninfa, A.D.2    Stock, A.M.3
  • 3
    • 0035019043 scopus 로고    scopus 로고
    • Genomic analysis of the histidine kinase family in bacteria and archea
    • Kim D., Forst S. Genomic analysis of the histidine kinase family in bacteria and archea. Microbiology. 147:2001;1197-1212.
    • (2001) Microbiology , vol.147 , pp. 1197-1212
    • Kim, D.1    Forst, S.2
  • 4
    • 0027056677 scopus 로고
    • Communication modules in bacterial signaling proteins
    • Parkinson J.C., Kofoid E.C. Communication modules in bacterial signaling proteins. Annu. Rev. Genet. 26:1992;71-112.
    • (1992) Annu. Rev. Genet. , vol.26 , pp. 71-112
    • Parkinson, J.C.1    Kofoid, E.C.2
  • 5
    • 0029796977 scopus 로고    scopus 로고
    • Analysis of two-component signal transduction systems involved in transcriptional regulation
    • Hakenbeck R., Stock J.B. Analysis of two-component signal transduction systems involved in transcriptional regulation. Methods Enzymol. 273:1996;281-300.
    • (1996) Methods Enzymol. , vol.273 , pp. 281-300
    • Hakenbeck, R.1    Stock, J.B.2
  • 6
    • 0033009854 scopus 로고    scopus 로고
    • Prochlorococcus, a marine photosynthetic prokaryote of global significance
    • Partensky F., Hess W.R., Vaulot D. Prochlorococcus, a marine photosynthetic prokaryote of global significance. Microbiol. Mol. Biol. Rev. 63:1999;106-127.
    • (1999) Microbiol. Mol. Biol. Rev. , vol.63 , pp. 106-127
    • Partensky, F.1    Hess, W.R.2    Vaulot, D.3
  • 7
    • 0032482462 scopus 로고    scopus 로고
    • Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes
    • Moore L.R., Rocap G., Chisholm S.W. Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes. Nature. 393:1998;464-467.
    • (1998) Nature , vol.393 , pp. 464-467
    • Moore, L.R.1    Rocap, G.2    Chisholm, S.W.3
  • 8
    • 8544229062 scopus 로고    scopus 로고
    • The divinyl-chlorophyll a/b-protein complexes of two strains of the oxyphototrophic marine prokaryote Prochlorococcus - Characterization and response to changes in growth irradiance
    • Partensky F., LaRoche J., Wyman K., Falkowski P.G. The divinyl-chlorophyll a/b-protein complexes of two strains of the oxyphototrophic marine prokaryote Prochlorococcus - Characterization and response to changes in growth irradiance. Photosynth. Res. 51:1997;209-222.
    • (1997) Photosynth. Res. , vol.51 , pp. 209-222
    • Partensky, F.1    Laroche, J.2    Wyman, K.3    Falkowski, P.G.4
  • 9
    • 0030608407 scopus 로고    scopus 로고
    • Compilation of all genes encoding bacterial two-component signal transducers in the genome of cyanobacterium, Synechocystis sp. strain PCC 6803
    • Mizuno T., Kaneko T., Tabata S. Compilation of all genes encoding bacterial two-component signal transducers in the genome of cyanobacterium, Synechocystis sp. strain PCC 6803. DNA Res. 3:1996;407-414.
    • (1996) DNA Res. , vol.3 , pp. 407-414
    • Mizuno, T.1    Kaneko, T.2    Tabata, S.3
  • 11
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:1997;4876-4882.
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 13
    • 0031973704 scopus 로고    scopus 로고
    • Bacterial transcript imaging by hybridization of total RNA to oligonucleotide arrays
    • de Saizieu A., Certa U., Warrington J., Gray C., Keck W., Mous J. Bacterial transcript imaging by hybridization of total RNA to oligonucleotide arrays. Nat. Biotechnol. 16:1998;45-48.
