Some molecular characteristics of three viruses from SPVD-affected sweet potato plants in Egypt

Archives of Virology

Volumn 148, Issue 12, 2003, Pages 2449-2460

  IsHak, J A ^a,b   Kreuze, J F ^b   Johansson, A ^b   Mukasa, S B ^b,c   Tairo, F ^b,d   Abo El Abbas, F M ^a   Valkonen, J P T ^b,e  

^a Ain Shams University   (Egypt)

^b SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^c MAKERERE UNIVERSITY   (Uganda)

^d Mikocheni Agricultural Research Institute   (Tanzania)

^e UNIVERSITY OF HELSINKI   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

HEAT SHOCK PROTEIN 70;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CLASSIFICATION; CRINIVIRUS; GENETICS; MOLECULAR GENETICS; PHYLOGENY; POTYVIRUS; SEROTYPING; SWEET POTATO; VIROLOGY;

AMINO ACID SEQUENCE; CRINIVIRUS; HSP70 HEAT-SHOCK PROTEINS; IPOMOEA BATATAS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POTYVIRUS; SEROTYPING;

CLOSTEROVIRIDAE; CRINIVIRUS; IPOMOEA BATATAS; POTYVIRIDAE; POTYVIRUS; PROKARYOTA; SOLANUM TUBEROSUM; SWEET POTATO CHLOROTIC STUNT VIRUS; SWEET POTATO FEATHERY MOTTLE VIRUS; SWEET POTATO G VIRUS;

EID: 0346936028     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-003-0187-5     Document Type: Article

References (35)

