-
1
-
-
0030130366
-
Genome rearrangements and sorting by reversals
-
Bafna, V., P. A. Pevzner. 1996. Genome rearrangements and sorting by reversals. SIAM Journal on Computing 25 272-289.
-
(1996)
SIAM Journal on Computing
, vol.25
, pp. 272-289
-
-
Bafna, V.1
Pevzner, P.A.2
-
2
-
-
0000816725
-
Branch-and-price: Column generation for solving huge integer programs
-
Barnhart, C., E. L. Johnson, G. L. Nemhauser, M. W. P. Savelsbergh, P. H. Vance. 1998. Branch-and-price: column generation for solving huge integer programs, Operations Research 46 316-329.
-
(1998)
Operations Research
, vol.46
, pp. 316-329
-
-
Barnhart, C.1
Johnson, E.L.2
Nemhauser, G.L.3
Savelsbergh, M.W.P.4
Vance, P.H.5
-
3
-
-
84957634698
-
Fast sorting by reversal
-
Lecture Notes in Computer Science, Springer Verlag, Berlin, Germany
-
Berman, P., S. Hannenhalli. 1996. Fast sorting by reversal. Proceedings of 7th Annual Symposium on Combinatorial Pattern Matching, Lecture Notes in Computer Science, Springer Verlag, Berlin, Germany.
-
(1996)
Proceedings of 7th Annual Symposium on Combinatorial Pattern Matching
-
-
Berman, P.1
Hannenhalli, S.2
-
4
-
-
0008432431
-
On some tighter inapproximability results
-
University of Trier, Trier, Germany.
-
Berman, P., M. Karpinski. 1998. On some tighter inapproximability results. ECCC Report No. 29, University of Trier, Trier, Germany. http://www.eccc.uni-trier.de/.
-
(1998)
ECCC Report No. 29
, vol.29
-
-
Berman, P.1
Karpinski, M.2
-
5
-
-
0347122477
-
-
Personal communication
-
Blanchette, M. 1999. Personal communication.
-
(1999)
-
-
Blanchette, M.1
-
6
-
-
0008507968
-
On the tightness of the alternating-cycle Lower bound for sorting by reversals
-
Caprara, A. 1999a. On the tightness of the alternating-cycle Lower bound for sorting by reversals. Journal of Combinatorial Optimization 3 149-182.
-
(1999)
Journal of Combinatorial Optimization
, vol.3
, pp. 149-182
-
-
Caprara, A.1
-
7
-
-
0002721941
-
Sorting permutations by reversals and Eulerian cycle decompositions
-
Caprara, A. 1999b. Sorting permutations by reversals and Eulerian cycle decompositions. SIAM Journal on Discrete Mathematics 12 91-110.
-
(1999)
SIAM Journal on Discrete Mathematics
, vol.12
, pp. 91-110
-
-
Caprara, A.1
-
8
-
-
0347752754
-
A column-generation based branch-and-bound algorithm for sorting by reversals
-
M. Farach-Colton, F. S. Roberts, M. Vingron, M. Waterman, eds. AMS Press, Providence, RI
-
Caprara, A., G. Lancia, S. K. Ng. 1999a. A column-generation based branch-and-bound algorithm for sorting by reversals. M. Farach-Colton, F. S. Roberts, M. Vingron, M. Waterman, eds. Mathematical Support for Molecular Biology; DIMACS Scries in Discrete Mathematics and Theoretical Computer Science 47 213-226, AMS Press, Providence, RI.
-
(1999)
Mathematical Support for Molecular Biology; DIMACS Scries in Discrete Mathematics and Theoretical Computer Science
, vol.47
, pp. 213-226
-
-
Caprara, A.1
Lancia, G.2
Ng, S.K.3
-
9
-
-
24444453137
-
Sorting permutations by reversals through branch-and-price
-
DEIS, University of Bologna, Bologna, Italy
-
Caprara, A., G. Lancia, S. K. Ng. 1999b. Sorting permutations by reversals through branch-and-price. Research Report OR/99/1, DEIS, University of Bologna, Bologna, Italy. http://www.or.deis.unibo.it/techrep.html.
-
(1999)
Research Report
, vol.OR-99-1
-
-
Caprara, A.1
Lancia, G.2
Ng, S.K.3
-
10
-
-
0345861291
-
Improved approximation for breakpoint graph decomposition and sorting by reversals
-
Caprara, A., R. Rizzi. 2001. Improved approximation for breakpoint graph decomposition and sorting by reversals. to appear in Journal of Combinatorial Optimization.
-
(2001)
Journal of Combinatorial Optimization
-
-
Caprara, A.1
Rizzi, R.2
-
13
-
-
0001764190
-
Computing minimum-weight perfect matchings
-
Cook, W. J., A. Rohe. 1999. Computing minimum-weight perfect matchings. INFORMS Journal on Computing 11 138-148.