    • (1998) Nat. Biotechnol. , vol.16 , pp. 45-48
    • De Saizieu, A.1    Certa, U.2    Warrington, J.3    Gray, C.4    Keck, W.5    Mous, J.6
  • 14
    • 0033808824 scopus 로고    scopus 로고
    • Isolation of regulated genes of the cyanobacterium Synechocystis sp. strain PCC 6803 by differential display
    • Bhaya D., Vaulot D., Amin P., Takahashi A., Grossman A.R. Isolation of regulated genes of the cyanobacterium Synechocystis sp. strain PCC 6803 by differential display. J. Bacteriol. 182:2000;5692-5699.
    • (2000) J. Bacteriol. , vol.182 , pp. 5692-5699
    • Bhaya, D.1    Vaulot, D.2    Amin, P.3    Takahashi, A.4    Grossman, A.R.5
  • 17
    • 0027532540 scopus 로고
    • Phosphorylation and dephosphorylation catalyzed in vitro by purified components of the nitrate sensing system, NarX and NarL
    • Walker M.S., DeMoss J.A. Phosphorylation and dephosphorylation catalyzed in vitro by purified components of the nitrate sensing system, NarX and NarL. J. Biol. Chem. 268:1993;8391-8393.
    • (1993) J. Biol. Chem. , vol.268 , pp. 8391-8393
    • Walker, M.S.1    Demoss, J.A.2
  • 19
    • 0037126659 scopus 로고    scopus 로고
    • Genomic analysis of protein kinases, protein phosphatases and two-component regulatory systems of the cyanobacterium Anabaena sp. strain PCC 7120
    • Wang L., Sun Y.P., Chen W.L., Li J.H., Zhang C.C. Genomic analysis of protein kinases, protein phosphatases and two-component regulatory systems of the cyanobacterium Anabaena sp. strain PCC 7120. FEMS Microbiol. Lett. 217:2002;155-165.
    • (2002) FEMS Microbiol. Lett. , vol.217 , pp. 155-165
    • Wang, L.1    Sun, Y.P.2    Chen, W.L.3    Li, J.H.4    Zhang, C.C.5
  • 20
    • 1842465480 scopus 로고    scopus 로고
    • Nitrogen fixation: Analysis of the genome of the Nostoc punctiforme
    • (Finan, T.M., O'Brian, M.R., Layzell, D.B., Vessey, J.K, and Newton, W., Eds.), CABI, New York.
    • Thiel, T., Meeks, J.C, Elhai, J., Potts, M., Larimer, F., Lamerdin, J., Predki, P., and Atlas, R. (2002) Nitrogen fixation: analysis of the genome of the Nostoc punctiforme. In: Nitrogen Fixation: Global Perspectives (Finan, T.M., O'Brian, M.R., Layzell, D.B., Vessey, J.K, and Newton, W., Eds.), pp. 88-92. CABI, New York.
    • (2002) Nitrogen Fixation: Global Perspectives , pp. 88-92
    • Thiel, T.1    Meeks, J.C.2    Elhai, J.3    Potts, M.4    Larimer, F.5    Lamerdin, J.6    Predki, P.7    Atlas, R.8
  • 21
    • 0031589010 scopus 로고    scopus 로고
    • Compilation of all genes encoding two-component phosphotransfer signal transducers in the genome of Escherichia coli
    • Mizuno T. Compilation of all genes encoding two-component phosphotransfer signal transducers in the genome of Escherichia coli. DNA Res. 4:1997;161-168.
    • (1997) DNA Res. , vol.4 , pp. 161-168
    • Mizuno, T.1
  • 22
    • 0032911313 scopus 로고    scopus 로고
    • Two-component signal transduction in Bacillus subtilis: How one organism sees its world
    • Fabret C., Feher V.A., Hoch J.A. Two-component signal transduction in Bacillus subtilis: how one organism sees its world. J. Bacteriol. 181:1999;1975-1983.
