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Volumn 20, Issue 10, 2003, Pages 1633-1641

Genie mutation rates in mammals: Local similarity, chromosomal heterogeneity, and X-versus-autosome disparity

Author keywords

Comparative genomics; Male driven evolution; Molecular evolution; Mutation rate; Sex chromosomes; Synteny bins

Indexed keywords

ARTICLE; AUTOSOME; EVOLUTION; GENE MUTATION; GENETIC CODE; GENETIC HETEROGENEITY; HUMAN; MAMMAL; MOUSE; MUTATION RATE; NONHUMAN; RAT; STATISTICAL ANALYSIS; X CHROMOSOME; X CHROMOSOME LINKAGE; ANIMAL; FEMALE; GENETIC VARIABILITY; MALE; MOLECULAR EVOLUTION; MUTATION; SYNTENY;

EID: 0347601042     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/molbev/msg178     Document Type: Article
Times cited : (41)

References (32)
  • 1
    • 0031063186 scopus 로고    scopus 로고
    • Analysis of mutation rates in the SMCY/SMCX genes shows that mammalian evolution is male driven
    • Agulnik, A., C. Bishop, J. Lerner, S. Agulnik, and V. Solovyev. 1997. Analysis of mutation rates in the SMCY/SMCX genes shows that mammalian evolution is male driven. Mamm. Genome 8:134-138.
    • (1997) Mamm. Genome , vol.8 , pp. 134-138
    • Agulnik, A.1    Bishop, C.2    Lerner, J.3    Agulnik, S.4    Solovyev, V.5
  • 3
    • 0034632812 scopus 로고    scopus 로고
    • Unexpectedly similar rates of nucleotide substitution found in male and female hominids
    • Bohossian, H. B., H. Skaletsky, and D. Page. 2000. Unexpectedly similar rates of nucleotide substitution found in male and female hominids. Nature 406:622-625.
    • (2000) Nature , vol.406 , pp. 622-625
    • Bohossian, H.B.1    Skaletsky, H.2    Page, D.3
  • 4
    • 0028958947 scopus 로고
    • Estimating the intensity of male-driven evolution in rodents by using X-linked and Y-linked UBE 1 genes and pseudogenes
    • Chang, B., and W.-H. Li. 1995. Estimating the intensity of male-driven evolution in rodents by using X-linked and Y-linked UBE 1 genes and pseudogenes. J. Mol. Evol. 40:70-77.
    • (1995) J. Mol. Evol. , vol.40 , pp. 70-77
    • Chang, B.1    Li, W.-H.2
  • 7
    • 0036094907 scopus 로고    scopus 로고
    • Genomewide comparison of DNA sequences between humans and chimpanzees
    • Ebersberger, I., D. Metzler, C. Schwarz, and S. Paabo. 2002, Genomewide comparison of DNA sequences between humans and chimpanzees. Am. J. Hum. Genet. 70:1490-1497.
    • (2002) Am. J. Hum. Genet. , vol.70 , pp. 1490-1497
    • Ebersberger, I.1    Metzler, D.2    Schwarz, C.3    Paabo, S.4
  • 8
    • 0034924997 scopus 로고    scopus 로고
    • Positive and negative selection on the human genome
    • Fay, J. C., G. J. Wyckoff, and C.-I. Wu. 2001. Positive and negative selection on the human genome. Genetics 158:1227-1234.
    • (2001) Genetics , vol.158 , pp. 1227-1234
    • Fay, J.C.1    Wyckoff, G.J.2    Wu, C.-I.3
  • 9
    • 0028168856 scopus 로고
    • A codon-based model of nucleotide substitution for protein-coding DNA sequences
    • Goldman, N., and Z. Yang. 1994. A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol. Biol. Evol. 11:725-736.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 725-736
    • Goldman, N.1    Yang, Z.2
  • 11
    • 84959609205 scopus 로고
    • On the evolutionary adjustment of spontaneous mutation rates
    • Kimura, M. 1967. On the evolutionary adjustment of spontaneous mutation rates. Genet. Res. 9:23-34.
    • (1967) Genet. Res. , vol.9 , pp. 23-34
    • Kimura, M.1
  • 12
    • 0029074889 scopus 로고
    • Modifiers of mutation selection balance
    • Kondrashov, A. S. 1995. Modifiers of mutation selection balance. Genet. Res. 66:53-69.
    • (1995) Genet. Res. , vol.66 , pp. 53-69
    • Kondrashov, A.S.1
  • 13
    • 0036133157 scopus 로고    scopus 로고
    • Comparison of substitution rates in ZFX and ZFY introns of sheep and goat related species supports the hypothesis of male-biased mutation rates
    • Lawson, L., and G. Hewitt. 2002. Comparison of substitution rates in ZFX and ZFY introns of sheep and goat related species supports the hypothesis of male-biased mutation rates. J. Mol. Evol. 54:54-61.
    • (2002) J. Mol. Evol. , vol.54 , pp. 54-61
    • Lawson, L.1    Hewitt, G.2
  • 15
    • 0000549642 scopus 로고
    • Natural selection and mutability
    • Leigh, E. G., Jr. 1970. Natural selection and mutability. Am. Nat. 104:301-305.
    • (1970) Am. Nat. , vol.104 , pp. 301-305
    • Leigh Jr., E.G.1
  • 16
    • 0015787984 scopus 로고
    • The evolution of mutation rates
    • _. 1973. The evolution of mutation rates. Genetics 73(suppl):1-18.
