Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins

Nucleic Acids Research

Volumn 31, Issue 1, 2003, Pages 216-218

  Weng, Shuai ^a   Dong, Qing ^a   Balakrishnan, Rama ^a   Christie, Karen ^a   Costanzo, Maria ^a   Dolinski, Kara ^a   Dwight, Selina S ^a   Engel, Stacia ^a   Fisk, Dianna G ^a   Hong, Eurie ^a   Issel Tarver, Laurie ^a   Sethuraman, Anand ^a   Theesfeld, Chandra ^a   Andrada, Rey ^a   Binkley, Gail ^a   Lane, Christopher ^a   Schroeder, Mark ^a   Botstein, David ^a   Cherry, J Michael ^a  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL PROTEIN;

ACCESS TO INFORMATION; BUDDING; FUNGAL GENETICS; GENE SEQUENCE; GENETIC DATABASE; INFORMATION PROCESSING; MOLECULAR WEIGHT; NONHUMAN; OPEN READING FRAME; PREDICTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FUNCTION; PROTEIN MOTIF; REVIEW; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES GENOME DATABASE; SCORING SYSTEM; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY;

AMINO ACID MOTIFS; DATABASES, PROTEIN; GENOME, FUNGAL; MODELS, MOLECULAR; MOLECULAR WEIGHT; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SACCHAROMYCETALES; SEQUENCE HOMOLOGY, AMINO ACID;

SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; SACCHAROMYCETALES;

EID: 0037249630     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg054     Document Type: Review

References (7)

1. Ashburner,M., Ball,C.A., Blake,J.A., Botstein,D., Butler,H., Cherry,J.M., Davis,A.P., Dolinski,K., Dwight,S.S., Eppig,J.T., Harris,M.A., Hill,D.P., Issel-Tarver,L., Kasarskis,A., Lewis,S., Matese,J.C., Richardson,J.E., Ringwald,M., Rubin,G.M. and Sherlock,G. (2000) Gene ontology: tool for the unification of biology. Nature Genet., 25, 25-29.
2. Ball,C.A., Dolinski,K., Dwight,S.S., Harris,M.A., Issel-Tarver,L., Kasarskis,A., Scafe,C.R., Sherlock,G., Binkley,G., Jin,H., Kaloper,M., Orr,S.D., Schroeder,M., Weng,S., Zhu,Y., Botstein,D. and Cherry,J.M. (2000) Integrating functional genomic information into the Saccharomyces genome database. Nucleic Acids Res., 28, 77-80.
3. Dwight,S.S., Harris,M.A., Dolinski,K., Ball,C.A., Binkley,G., Christie,K.R., Fisk,D.G., Issel-Tarver,L., Schroeder,M., Sherlock,G., Sethuraman,A., Weng,S., Botstein,D. and Cherry,J.M. (2002) Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO). Nucleic Acids Res., 30, 69-72.
4. Huang,J.Y., and Brutlag,D.L. (2001) The EMOTIF database. Nucleic Acids Res., 29, 202-204.
5. Sharp,P.M. and Li,W.H. (1987) The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res., 15, 1281-1295.
6. Smith,T.F. and Waterman,M.S. (1981) Identification of common molecular subsequences. J. Mol. Biol., 147, 195-197.
7. Westbrook,J., Feng,Z., Jain,S., Bhat,T.N., Thanki,N., Ravichandran,V., Gilliland,G.L., Bluhm,W., Weissig,H., Greer,D.S., Bourne,P.E. and Berman,H.M. (2002) The Protein Data Bank: unifying the archive. Nucleic Acids Res., 30, 245-248.