Identification of the coat protein gene of a sweet potato sunken vein closterovirus isolate from Kenya and evidence for a serological relationship among geographically diverse closterovirus isolates from sweet potato

Phytopathology

Volumn 86, Issue 7, 1996, Pages 744-750

  Hoyer, Ute ^a   Maiss, Edgar ^b   Jelkmann, Wilhelm ^a   Lesemann, Dietrich E ^a   Vetten, H Josef ^a  

^a INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^b LEIBNIZ UNIVERSITY HANNOVER   (Germany)

Author keywords

coat protein expression; dsRNA

Indexed keywords

EID: 0029785798     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/Phyto-86-744     Document Type: Article

References (35)

1. Abad, J. A., French, R. D., and Moyer, J. W 1992. Double stranded (DS) RNA analysis of the white-fly component of the sweetpotato virus disease (SPVD-WF) of sweetpotato. (Abstr.) Phytopathology 82:1070.
2. Agranovsky, A. A., Boyko, V. P., Karasev, A. V., Lunina, N. A., Koonin, E. V., and Dolja, V. V. 1991. Nucleotide sequence of the 3′-terminal half of the beet yellows closterovirus RNA genome. Unique arrangement of eight virus genes. J. Gen. Virol 72:15-23.
3. Agranovsky, A. A., Koenig, R., Maiss, E., Boyko, V P., Casper, R., and Atabekov, J. G. 1994. Expression of the beet yellows closterovirus capsid protein and p24, a capsid protein homologue, in vitro and in vivo. J. Gen. Virol. 75:1431-1439.
4. Agranovsky, A. A., Koonin, E. V., Boyko, V. P., Maiss, E., Frötschl, R., Lunina, N. A., and Atabekov, J. G. 1994. Beet yellows closterovirus: Complete genome structure and identification of a leader papain-like thiol protease. Virology 198:311-324.
5. Agranovsky, A. A., Lesemann, D.-E., Maiss, E., Hull, R., and Atabekov, J. G. 1995. "Rattlesnake" structure of a filamentous plant RNA virus built of two capsid proteins. Proc. Natl. Acad. Sci. USA 92:2470-2473.
6. Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
7. Bar-Joseph, M., and Lee, R. F. 1989. Citrus tristeza virus. CMI/AAB Descriptions of Plant Viruses, No. 383. Commonwealth Mycological Institute and the Association of Applied Biologists, Kew, Surrey, England.
8. Bar-Joseph, M., and Murant, A. F. 1982. Closterovirus group. CMI/AAB Descriptions of Plant Viruses, No. 260. Commonwealth Mycological Institute and the Association of Applied Biologists, Kew, Surrey, England.
9. Boyko, V. P., Karasev, A. V., Agranovsky, A. A., Koonin, E. V., and Dolja, V. V. 1992. Coat protein gene duplication in a filamentous RNA virus of plants. Proc. Natl. Acad. Sci. USA 89:9156-9160.
10. Candresse, T., and Martetli, G. P. 1995. Genus Closterovirus. Pages 461-464 in: Virus Taxonomy. F. A. Murphy, C. M. Fauquet, D. H. L. Bishop, S. A. Ghabrial, A W. Jarvis, G. P. Martelli, M. A. Mayo, and M. D. Summers. 6th Report of the International Committee on Taxonomy of Viruses. Arch. Virol. Suppl. 10.
11. Cohen, J., Franck, A., Vetten, H. J., Lesemann, D. E, and Loebenstein, G. 1992. Purification and properties of closterovirus-like particles associated with a whitefly-transmitted disease of sweet potato. Ann. Appl. Biol. 121:257-268.
12. Devereux, J., Haeberli, P., and Smithies, O. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387-395.
13. Dolja, V. V., Boyko, V. P., Agranovsky, A. A., and Koonin, E. V. 1991. Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: Two families with distinct patterns of sequence and probably structure conservation. Virology 184:79-86.
14. Dolja, V. V., Karasev, A. V., and Koonin, E. V. 1994. Molecular biology and evolution of closteroviruses: Sophisticated build-up of large RNA genomes. Annu. Rev. Phytopathol. 32:261-285.
15. Duffus, J. E., Larsen, R. C., and Liu, H. Y. 1986. Lettuce infectious yellows virus - A new type of whitefly-transmitted virus. Phytopathology 76:97-100