    • (1973) Genetics , vol.73 , Issue.SUPPL. , pp. 1-18
  • 17
    • 0034748984 scopus 로고    scopus 로고
    • Local similarity in evolutionary rates extends over whole chromosomes in human-rodent and mouse-rat comparisons: Implications for understanding the mechanistic basis of the male mutation bias
    • Lercher, M. J., E. J. Williams, and L. D. Hurst. 2001. Local similarity in evolutionary rates extends over whole chromosomes in human-rodent and mouse-rat comparisons: implications for understanding the mechanistic basis of the male mutation bias. Mol. Biol. Evol. 18:2032-2039.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 2032-2039
    • Lercher, M.J.1    Williams, E.J.2    Hurst, L.D.3
  • 18
    • 0027403961 scopus 로고
    • Unbiased estimation of the rates of synonymous and nonsynonymous substitution
    • Li, W. H. 1993. Unbiased estimation of the rates of synonymous and nonsynonymous substitution [letter]. J. Mol. Evol. 36:96-99.
    • (1993) J. Mol. Evol. , vol.36 , pp. 96-99
    • Li, W.H.1
  • 19
    • 0037061501 scopus 로고    scopus 로고
    • Strong male-driven evolution of DNA sequences in humans and apes
    • Makova, K. D., and W.-H. Li. 2002. Strong male-driven evolution of DNA sequences in humans and apes. Nature 416:624-626.
    • (2002) Nature , vol.416 , pp. 624-626
    • Makova, K.D.1    Li, W.-H.2
  • 20
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Res. 27:209-220.
    • (1967) Cancer Res. , vol.27 , pp. 209-220
    • Mantel, N.1
  • 21
    • 0030992056 scopus 로고    scopus 로고
    • Evidence for a selectively favorable reduction in the mutation rate of the X chromosome
    • McVean, G. T., and L. D. Hurst. 1997. Evidence for a selectively favorable reduction in the mutation rate of the X chromosome. Nature 386:388-392.
    • (1997) Nature , vol.386 , pp. 388-392
    • McVean, G.T.1    Hurst, L.D.2
  • 23
    • 0037204994 scopus 로고    scopus 로고
    • A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome
    • Mural, R. J., and J. C. Venter. 2002. A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Science 296:1661-1671.
    • (2002) Science , vol.296 , pp. 1661-1671
    • Mural, R.J.1    Venter, J.C.2
  • 24
    • 0031012364 scopus 로고    scopus 로고
    • In search of molecular Darwinism
    • Sharp, P. 1997. In search of molecular Darwinism. Nature 385:111-112.
    • (1997) Nature , vol.385 , pp. 111-112
    • Sharp, P.1
  • 25
    • 0027286244 scopus 로고
    • Male-driven evolution of DNA sequences
    • Shimmin, L. C., B. H. Chang, and W. H. Li. 1993a. Male-driven evolution of DNA sequences. Nature 362:745-747.
    • (1993) Nature , vol.362 , pp. 745-747
    • Shimmin, L.C.1    Chang, B.H.2    Li, W.H.3
  • 26
    • 0027286244 scopus 로고
    • Male-driven evolution of DNA sequences
    • _. 1993b. Male-driven evolution of DNA sequences. Nature 362:745-747.
    • (1993) Nature , vol.362 , pp. 745-747
  • 27
    • 0031697167 scopus 로고    scopus 로고
    • Sensitivity of patterns of molecular evolution to alterations in methodology: A critique of Hughes and Yeager
    • Smith, N. G., and L. D. Hurst. 1998. Sensitivity of patterns of molecular evolution to alterations in methodology: a critique of Hughes and Yeager. J. Mol. Evol. 47:493-500.
    • (1998) J. Mol. Evol. , vol.47 , pp. 493-500
    • Smith, N.G.1    Hurst, L.D.2
  • 28
    • 0034542564 scopus 로고    scopus 로고
    • The evolution of mutation rates: Separating causes from conseqeunces
    • Sniegowski, P. D., P. J. Garrish, T. Johnson, and A. Shaver. 2000. The evolution of mutation rates: separating causes from conseqeunces. Bioessays 22:1057-1066.
    • (2000) Bioessays , vol.22 , pp. 1057-1066
    • Sniegowski, P.D.1    Garrish, P.J.2    Johnson, T.3    Shaver, A.4
  • 30
    • 0036729902 scopus 로고    scopus 로고
    • Molecular evolution of functional genes on the mammalian Y chromosome
    • Wyckoff, G. J., J. Li, and C.-I. Wu. 2002. Molecular evolution of functional genes on the mammalian Y chromosome. Mol. Biol. Evol. 19:1633-1636.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1633-1636
    • Wyckoff, G.J.1    Li, J.2    Wu, C.-I.3
  • 31
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:555-556.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1
  • 32
    • 0033979433 scopus 로고    scopus 로고
    • Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
    • Yang, Z., and R. Nielsen. 2000. Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol. 17:32-43.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 32-43
    • Yang, Z.1    Nielsen, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.