Identification and Characterization of An Intermediate in the Alkali Degradation of (6-4) Photoproduct-containing DNA

Journal of Biological Chemistry

Volumn 278, Issue 51, 2003, Pages 51968-51973

  Higurashi, Miho ^a   Ohtsuki, Takashi ^a   Inase, Aki ^b   Kusumoto, Rika ^b   Masutani, Chikahide ^b   Hanaoka, Fumio ^b   Iwai, Shigenori ^a,b  

^a UNIVERSITY OF TOKYO   (Japan)

^b OSAKA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION SPECTROSCOPY; ALKALINITY; BIOCHEMISTRY; COMPLEXATION; ENZYMES; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HYDROLYSIS; MASS SPECTROMETRY; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PHOTODEGRADATION; REACTION KINETICS; ULTRAVIOLET RADIATION;

OLIGONUCLEOTIDES; TRANSLESION SYNTHESIS;

DNA;

ALKALI METAL; OLIGONUCLEOTIDE; PHOTOPROTEIN; THYMINE;

ANIMAL CELL; ARTICLE; CHEMICAL REACTION KINETICS; DNA DAMAGE; DNA DEGRADATION; DNA REPLICATION; DNA STRAND BREAKAGE; EXCISION REPAIR; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HYDROLYSIS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN ANALYSIS; RADIATION EXPOSURE; ULTRAVIOLET RADIATION;

ALKALIES; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DNA DAMAGE; HYDROLYSIS; MASS SPECTROMETRY; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; OLIGONUCLEOTIDES; PHOTOLYSIS; PYRIMIDINE DIMERS; ULTRAVIOLET RAYS;

ANIMALIA;

EID: 0347695017     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M307186200     Document Type: Article

References (34)

1. Ravanat, J.-L., Douki, T., and Cadet, J. (2001) J. Photochem. Photobiol. B Biol. 63, 88-102
2. You, Y.-H., Lee, D.-H., Yoon, J.-H., Nakajima, S., Yasui, A., and Pfeifer, G. P. (2001) J. Biol. Chem. 276, 44688-44694
3. Lemaire, D. G. E., and Ruzsicska, B. P. (1993) Biochemistry 32, 2525-2533
4. Peng, W., and Shaw, B. R. (1996) Biochemistry 35, 10172-10181
5. Horsfall, M. J., Borden, A., and Lawrence, C. W. (1997) J. Bacteriol. 179, 2835-2839
6. Tu, Y., Dammann, R., and Pfeifer, G. P. (1998) J. Mol. Biol. 284, 297-311
7. Lippke, J. A., Gordon, L. K., Brash, D. E., and Haseltine, W. A. (1981) Proc. Natl. Acad. Sci. U. S. A. 78, 3388-3392
8. Franklin, W. A., Lo, K. M., and Haseltine, W. A. (1982) J. Biol. Chem. 257, 13535-13543
9. Pfeifer, G. P., Drouin, R., Riggs, A. D., and Holmquist, G. P. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 1374-1378
10. Smith, C. A., and Taylor, J.-S. (1993) J. Biol. Chem. 268, 11143-11151
11. McHugh, P. J., and Knowland, J. (1995) Nucleic Acids Res. 23, 1664-1670
12. Yoon, J.-H., Lee, C.-S., O'Connor, T. R., Yasui, A., and Pfeifer, G. P. (2000) J. Mol. Biol. 299, 681-693
13. Tornaletti, S., and Pfeifer, G. P. (1995) J. Mol. Biol. 249, 714-728
14. Pfeifer, G. P., and Tornaletti, S. (1997) Methods 11, 189-196
15. Mazumder, A., Gerlt, J. A., Absalon, M. J., Stubbe, J., Cunningham, R. P., Withka, J., and Bolton, P. H. (1991) Biochemistry 30, 1119-1126
16. Aso, M., Kondo, M., Suemune, H., and Hecht, S. M. (1999) J. Am. Chem. Soc. 121, 9023-9033
17. LeClerc, J. E., Borden, A., and Lawrence, C. W. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 9685-9689
18. Smith, C. A., Wang, M., Jiang, N., Che, L., Zhao, X., and Taylor, J.-S. (1996) Biochemistry 35, 4146-4154
19. Kamiya, H., Iwai, S., and Kasai, H. (1998) Nucleic Acids Res. 26, 2611-2617
20. Masutani, C., Araki, M., Yamada, A., Kusumoto, R., Nogimori, T., Maekawa, T., Iwai, S., and Hanaoka, F. (1999) EMBO J. 18, 3491-3501
21. Masutani, C., Kusumoto, R., Iwai, S., and Hanaoka, F. (2000) EMBO J. 19, 3100-3109
22. Wood, R. D. (1997) J. Biol. Chem. 272, 23465-23468
23. Sugasawa, K., Ng, J. M. Y., Masutani, C., Iwai, S., van der Spek, P. J., Eker, A. P. M., Hanaoka, F., Bootsma, D., and Hoeijmakers, J. H. J. (1998) Mol. Cell 2, 223-232
24. Sugasawa, K., Okamoto, T., Shimizu, Y., Masutani, C., Iwai, S., and Hanaoka, F. (2001) Genes Dev. 15, 507-521
25. Iwai, S., Shimizu, M., Kamiya, H., and Ohtsuka, E. (1996) J. Am. Chem. Soc. 118, 7642-7643
26. Iwai, S. (2000) Angew. Chem. Int. Ed. Engl. 39, 3874-3876
27. Iwai, S. (2001) Chem. Eur. J. 7, 4343-4351
28. Lhomme, J., Constant, J.-F., and Demeunynck, M. (1999) Biopolymers 52, 65-83
29. Klungland, A., Höss, M., Gunz, D., Constantinou, A., Clarkson, S. G., Doetsch, P. W., Bolton, P. H., Wood, R. D., and Lindahl, T. (1999) Mol. Cell 3, 33-42
30. Ide, H., Kow, Y. W., and Wallace, S. S. (1985) Nucleic Acids Res. 13, 8035-8052
31. Baillet, S., and Behr, J.-P. (1995) Tetrahedron. Lett. 36, 8981-8984
32. Dubey, I., Pratviel, G., Robert, A., and Meunier, B. (2001) Nucleosides Nucleotides Nucleic Acids 20, 1463-1471
33. Ide, H., Melamede, R. J., and Wallace, S. S. (1987) Biochemistry 26, 964-969
34. Ide, H., Petrullo, L. A., Hatahet, Z., and Wallace, S. S. (1991) J. Biol. Chem. 266, 1469-1477