Picosecond time-resolved coherent anti-stokes Raman spectroscopy of the artificial bacteriorhodopsin pigment, BR6.11

Journal of Physical Chemistry A

Volumn 107, Issue 49, 2003, Pages 10787-10797

  Terentis, Andrew C ^a   Zhou, Yidong ^a   Atkinson, George H ^a   Ujj, Laszlo ^b  

^a University of Arizona   (United States)

^b UNIVERSITY OF WEST FLORIDA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; CHEMICAL BONDS; CHROMOPHORES; ELECTRONIC DENSITY OF STATES; GROUND STATE; ISOMERIZATION; MOLECULAR DYNAMICS; MOLECULAR VIBRATIONS; PHASE TRANSITIONS; RAMAN SPECTROSCOPY; SUBSTITUTION REACTIONS;

ARTIFICIAL BACTERIORHODOPSIN PIGMENT; PICOSECOND TIME RESOLVED COHERENT ANTI-STOKES RAMAN SPECTROSCOPY; STRUCTURAL DYNAMICS;

BACTERIA;

EID: 0347516328     PISSN: 10895639     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp030612g     Document Type: Article

References (41)

1. Mathies, R. A.; Lin, S. W.; Ames, J. B.; Pollard, W. T. Annu. Rev. Biophys. Biophys. Chem. 1991, 20, 491.
2. Lanyi, J. K. Int. Rev. Cytol. 1999, 187, 161.
3. Oesterhelt, D.; Tittor, J. Trends Biochem. Sci. 1989, 14, 57.
4. Subramaniam, S.; Henderson, R. Nature 2000, 406, 653.
5. Lanyi, J. K.; Luecke, H. Curr. Opin. Struct. Biol. 2001, 11, 415.
6. Mathies, R. A.; Brito Cruz, C. H.; Pollard, W. T.; Shank, C. V. Science 1988, 240, 777.
7. Atkinson, G. H.; Ujj, L.; Zhou, Y. J. Phys. Chem. A 2000, 104, 4130.
8. Doig, S. J.; Reid, P. J.; Mathies, R. A. J. Phys. Chem. 1991, 95, 6372.
9. Schobert, B.; Cupp-Vickery, J.; Hornak, V.; Smith, S.; Lanyi, J. J. Mol. Biol. 2002, 321, 715.
10. Matsui, Y.; Sakai, K.; Murakami, M.; Shiro, Y.; Adachi, S.; Okumura, H.; Kouyama, T. J. Mol. Biol. 2002, 324, 469.
11. Edman, K.; Nollert, P.; Royant, A.; Belrhali, H.; Pebay-Peyroula, E.; Hajdu, J.; Neutze, R.; Landau, E. M. Nature 1999, 401, 822.
12. Hayashi, S.; Tajkhorshid, E.; Schulten, K. Biophys. J. 2002, 83, 1281.
13. Tajkhorshid, E.; Baudry, J.; Schulten, K.; Suhai, S. Biophys. J. 2000, 78, 683.
14. Brack, T. L.; Delaney, J. K.; Atkinson, G. H.; Albeck, A.; Sheves, M.; Ottolenghi, M. Biophys. J. 1993, 65, 964.
15. Albeck, A.; Friedman, N.; Sheves, M.; Ottolenghi, M. J. Am. Chem. Soc. 1986, 108, 4614.
16. Dobler, J.; Zinth, W.; Kaiser, W.; Oesterhelt, D. Chem. Phys. Lett. 1988, 144, 215.
17. Nuss, M. C.; Zinth, W.; Kaiser, W.; Kölling, E.; Oesterhelt, D. Chem. Phys. Lett. 1985, 117, 1.
18. Delaney, J. K.; Brack, T. L.; Atkinson, G. H.; Ottolenghi, M.; Friedman, N.; Sheves, M. J. Phys. Chem. 1993, 97, 12416.