    • (1999) J. Bacteriol. , vol.181 , pp. 1975-1983
    • Fabret, C.1    Feher, V.A.2    Hoch, J.A.3
  • 24
    • 0029976302 scopus 로고    scopus 로고
    • The signal-transduction network for Pho regulation in Bacillus subtilis
    • Hulett F.M. The signal-transduction network for Pho regulation in Bacillus subtilis. Mol. Microbiol. 19:1996;933-939.
    • (1996) Mol. Microbiol. , vol.19 , pp. 933-939
    • Hulett, F.M.1
  • 25
    • 0031898938 scopus 로고    scopus 로고
    • Sites internal to the coding regions of phoA and pstS bind PhoP and are required for full promoter activity
    • Liu W., Qi Y., Hulett F.M. Sites internal to the coding regions of phoA and pstS bind PhoP and are required for full promoter activity. Mol. Microbiol. 28:1998;119-130.
    • (1998) Mol. Microbiol. , vol.28 , pp. 119-130
    • Liu, W.1    Qi, Y.2    Hulett, F.M.3
  • 26
    • 0030427151 scopus 로고    scopus 로고
    • A putative transcriptional activator of the Crp/Fnr family from the marine cyanobacterium Synechococcus sp. WH 7803
    • Scanlan D.J., Bourne J.A., Mann N.H. A putative transcriptional activator of the Crp/Fnr family from the marine cyanobacterium Synechococcus sp. WH 7803. J. Appl. Phycol. 8:1997;565-567.
    • (1997) J. Appl. Phycol. , vol.8 , pp. 565-567
    • Scanlan, D.J.1    Bourne, J.A.2    Mann, N.H.3
  • 27
    • 0034604416 scopus 로고    scopus 로고
    • A putative transcriptional activator of the Crp/Fnr family from the marine cyanobacterium Synechococcus sp. WH 7803
    • Wu J.F., Sunda W., Boyle E.A., Karl D.M. A putative transcriptional activator of the Crp/Fnr family from the marine cyanobacterium Synechococcus sp. WH 7803. Science. 289:2000;759-762.
    • (2000) Science , vol.289 , pp. 759-762
    • Wu, J.F.1    Sunda, W.2    Boyle, E.A.3    Karl, D.M.4
  • 28
    • 0028840498 scopus 로고
    • The dspA gene product of the cyanobacterium Synechocystis sp. strain PCC 6803 influences sensitivity to chemically different growth inhibitors and has amino acid similarity to histidine protein kinases
    • Bartsevich V., Shestakov S. The dspA gene product of the cyanobacterium Synechocystis sp. strain PCC 6803 influences sensitivity to chemically different growth inhibitors and has amino acid similarity to histidine protein kinases. Microbiology. 141:1995;2915-2920.
    • (1995) Microbiology , vol.141 , pp. 2915-2920
    • Bartsevich, V.1    Shestakov, S.2
  • 29
    • 0035051326 scopus 로고    scopus 로고
    • Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis
    • Suzuki I., Kanesaki Y., Mikami K., Kanehisa M., Murata N. Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis. Mol. Microbiol. 40:2001;235-244.
    • (2001) Mol. Microbiol. , vol.40 , pp. 235-244
    • Suzuki, I.1    Kanesaki, Y.2    Mikami, K.3    Kanehisa, M.4    Murata, N.5
  • 30
    • 0036231347 scopus 로고    scopus 로고
    • NblS, a gene involved in controlling photosynthesis-related gene expression during high light and nutrient stress in Synechococcus elongatus PCC 7942
    • van Waasbergen L.G., Dolganov N., Grossman A.R. nblS, a gene involved in controlling photosynthesis-related gene expression during high light and nutrient stress in Synechococcus elongatus PCC 7942. J. Bacteriol. 184:2002;2481-2490.
