Protein kinase A phosphorylation characterized by tandem Fourier transform ion cyclotron resonance mass spectrometry

Proteomics

Volumn 4, Issue 4, 2004, Pages 970-981

  Chalmers, Michael J ^a   Håkansson, Kristina ^a   Johnson, Robert ^c   Smith, Richard ^c   Shen, Jianwei ^c   Emmett, Mark R ^a,b   Marshall, Alan G ^a,b  

^a FLORIDA STATE UNIVERSITY   (United States)

^b FLORIDA STATE UNIVERSITY   (United States)

^c ABBOTT LABORATORIES   (United States)

Author keywords

Electron capture dissociation; Electrospray ionization; Fourier transform ion cyclotron resonance mass spectrometry; Infrared multiphoton dissociation; Phosphorylation; Protein kinase A

Indexed keywords

CYCLIC AMP DEPENDENT PROTEIN KINASE; PHOSPHOPEPTIDE;

ANALYTIC METHOD; ARTICLE; ELECTRON CAPTURE DETECTION; ENZYME PHOSPHORYLATION; FOURIER TRANSFORMATION; ION CYCLOTRON RESONANCE MASS SPECTROMETRY; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; TANDEM MASS SPECTROMETRY;

AMINO ACID SEQUENCE; ANIMALS; CATTLE; CYCLIC AMP-DEPENDENT PROTEIN KINASES; CYCLOTRONS; FOURIER ANALYSIS; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PEPTIDES; PHOSPHORYLATION; TRYPSIN;

EID: 0346972657     PISSN: 16159853     EISSN: None     Source Type: Journal    
DOI: 10.1002/pmic.200300650     Document Type: Article

References (74)