16. Higgins, D. G., and Sharp, P. M. 1988. CLUSTAL: A package for performing multiple sequence alignment on a microcomputer. Gene 73:237-244.
17. Jelkmann, W., Martin, R. R., and Maiss, E. 1989. Cloning of four plant viruses from small quantities of double-stranded RNA. Phytopathology 79:1250-1253.
18. Karasev, A. V., Boyko, V. P., Gowda, S., Nikolaeva, O. V., Hilf, M. E., Koonin, E. V., Niblett, C. L., Cline, K., Gumpf, D. J., Lee, R. F., Garnsey, S. M., Lewandowski, D. J., and Dawson, W. O. 1995. Complete sequence of the citrus tristeza virus RNA genome. Virology 208:511-520.
19. Klaassen, V. A., Boeshore, M., Dolja, V. V. and Falk, B. W. 1994. Partial characterization of the lettuce infectious yellows virus genomic RNAs, identification of the coat protein gene, and comparison of its amino acid sequence with those of other filamentous RNA plant viruses. J. Gen. Virol. 75:1525-1533
20. Klaassen, V. A., Boeshore, M. L., Koonin, E. V., Tian, T., and Falk, B. W. 1995. Genome structure and phylogenetic analysis of lettuce infectious yellows virus, a whitefly-transmitted, bipartite closterovirus. Virology 208:99-110.
21. Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (Lond.) 227:680-685.
22. Larsen, R. C., Laakso, M., and Moyer, J. W. 1991. Isolation and vector relations of a whitefly-transmitted component of the sweet potato virus disease (SPVD) complex from Nigeria. (Abstr.) Phytopathology 81: 1157.
23. Milne, R. G. 1984 Electron microscopy for the identification of plant viruses in in vitro preparations. Methods Virol. 7:87-120.
24. Milne, R. G., and Lesemann, D.-E. 1984. Immunosorbent electron microscopy in plant virus studies. Methods Virol. 8:85-101.
25. Morris, T. J., and Dodds, J. A. 1979. Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69:854-858.
26. Moyer, J W., and Salazar, L. F. 1989. Viruses and viruslike diseases of sweet potato. Plant Dis. 73:451-455.
27. Pappu, H. R., Karasev, A. V., Anderson, E. J., Pappu, S S., Hilf, M E., Febres, V J., Eckloff, R M. G., McCaffery, M., Boyko, V., Gowda, S., Dolja, V. V., Koonin, E. V., Gumpf, D. J., Cline, K. C., Gamsey, S M., Dawson, W. O., Lee, R F., and Niblett, C. L. 1994. Nucleotide sequence and organization of eight 3′ open reading frames of the citrus tristeza closterovirus genome. Virology 199:35-46.
28. Pio-Ribeiro, G., Winter, S., Hamilton, R. I., de Assis Filho, F. M., and da Paz, C. D. 1994. First report of sweet potato virus disease-associated closterovirus in Brazil. Plant Dis. 78:1122.
29. Rossel, H. W., and Thottappilly, G. 1985. Sweet potato. Pages 10-13 in: Virus Diseases of Important Food Crops in Tropical Africa. International Institute of Tropical Agriculture, Ibadan, Nigeria.
30. Sambrook, J., Fritsch, E. F., and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual. 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
31. Sanger, F., Hicklen, S., and Coulson, A. R. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA. 74:5463-5467.
32. Schaefers, G. A., and Terry, E. R. 1976. Insect transmission of sweet potato disease agents in Nigeria. Phytopathology 66:642-645.
33. Sekiya, M. E., Lawrence, S. D., McCaffery, M., and Cline, K. 1991 Molecular cloning and nucleotide sequencing of the coat protein gene of citrus tristeza virus. J. Gen. Virol. 72:1013-1020.
34. Towbin, H., Staehelin, T., and Gordon, J. 1979. Electrophoretic transfer of proteins from polyacrylaraide gels to nitrocellulose sheets: Procedure and some applications. Proc. Natl. Acad. Sci. USA 76:4350-4354.
35. Winter, S., Purac, A., Leggett, F., Frison, E. A., Rossel, H. W., and Hamilton, R. I. 1992. Partial characterization and molecular cloning of a closterovirus from sweet potato infected with the sweet potato virus disease complex from Nigeria. Phytopathology 82:869-875.