19. Ujj, L.; Zhou, Y.; Sheves, M.; Ottolenghi, M.; Ruhman, S.; Atkinson, G. H. J. Am. Chem. Soc. 2000, 122, 96.
20. Atkinson, G. H.; Zhou, Y.; Ujj, L.; Aharoni, A.; Sheves, M.; Ottolenghi, M. J. Phys. Chem. A 2002, 106, 3325.
21. Fang, J. M.; Carriker, J. D.; Balogh-Nair, V.; Nakanishi, K. J. Am. Chem. Soc. 1083, 105, 5162.
22. Delaney, J. K.; Brack, T. L.; Atkinson, G. H.; Ottolenghi, M.; Steinberg, G.; Sheves, M Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 2101.
23. Ye, T.; Friedman, N.; Gat, Y.; Atkinson, G. H.; Sheves, M.; Ottolenghi, M.; Ruhman, S. J. Phys. Chem. B 1999, 103, 5122.
24. Oesterhelt, D.; Stoeckeneus, W. Proc. Natl. Acad. Sci. U.S.A. 1973, 70, 2853.
25. Ujj, L.; Jager, F.; Atkinson, G. H. Biophys. J. 1998, 74, 1492.
26. Ujj, L.; Atkinson, G. H. Coherent Anti-Stokes Raman Spectroscopy. In Handbook of Vibrational Spectroscopy; Chalmers, J. M., Griffiths, P. R., Eds.; John Wiley and Sons Ltd.: Chichester, 2002; Vol. 1, p 585.
27. Ujj, L.; Volodin, B. L.; Popp, A.; Delaney, J. K.; Atkinson, G. H. Chem. Phys. 1994, 182, 291.
28. Ujj, L.; Jager, F.; Popp, A.; Atkinson, G. H. Chem. Phys. 1996, 212, 421.
29. Smith, S. O. Resonance Raman Studies on the Mechanism of Proton Translocation by Bacteriorhodopsin's Retinal Chromophore, Ph.D. Thesis, University of California, 1985.
30. Smith, S.; Braiman, M. S.; Myers, A. B.; Pardoen, J. A.; Courtin, J. M. L.; Winkel, C.; Lugtenburg, J.; Mathies, R. A. J. Am. Chem. Soc. 1987, 109, 3108.
31. Smith, S.; Pardoen, J. A.; Lugtenburg, J.; Mathies, R. A. J. Phys. Chem. 1987, 91, 804.
32. Mathies, R. A.; Smith, S. O.; Palings, I. Determination of Retinal Chromophore Structure in Rhodopsins. In Biological Applications of Raman Spectroscopy; Spiro, T. G., Ed.; John Wiley and Sons: New York, 1987; Vol. 2; p. 59.
33. Luecke, H.; Schobert, B.; Richter, H. T.; Cartailler, J. P.; Lanyi, J. K. J. Mol. Biol. 1999, 291, 899.
34. Luecke, H.; Richter, H. T.; Lanyi, J. K. Science 1998, 280, 1934.
35. Gai, F.; Hasson, K. C.; McDonald, J. C.; Anfinrud, P. A. Science 1998, 279, 1886.
36. Hasson, K. C.; Gai, F.; Anfinrud, P. A. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 15124.
37. Orlandi, G.; Zerbetto, F.; Zgierski, M. Z. Chem. Rev. 1991, 91, 867.
38. Herbst, J.; Heyne, K.; Diller, R. Science 2002, 297, 822.
39. Kobayashi, T.; Saito, T.; Ohtani, H. Nature 2001, 414, 531.
40. Atkinson, G. H.; Blanchard, D.; Lemaire, H.; Brack, T. L.; Hayashi, H. Biophys. J. 1989, 55, 263.
41. Blanchard, D.; Gilmore, D. A.; Brack, T. L.; Lemaire, H.; Hughes, D.; Atkinson, G. H. Chem. Phys. 1991, 154, 155.