-
(1999)
INFORMS Journal on Computing
, vol.11
, pp. 138-148
-
-
Cook, W.J.1
Rohe, A.2
-
14
-
-
0346492113
-
-
AMS Press, Providence. RI
-
Farach-Colton, M. F. S., Roberts, M. Vingron, M. Waterman, eds. 1999. Mathematical Support for Molecular Biology; DIMACS Series in Discrete Mathematics and Theoretical Computer Science 47, AMS Press, Providence. RI.
-
(1999)
Mathematical Support for Molecular Biology; DIMACS Series in Discrete Mathematics and Theoretical Computer Science
, vol.47
-
-
Farach-Colton, M.F.S.1
Roberts2
Vingron, M.3
Waterman, M.4
-
15
-
-
0025488353
-
A note on bounding a class of linear programming problems, including cutting stock problems
-
Farley, A. A. 1990. A note on bounding a class of linear programming problems, including cutting stock problems. Operations Research 38 922-923.
-
(1990)
Operations Research
, vol.38
, pp. 922-923
-
-
Farley, A.A.1
-
16
-
-
0022368688
-
Conservation of genome form but not sequence in the transcription antitermination determinants of bacterio-phages λ, φ21 and P22
-
Franklin, N. 1985. Conservation of genome form but not sequence in the transcription antitermination determinants of bacterio-phages λ, φ21 and P22. Journal of Molecular Evolution 181 75-84.
-
(1985)
Journal of Molecular Evolution
, vol.181
, pp. 75-84
-
-
Franklin, N.1
-
17
-
-
0347752755
-
Matching
-
M. O. Ball, T. L. Magnanti, C. L. Monma, G. L. Nemhauser, eds. North Holland, Amsterdam, The Netherlands
-
Gerards, A. M. H. 1995. Matching. M. O. Ball, T. L. Magnanti, C. L. Monma, G. L. Nemhauser, eds. Networks; Handbooks in Operations Research and Management Sciences, North Holland, Amsterdam, The Netherlands.
-
(1995)
Networks; Handbooks in Operations Research and Management Sciences
-
-
Gerards, A.M.H.1
-
18
-
-
0346492115
-
-
Personal communication
-
Hannenhalli, S. 1997. Personal communication.
-
(1997)
-
-
Hannenhalli, S.1
-
19
-
-
84941152013
-
To cut ...or not to cut (applications of comparative physical maps in molecular evolution)
-
ACM Press, New York, NY
-
Hannenhalli, S., P. A. Pevzner. 1996. To cut ...or not to cut (applications of comparative physical maps in molecular evolution). Proceedings of the 7th Annual ACM-SIAM Symposium on Discrete Algorithms, ACM Press, New York, NY, 304-313.
-
(1996)
Proceedings of the 7th Annual ACM-SIAM Symposium on Discrete Algorithms
, pp. 304-313
-
-
Hannenhalli, S.1
Pevzner, P.A.2
-
20
-
-
0002856077
-
Transforming cabbage into turnip (polynomial algorithm for sorting signed permutations by reversals)
-
Hannenhalli, S, P. A. Pevzner. 1999. Transforming cabbage into turnip (polynomial algorithm for sorting signed permutations by reversals). Journal of the ACM 48 1-27.
-
(1999)
Journal of the ACM
, vol.48
, pp. 1-27
-
-
Hannenhalli, S.1
Pevzner, P.A.2
-
21
-
-
24444479598
-
Sorting by reversals: A conjecture of Kececioglu and Sankoff
-
Dept. of Computing Science, University of Glasgow, Glasgow, Scotland
-
Irving, R. W., D. A. Christie. 1995. Sorting by reversals: a conjecture of Kececioglu and Sankoff. Technical Report TR-1995-12, Dept. of Computing Science, University of Glasgow, Glasgow, Scotland, http://www.dcs.gla.ac.uk/tild;christie/.
-
(1995)
Technical Report
, vol.TR-1995-12
-
-
Irving, R.W.1
Christie, D.A.2
-
22
-
-
0033295439
-
Faster and simpler algorithm for sorting signed permutations by reversals
-
Kaplan, H., R. Shamir, R. E. Tarjan. 2000. Faster and simpler algorithm for sorting signed permutations by reversals. SIAM Journal on Computing 29 880-892.
-
(2000)
SIAM Journal on Computing
, vol.29
, pp. 880-892
-
-
Kaplan, H.1
Shamir, R.2
Tarjan, R.E.3
-
23
-
-
84896575459
-
Efficient bounds for oriented chromosome inversion distance
-
Lecture Notes in Computer Science Springer Verlag, Berlin, Germany
-
Kececioglu, J., D. Sankoff. 1994. Efficient bounds for oriented chromosome inversion distance. Proceedings of 5th Annual Symposium on Combinatorial Pattern Matching, Lecture Notes in Computer Science 807, Springer Verlag, Berlin, Germany, 307-325.