1. Whitehouse, C. M., Dreyer, R. N., Yamashita, M., Fenn, J. B., Anal. Chem. 1985, 57, 675-679.
2. Wilm, M., Mann, M., Anal. Chem. 1996, 68, 1-8.
3. Emmett, M. R., Caprioli, R. M., J. Am. Soc. Mass Spectrom. 1994, 5, 605-613.
4. Karas, M., Bachmann, D., Hillenkamp, F., Anal. Chem. 1985, 57, 2935-2939.
5. Karas, M., Hillenkamp, F., Anal. Chem. 1988, 60, 2299-2301.
6. Tanaka, K., Waki, H., Ido, Y., Akita, S., et al., Rapid Commun. Mass Spectrom. 1988, 2, 151-153.
7. Poulter, L., Ang, S. G., Gibson, B. W., Williams, D. H. et al., Eur. J. Biochem. 1988, 175, 497-510.
8. Cohen, P., Gibson, B. W., Holmes, C. F. B., Methods Enzymol. 1991, 201, 153-168.
9. Gibson, B. W., Cohen, P., Methods Enzymol. 1990, 193, 480-501.
10. Zhang, X. L., Herring, C. J., Romano, P. R., Szczepanowska, J. et al., Anal. Chem. 1998, 70, 2050-2059.
11. Kuster, B., Krogh, T. N., Mortz, E., Harvey, D. J., Proteomics 2001, 1, 350-361.
12. Neubauer, G., Mann, M., Anal. Chem. 1999, 71, 235-242.
13. McLachlin, D. T., Chalt, B. T., Curr. Opin. Chem. Biol. 2001, 5, 591-602.
14. Hakansson, K., Cooper, H. J., Emmett, M. R., Costello, C. E. et al., Anal. Chem. 2001, 73, 4530-4536.
15. Mann, M., Ong, S. E., Gronborg, M., Steen, H. et al., Trends Biotechnol. 2002, 20, 261-268.
16. Blume-Jensen, P., Hunter, T., Nature 2001, 411, 355-365.
17. Manning, G., Whyte, D. B., Martinez, R., Hunter, T., Sudarsanam, S., Science 2002, 298, 1912-1934.
18. Griffioen, G., Thevelein, J. M., Curr. Genet. 2002, 41, 199-207.
19. Yonemoto, W., Garrod, S. M., Bell, S. M., Taylor, S. S., J. Biol. Chem. 1993, 268, 18626-18632.
20. Tonerwebb, J., Vanpatten, S. M., Walsh, D. A., Taylor, S. S., J. Biol. Chem. 1992, 267, 25174-25180.
21. Shoji, S., Titani, K., Demallie, J. G., Fischer, E. H., J. Biol. Chem. 1979, 254, 6211-6214.
22. Zhang, W. Z., Czernik, A. J., Yungwirth, T., Aebersold, R., Chait, B. T., Protein Sci. 1994, 3, 677-686.
23. Carr, S. A., Huddleston, M. J., Annan, R. S., Anal. Biochem. 1996, 239, 180-192.
24. Wilm, M., Neubauer, G., Mann, M., Anal. Chem. 1996, 68, 527-533.
25. Steen, H., Mann, M., J. Am. Soc. Mass Spectrom. 2002, 13, 996-1003.
26. Steen, H., Kuster, B., Fernandez, M., Pandey, A., Mann, M., Anal. Chem. 2001, 73, 1440-1448.
27. Schlosser, A., Pipkorn, R., Bossemeyer, D., Lehmann, W. D., Anal. Chem. 2001, 73, 170-176.
28. Stensballe, A., Andersen, S., Jensen, O. N., Proteomics 2001, 1, 207-222.
29. Zhou, H. L., Watts, J. D., Aebersold, R., Nat. Biotechnol. 2001, 19, 375-378.
30. Goshe, M. B., Veenstra, T. D., Panisko, E. A., Conrads, T. P. et al., Anal. Chem. 2002, 74, 607-616.
31. Marshall, A. G., Hendrickson, C. L., Jackson, G. S., Mass Spectrom. Rev. 1998, 17, 1-35.
32. Chalmers, M. J., Quinn, J. P., Blakney, G. T., Emmett, M. R. et al., J. Prot. Res. 2003, 2, 373-382.
33. Flora, J. W., Muddiman, D. C., Anal. Chem. 2001, 73, 3305-3311.
34. Bateman, R. H., Carruthers, R., Hoyes, J. B., Jones, C. et al., J. Am. Soc. Mass Spectrom. 2002, 13, 792-803.
35. Annan, R. S., Carr, S. A., Anal. Chem. 1996, 68, 3413-3421.
36. Cao, P., Stults, J. T., Rapid Commun. Mass Spectrom. 2000, 14, 1600-1606.
37. Marshall, A. G., Int. J. Mass Spectrom. 2000, 200, 331-336.
38. Marshall, A. G., Hendrickson, C. L., Shi, S. D. H., Anal. Chem. 2002, 74, 253A-259A.
39. Gauthier, J. W., Trautman, T. R., Jacobson, D. B., Anal. Chim. Acta 1991, 246, 211-225.
40. Little, D. P., Speir, J. P., Senko, M. W., O'Cornnor, P. B., McLafferty, F. W., Anal. Chem. 1994, 66, 2809-2815.