    • (2002) J. Bacteriol. , vol.184 , pp. 2481-2490
    • Van Waasbergen, L.G.1    Dolganov, N.2    Grossman, A.R.3
  • 31
    • 0030884102 scopus 로고    scopus 로고
    • PAS domains S-boxes in Archea, Bacteria and sensors for oxygen and redox
    • Zhulin I., Taylor B., Dixon R. PAS domains S-boxes in Archea, Bacteria and sensors for oxygen and redox. Trends Biochem. Sci. 22:1997;331-333.
    • (1997) Trends Biochem. Sci. , vol.22 , pp. 331-333
    • Zhulin, I.1    Taylor, B.2    Dixon, R.3
  • 32
    • 0031671383 scopus 로고    scopus 로고
    • Correlation of PAS domains with electron transport associated proteins in completely sequenced microbial genomes
    • Zhulin I., Taylor B. Correlation of PAS domains with electron transport associated proteins in completely sequenced microbial genomes. Mol. Microbiol. 29:1998;1522-1523.
    • (1998) Mol. Microbiol. , vol.29 , pp. 1522-1523
    • Zhulin, I.1    Taylor, B.2
  • 33
    • 0032766134 scopus 로고    scopus 로고
    • The cytoplasmic helical linker domain of receptor histidine kinase and methyl-accepting proteins is common to many prokaryotic signaling proteins
    • Aravind L., Ponting C. The cytoplasmic helical linker domain of receptor histidine kinase and methyl-accepting proteins is common to many prokaryotic signaling proteins. FEMS Microbiol. Lett. 176:1999;111-116.
    • (1999) FEMS Microbiol. Lett. , vol.176 , pp. 111-116
    • Aravind, L.1    Ponting, C.2
  • 35
    • 0034646509 scopus 로고    scopus 로고
    • A kaiC-interacting sensory histidine kinase, SasA, necessary to sustain robust circadian oscillation in cyanobacteria
    • Iwasaki H., Williams S.B., Kitayama Y., Ishiura M., Golden S.S., Kondo T. A kaiC-interacting sensory histidine kinase, SasA, necessary to sustain robust circadian oscillation in cyanobacteria. Cell. 101:2000;223-233.
    • (2000) Cell , vol.101 , pp. 223-233
    • Iwasaki, H.1    Williams, S.B.2    Kitayama, Y.3    Ishiura, M.4    Golden, S.S.5    Kondo, T.6
  • 36
    • 0034521743 scopus 로고    scopus 로고
    • Characterization of the response of the Arabidopsis response regulator gene family to cytokinin
    • D'Agostino I.B., Deruere J., Kieber J.J. Characterization of the response of the Arabidopsis response regulator gene family to cytokinin. Plant Physiol. 124:2000;1706-1717.
    • (2000) Plant Physiol. , vol.124 , pp. 1706-1717
    • D'Agostino, I.B.1    Deruere, J.2    Kieber, J.J.3
  • 37
    • 0037183410 scopus 로고    scopus 로고
    • The ycf27 genes from cyanobacteria and eukaryotic algae: Distribution and implications for chloroplast evolution
    • Ashby M.K., Houmard J., Mullineaux C.W. The ycf27 genes from cyanobacteria and eukaryotic algae: distribution and implications for chloroplast evolution. FEMS Microbiol. Lett. 214:2002;25-30.
    • (2002) FEMS Microbiol. Lett. , vol.214 , pp. 25-30
    • Ashby, M.K.1    Houmard, J.2    Mullineaux, C.W.3
  • 38
    • 0029109040 scopus 로고
    • Comparative physiology of Synechococcus and Prochlorococcus: Influence of light and temperature on growth, pigments, fluorescence and absorptive properties
    • Moore L.R., Goericke R., Chisholm S.W. Comparative physiology of Synechococcus and Prochlorococcus: influence of light and temperature on growth, pigments, fluorescence and absorptive properties. Mar. Ecol. Prog. Ser. 116:1995;259-275.
    • (1995) Mar. Ecol. Prog. Ser. , vol.116 , pp. 259-275
    • Moore, L.R.1    Goericke, R.2    Chisholm, S.W.3


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