Distance distributions and electron-density characteristics of protein models

Acta Crystallographica - Section D Biological Crystallography

Volumn 59, Issue 12, 2003, Pages 2104-2113

  Zwart, P H ^a   Lamzin, V S ^a  

^a DESY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

ARTICLE; CHEMICAL MODEL; CHEMISTRY; ELECTRICITY; METHODOLOGY; STATISTICAL DISTRIBUTION; STATISTICAL MODEL; X RAY CRYSTALLOGRAPHY;

CRYSTALLOGRAPHY, X-RAY; ELECTROSTATICS; MODELS, CHEMICAL; MODELS, STATISTICAL; PROTEINS; STATISTICAL DISTRIBUTIONS;

EID: 0347693080     PISSN: 09074449     EISSN: None     Source Type: Journal    
DOI: 10.1107/S0907444903018596     Document Type: Article

References (38)

1. Abramovicz, M. & Stegun, I. A. (1974). Handbook of Mathematical Functions. New York: Dover.
2. Arfken, G. B. & Weber, H. J. (1995). Mathematical Methods for Physicists. San Diego: Academic Press.
3. Andersen, A. H. & Kirsch, J. E. (1993). Med. Phys. 23, 857-869.
4. Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N. & Bourne, P. E. (2000). Nucleic Acids Res. 28, 235-242.
5. Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F. Jr, Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T. & Tasumi, M. (1977). J. Mol. Biol. 112, 535-542.
6. Bricogne, G. (1997). Methods Enzymol. 276, 361-423.
7. Colovos, C., Toth, E. A. & Yeates, T. O. (2000). Acta Cryst. D56, 1421-1429.
8. Cowtan, K. (2002). J. Appl. Cryst. 35, 655-663.
9. Cox, E. G. & Cruickshank, D. W. J. (1948). Acta Cryst. 1, 92-93.
10. Cruickshank, D. W. J. (1999). Acta Cryst. D55, 583-601.
11. Chapman, M. S. (1995). Acta Cryst. A51, 69-80.
12. Dudewicz, E. J. & Mishra, S. N. (1988). Modern Mathematical Statistics. New York: Wiley.
13. James, R. W. (1948). Acta Cryst. 1, 132-134.
14. Kleywegt, G. J., Harris, M. R., Zou, J. Y., Taylor, T. C., Wählby, A. & Jones, T. A. (2003). Uppsala Electron Density Server, http:// fsrv1.bmc.uu.se/eds/.
15. Lebedev, N. N. (1972). Special Functions and Their Applications, translated and edited by R. A. Silverman. New York: Dover.
16. Lunin, V. Yu. & Skovodora, T. P. (1995). Acta Cryst. A51, 880-887.
17. Lunin, V. Yu. & Woolfson, M. M. (1993). Acta Cryst. D49, 530-533.
18. Luzzati, V. (1952). Acta Cryst. 5, 802-810.
19. Miller, R., DeTitta, G. T., Jones, R., Langs, D. A., Weeks, C. M. & Hauptman, H. A. (1993). Science, 259, 1430-1433.
20. Morris, R. J., Perrakis, A. & Lamzin, V. S. (2002). Acta Cryst. D58, 968-975.
21. Morris, R. J., Perrakis, A. & Lamzin, V. S. (2003). In the press.
22. Morris, R. J., Zwart, P. H., Cohen, S., Fernandez, F. J., Kakaris, M., Kirillova, O., Vonrhein, C., Perrakis, A. & Lamzin, V. S. (2003). Submitted.
23. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
24. Perrakis, A., Morris, R. & Lamzin, V. S. (1999). Nature Struct. Biol. 6, 458-463.
25. Pannu, N. S. & Read, R. J. (1996). Acta Cryst. A52, 659-668.
26. Read, R. J. (1986). Acta Cryst. A42, 140-149.
27. Read, R. J. (1990). Acta Cryst. A46, 900-912.
28. Scheres, H. W. S. & Gros, P. (2001). Acta Cryst. D57, 1820-1828.
29. Stenkamp, R. E. & Jensen, L. H. (1984). Acta Cryst. A40, 251-254.
30. Terwilliger, T. (2000). Acta Cryst. D57, 1755-1762.
31. Terwilliger, T. (2003) Acta Cryst. D59, 38-44.
32. Usón, I. & Sheldrick, G. M. (1999). Curr. Opin. Struct. Biol. 9, 643-648.
33. Vaguine, A. (1999). Acta Cryst. D55, 191-205.
34. Weiss, M. (2001). J. Appl. Cryst. 34, 130-135.
35. Weisstein, E. (1999). CRC Concise Encyclopedia of Mathematics. New York: Chapman & Hall.
36. Wilson, A. J. C. (1942). Nature (London), 150, 152.
37. Wilson, A. J. C. (1949). Acta Cryst. 2, 318-321.
38. Zwart, P. H. & Lamzin, V. S. (2003). Acta Cryst. D. In the press.