41. Zubarev, R. A., Horn, D. M., Fridriksson, E. K., Kelleher, N. L. et al., Anal. Chem. 2000, 72, 563-573.
42. Zubarev, R. A., Kelleher, N. L., McLafferty, F. W., J. Am. Chem. Soc. 1998, 120, 3265-3266.
43. Kelleher, R. L., Zubarev, R. A., Bush, K., Furie, B. et al., Anal. Chem. 1999, 71, 4250-4253.
44. Stensballe, A., Jensen, O. N., Olsen, J. V., Haselmann, K. F., Zubarev, R. A., Rapid Commun. Mass Spectrom. 2000, 14, 1793-1800.
45. Shi, S. D.-H., Hemling, J. E., Carr, S. A., Horn, D. M. et al., Anal. Chem. 2001, 73, 19-22.
46. Mirgorodskaya, E., Roepstorff, P., Zubarev, R., Anal. Chem. 1999, 71, 4431-4436.
47. Hakansson, K., Chalmers, M. J., Quinn, J. P., McFarland, M. A. et al., Anal. Chem. 2003, 75, 3256-3262.
48. th ASMS Conf. Mass Spectrom. Allied Topics 2000, Long Beach, CA.
49. Belov, M. E., Nikolaev, E. N., Anderson, G. A., Udseth, H. R. et al., Anal. Chem. 2001, 73, 253-261.
50. Shen, J., Smith, R. A., Stoll, V. S., Edalji, R. et al., Anal. Biochem. 2004, 2, 204-218.
51. Senko, M. W., Canterbury, J. D., Guan, S., Marshall, A. G., Rapid Commun. Mass Spectrom. 1996, 10, 1839-1844.
52. Chowdhury, S. K., Katta, V., Chait, B. T., Rapid Commun. Mass Spectrom. 1990, 4, 81-87.
53. Senko, M. W., Hendrickson, C. L., Emmett, M. R., Shi, S. D.-H., Marshall, A. G., J. Am. Soc. Mass Spectrom. 1997, 8, 970-976.
54. Wilcox, B. E., Hendrickson, C. L., Marshall, A. G., J. Am. Soc. Mass Spectrom. 2002, 13, 1304-1312.
55. Hannis, J. C., Muddiman, D. C., J. Am. Soc. Mas Spectrom. 2000, 11, 876-883.
56. Comisarow, M. B., Marshall, A. G., Chem. Phys. Lett. 1974, 26, 489-490.
57. Marshall, A. G., Roe, D. C., J. Chem. Phys. 1980, 73, 1581-1590.
58. Marshall, A. G., Verdun, F. R., Fourier Transforms in NMR, Optical, and Mass Spectrometry: A User's Handbook, 1990, Amsterdam, Elsevier 1990, pp. 17-83.
59. Ledford, E. B. Jr., Rempel, D. L., Gross, M. L., Anal. Chem. 1984, 56, 2744-2748.
60. Shi, S. D.-H., Drader, J. J., Freitas, M. A., Hendrickson, C. L., Marshall, A. G., Int. J. Mass Spectrom. 2000, 195/196, 591-598.
61. Guan, S., Marshall, A. G., Int. J. Mass Spectrom. Ion Processes 1996, 157/158, 5-37.
62. Marshall, A. G., Wang, T.-C. L., Ricca, T. L., J. Am. Chem. Soc. 1965, 107, 7693-7697.
63. Wetterhall, M., Palmblad, M., Hakansson, P., Markides, K. E., Bergq uist, J., J. Protein Res. 2002, 1, 361-366.
64. Bergquist, J., Palmblad, M., Wetterhall, M., Hakansson, P., Markides, K. E., Mass Spectrom. Rev. 2002, 21, 2-15.
65. Yonemoto, W., Garrod, S., Bell, S., Taylor, S., J. Biol. Chem. 1993, 268, 18626-18632.
66. Belov, M. E., Nikolaev, E. N., Anderson, G. A., Auberry, K. J. et al., J. Am. Soc. Mass Spectrom. 2001, 12, 38-48.
67. th ASMS Conf. Mass Spectrom. Allied Topics 2001, Chicago.
68. th North American FT-ICR MS Conf. 2003, Marshall, CA.
69. st ASMS Conf. Mass Spectrom. Allied Topics, 2003, Montreal, Canada.
70. Cooper, H. J., Hudgins, R. R., Hakansson, K., Marshall, A. G., J. Am. Soc. Mass Spectrom. 2002, 13, 241-249.
71. Horn, D. M., Ge, Y., McLafferty, F. W., Anal. Chem. 2000, 72, 4778-4784.
72. Haselmann, K. F., Budnik, B. A., Olsen, J. V., Nielsen, M. L. et al., Anal. Chem. 2001, 73, 2998-3005.
73. Leymarie, N., Berg, E. A., McComb, M. E., O'Cornnor, P. B. et al., Anal. Chem. 2002, 74, 4124-4132.
74. Cooper, H. J., Hudgins, R. R., Hakansson, K., Marshall, A. G., Int. J. Mass Spectrom. 2003, 228, 723-728.