-
(1994)
Proceedings of 5th Annual Symposium on Combinatorial Pattern Matching
, vol.807
, pp. 307-325
-
-
Kececioglu, J.1
Sankoff, D.2
-
24
-
-
0029185212
-
Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement
-
Kececioglu, J., D. Sankoff. 1995. Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement. Algorithmica 13 180-210.
-
(1995)
Algorithmica
, vol.13
, pp. 180-210
-
-
Kececioglu, J.1
Sankoff, D.2
-
25
-
-
0345901561
-
Sequencing and scheduling: Algorithms and complexity
-
S. C. Graves, P. H. Zipkin, A. H. G. Rinnooy Kan, eds. North Holland, Amsterdam, The Netherlands
-
Lawler, E. L., J. K. Lenstra, A. H. G. Rinnooy Kan, D. B. Shmoys. 1993. Sequencing and scheduling: algorithms and complexity. S. C. Graves, P. H. Zipkin, A. H. G. Rinnooy Kan, eds. Logistics of Production and Inventory; Handbooks in Operations Research and Management Sciences, North Holland, Amsterdam, The Netherlands.
-
(1993)
Logistics of Production and Inventory; Handbooks in Operations Research and Management Sciences
-
-
Lawler, E.L.1
Lenstra, J.K.2
Rinnooy Kan, A.H.G.3
Shmoys, D.B.4
-
26
-
-
0001515729
-
A column generation approach for exact graph coloring
-
Merhotra, A., M. A. Trick. 1996. A column generation approach for exact graph coloring. INFORMS Journal on Computing 8 344-354.
-
(1996)
INFORMS Journal on Computing
, vol.8
, pp. 344-354
-
-
Merhotra, A.1
Trick, M.A.2
-
27
-
-
0026124209
-
A branch-and-cut algorithm for the resolution of large-scale symmetric traveling salesman problems
-
Padberg, M. W., G. Rinaldi. 1991. A branch-and-cut algorithm for the resolution of large-scale symmetric traveling salesman problems. SIAM Review 33 60-100.
-
(1991)
SIAM Review
, vol.33
, pp. 60-100
-
-
Padberg, M.W.1
Rinaldi, G.2
-
28
-
-
0027249978
-
Analytical approaches to genomic evolution
-
Sankoff, D. 1993. Analytical approaches to genomic evolution. Biochimie 75 409-413.
-
(1993)
Biochimie
, vol.75
, pp. 409-413
-
-
Sankoff, D.1
-
29
-
-
0026680446
-
Gene order comparisons for phylogenetic inference: Evolution of the mitochondrial genome
-
Sankoff, D., G. Leduc, N. Antoine, B. Paquin, B. F. Lang, R. Cedergren. 1992. Gene order comparisons for phylogenetic inference: evolution of the mitochondrial genome. Proc. Natl. Acad. Sci. USA 89 6575-6579.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 6575-6579
-
-
Sankoff, D.1
Leduc, G.2
Antoine, N.3
Paquin, B.4
Lang, B.F.5
Cedergren, R.6
-
31
-
-
84948964916
-
An easy case of sorting by reversals
-
Lecture Notes in Computer Science Springer Verlag, Berlin, Germany
-
Tran, N. 1997. An easy case of sorting by reversals. Proceedings of the 8th Annual Symposium on Combinatorial Pattern Matching, Lecture Notes in Computer Science 1264, Springer Verlag, Berlin, Germany, 83-89.
-
(1997)
Proceedings of the 8th Annual Symposium on Combinatorial Pattern Matching
, vol.1264
, pp. 83-89
-
-
Tran, N.1
-
32
-
-
0028433926
-
Solving binary cutting stock problems by column generation and branch-and-bound
-
Vance, P. H., C. Barnhart, E. L. Johnson, G. L. Nemhauser. 1994. Solving binary cutting stock problems by column generation and branch-and-bound. Computational Optimization and Applications 3 111-130.
-
(1994)
Computational Optimization and Applications
, vol.3
, pp. 111-130
-
-
Vance, P.H.1
Barnhart, C.2
Johnson, E.L.3
Nemhauser, G.L.4
-
33
-
-
0020433102
-
The chromosome inversion problem
-
Watterson, G. A., W. J. Ewens, T. E. Hall, A. Morgan. 1982. The chromosome inversion problem Journal of Theoretical Biology 99 1-7.
-
(1982)
Journal of Theoretical Biology
, vol.99
, pp. 1-7
-
-
Watterson, G.A.1
Ewens, W.J.2
Hall, T.E.3
Morgan, A.4
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