1. Abad JA, Moyer JW (1992) Detection and distribution of sweet potato feathery mottle virus in sweet potato by in vitro-transcribed RNA probes (riboprobes), membrane immunobinding assay, and direct blotting. Phytopathology 82: 300-305
2. Abad JA, Conkling MA, Moyer JW (1992) Comparison of the capsid protein cistron from serologically distinct strains of sweetpotato feathery mottle virus (SPFMV). Arch Virol 126: 147-157
3. Alicai T, Fenby NS, Gibson RW, Adipala E, Vetten HJ, Foster GD, Seal SE (1999) Occurrence of two serotypes of sweet potato chlorotic stunt virus in East Africa and their associated differences in coat protein and HSP70 homologue gene sequences. Plant Pathol 48: 718-726
4. Cali BB, Moyer JW (1981) Purification, serology and particle morphology of two russet crack strains of sweet potato feathery mottle virus. Phytopathology 71: 302-305
5. Carey EE, Gibson RW, Fuentes S, Machmud M, Mwanga ROM, Turyamureeba G, Zhang L, Ma D, Abo El-Abbas F, El-Bedewy R, Salazar LF (1999) The causes and control of virus diseases of sweetpotato in developing countries: is sweetpotato virus disease the main problem? In: Impact on a Changing World, Program Report 1997-1998. The International Potato Center, Lima, Peru, pp 241-248
6. Chavi F, Robertson AI, Verduin BJM (1997) Survey and characterization of viruses in sweet potato from Zimbabwe. Plant Dis 81: 1115-1122
7. Colinet D, Kummert J, Lepoivre P (1994) The complete nucleotide sequences of the coat protein cistron and the 3′ non-coding region of a newly-identified potyvirus infecting sweetpotato, as compared to those of sweetpotato feathery mottle virus. Arch Virol 139: 327-336
8. Colinet D, Kummert J, Lepoivre P (1997) Evidence for the assignment of two strains of SPLV to the genus Potyvirus based on coat protein and 3′ non-coding region sequence data. Virus Res 49: 91-100
9. Colinet D, Nguyen M, Kummert J, Lepoivre P (1998) Differentiation among potyviruses infecting sweet potato based on genus and virus-specific reverse transcription polymerase chain reaction. Plant Dis 82: 223-229
10. FAO (2000) FAO Production Yearbook for 2000. Food and Agriculture Organization of the United Nations, Rome, Italy, pp 91-92
11. Gibbs A, Mackenzie A (1997) A primer pair for amplifying part of the genome of all potyvirids by RT-PCR. J Virol Methods 63: 9-16
12. Gibson RW, Mwanga ROM, Kasule S, Mpembe I, Carey EE (1997) Apparent absence of viruses in most symptomless field-grown sweet potato in Uganda. Ann Appl Biol 130: 481-490
13. Gibson RW, Mpembe I, Alicai T, Carey EE, Mwanga ROM, Seal SE, Vetten HF (1998) Symptoms, aetiology and serological analysis of sweet potato virus disease in Uganda. Plant Pathol 47: 95-102
14. Gutierrez DL, Fuentes S, Salazar LF (2003) Sweetpotato Virus Disease (SPVD): Distribution, Incidence, and Effect on Sweetpotato Yield in Peru. Plant Dis 87: 297-302
15. Hammond J, Jordan RL, Larsen RC, Moyer J (1992) Use of polyclonal antisera and monoclonal antibodies to examine serological relationships among three filamentous viruses of sweet potato. Phytopathology 82: 713-717
16. Hijmans RJ, Huaccho L, Zhang DP (2001) Global distribution of sweetpotato. In: Program Report 1999-2000, International Potato Center, Lima, Peru, pp 323-329
17. Hoyer U, Maiss E, Jelkmann W, Lesemann DE, Vetten HJ (1996) Identification of the coat protein gene of a sweet potato sunken vein closterovirus isolate from Kenya and evidence for a serological relationship among geographically diverse closterovirus isolates from sweet potato. Phytopathology 86: 744-750
18. Karyeija RF, Gibson RW, Valkonen JPT (1998) The significance of sweet potato feathery mottle virus in subsistence sweet potato production in Africa. Plant Dis 82: 4-15
19. Karyeija RF, Kreuze JF, Gibson RW, Valkonen JPT (2000) Synergistic interactions of a potyvirus and a phloem-limited crinivirus in sweet potato plants. Virology 269: 26-36
20. Karyeija RF, Kreuze JF, Gibson RW, Valkonen JPT (2000) Two serotypes of Sweetpotato feathery mottle virus in Uganda and their interaction with resistant sweetpotato cultivars. Phytopathology 90: 1250-1255
21. Kreuze JF (2002) Molecular studies on the sweet potato virus disease and its two causal agents. PhD thesis, Swedish University of Agricultural Sciences, Agraria 335, http://www.vbiol.slu.se/tema/stress/VirologyGroup/Janthesis.htm
22. Kreuze JF, Karyeija RF, Gibson RW, Valkonen JPT (2000) Comparisons of coat protein gene sequences show that East African isolates of Sweet potato feathery mottle virus form a genetically distinct group. Arch Virol 145: 567-574
23. Kreuze JF, Savenkov EI, Valkonen JPT (2002) Complete genome sequence and analyses of the subgenomic RNAs of Sweet potato chlorotic stunt virus reveal several new features for the genus Crinivirus. J Virol 76: 9260-9270
24. Mori M, Usugi T, Hayashi T, Nishiguchi M (1994) Nucleotide sequence at the 3′-terminal region of sweet potato feathery mottle virus (ordinary strain, SPFMV-O) RNA. Biosci Biotech Biochem 58: 965-967
25. Moyer JW, Salazar LF (1989) Viruses and viruslike diseases of sweet potato. Plant Dis 73:451-455
26. Mukasa SB, Rubaihayo PR, Valkonen JPT (2003) Incidence of viruses and virus-like diseases in sweetpotato in Uganda. Plant Dis, in press
27. Mukasa SB, Rubaihayo PR, Valkonen JPT (2003) Sequence variability within the 3′-proximal part of the Sweetpotato mild mottle virus genome. Arch Virol 148: 487-496
28. Ngeve JM, Bouwkamp JC (1991) Effect of sweet potato virus disease (SPVD) on the yield of sweet potato genotypes in Cameroon. Exp Agric 27: 221-225
29. Nolasco G, de Blas C, Torres V, Ponz F (1993) A method combining immunocapture and PCR amplification in a microtiter plate for the detection of plant viruses and subviral pathogens. J Virol Methods 45: 201-218
30. Sakai J, Mori M, Morishita T, Tanaka M, Hanada K, Usugi T, Nishiguchi M (1997) Complete nucleotide sequence and genome organization of sweet potato feathery mottle virus (S strain) genomic RNA: the large coding region of the P1 gene. Arch Virol 142: 1553-1562
31. Sambrook J, Russel T (2001) Molecular Cloning: A Laboratory Manual, 3rd edn. Cold Spring Harbor, New York, USA
32. Shukla DD, Ward CW, Brunt AA (1994) The Potyviridae. CAB International, Littlehampton, UK
33. Van Regenmortel MHV, Fauquet CM, Bishop DHL, Carstens EB, Estes MK, Lemon SM, Maniloff J, Mayo MA, McGeoch DJ, Pringle CR, Wickner RB (2000) Virus Taxonomy. Seventh Report of the International Committee on Taxonomy of Viruses. Academic Press, London, UK
34. Vetten HJ, Hoyer U, Maiss E, Lesemann DE, Jelkmann W (1996) Serological detection and discrimination of geographically diverse isolates of sweet potato sunken vein closterovirus. Phytopathology 11(Suppl): 100 (abstract)
35. th International Symposium of the EFPP, Bonn, Germany, August 9-12, 1996. Kluwer Academic Publishers, Dordrecht, pp 473-475