Viriobenthos Production and Virioplankton Sorptive Scavenging by Suspended Sediment Particles in Coastal and Pelagic Waters

Microbial Ecology

Volumn 46, Issue 3, 2003, Pages 337-347

  Hewson, I ^a   Fuhrman, J A ^a  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BENTHOS; BIOLOGICAL PRODUCTION; PLANKTON; SCAVENGING (FEEDING); SUSPENDED SEDIMENT; VIRUS;

ADSORPTION; BACTERIA; CALIFORNIA; CARBON; GEOLOGIC SEDIMENTS; PARTICLE SIZE; PLANKTON; POPULATION DYNAMICS; SURVIVAL ANALYSIS; VIRUSES; WATER MICROBIOLOGY;

CALIFORNIA; NORTH AMERICA; PACIFIC OCEAN; UNITED STATES;

EID: 0346816541     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-002-1041-0     Document Type: Article

References (47)

1. Berelson WM (1991) The flushing of 2 deep-sea basins, Southern California Borderland. Limnol Oceanogr 36:1150-1166
2. Bird DF, Juniper SK, RicciardiRigault M, Martineu P, Prairie YT, Calvert SE (2001) Subsurface viruses and bacteria in Holocene/Late Pleistocene sediments of Saanich Inlet, BC: ODP Holes 1033B and 1034B, Leg 169S. Mar Geol 174:227-239
3. Blackburn TH, Blackburn ND (1993) Coupling of cycles and global significance of sediment diagenesis. Mar Geol 113: 101-110
4. Bratbak G, Heldal M, Thingstad TF, Reimann B, Haslund OH (1992) Incorporation of viruses into the budget of microbial C-transfer. A first approach. Mar Ecol Prog Ser 83: 273-280
5. Cammen LM (1991) Annual bacterial production in relation to benthic microalgal produiction and sediment oxygen uptake in an intertidal sandflat and an intertidal mudflat. Mar Ecol Prog Ser 71:13-25
6. Collier R, Dymond J, Honjo S, Manganini S, Francois R, Dunbar R (2000) The vertical flux of biogenic and lithogenic material in the Ross Sea: Moored sediment trap observations 1996-1998. Deep Sea Res Part II - Top Studies Oceanogr 47:3491-3520
7. Danovaro R, Dellánno A, Trucco A, Serresi M, Vanucci S (2001) Determination of virus abundance in marine sediments. Appl Environ Microbiol 67:1384-1387
8. Danovaro R, Serresi M (2000) Viral density and virus-to-bacterium ratio in deep-sea sediments of the eastern Mediterranean. App Environ Microbiol 66:1857-1861
9. Drake LA, Choi KH, Haskell AGE, Dobbs FC (1998) Vertical profiles of virus-like particles and bacteria in the water column and sediments of Chesapeake Bay, USA. Aqua Microb Ecol 16:17-25
10. Fischer UR, Velimirov B (2000) High control of bacterial production by viruses in a eutrophic oxbow lake. Aquat Microb Ecol 27:1-12
11. Flood JA, Ashbolt NJ (1999) Virus-sized particles can be entrapped and concentrated one hundred fold within wetland biofilms. Adv Environ Res 3:403-411
12. Fuhrman JA (1999) Marine viruses and their biogeochemical and ecological effects. Nature 399:541-548
13. Fuhrman JA, Noble RT (1995) Viruses and protists cause similar bacterial mortality in coastal seawater. Limnol Oceanogr 40:1236-1242
14. Gorsline DS (1992) The geological setting of Santa Monica and San Pedro Basins, California Continental Borderland. Prog Oceanogr 30:1-36
15. Greibler C, Mindl B, Slezak D (2001) Combining DAPI and SYBR Green II for the enumeration of total bacterial numbers in aquatic sediments. Int Rev Hydrobiol 86:453-465
16. Gundersen K, Bratbak G, Heldal M (1996) Factors influencing the loss of bacteria in preserved seawater samples. Mar Ecol Prog Ser 137:305-310
17. Hansen JA, Alongi DM (1991) Bacterial productivity and benthic standing stocks in a tropical coastal embayment. Mar Ecol Prog Ser 68:301-310
18. Heldal M, Bratbak G (1991) Production and decay of viruses in aquatic environments. Mar Ecol Prog Ser 72:205-212
19. Hewson I, O'Neil JM, Fuhrman JA, Dennison WC (2001) Virus-like particle distribution and abundance in sediments and overlying waters along eutrophication gradients in two subtropical estuaries. Limnol Oceanogr 47:1734-1746
20. Hewson I, O'Neil JM, Heil CA, Bratbak G, Dennison WC (2001) Effects of concentrated natural viral communities on photosynthesis and community composition of co-occuring benthic microalgae and phytoplankton. Aquat Microb Ecol 25:1-10
21. Hickey BM (1992) Circulation over the Santa Monica San Pedro Basin and shelf. Prog Oceanogr 30:37-115
22. Jiang SC, Paul JH (1994) Seasonal and diel abundance of viruses and occurrence of lysogeny/bacteriocinogeny in the marine environment. Mar Ecol Prog Ser 104:163-172
23. Kieppel GS (1992) Environmental regulation of feeding and egg production by Acartia tonsa off Southern California. Mar Biol 112:57-65
24. Lawrence JE, Chan AM, Suttle CA (2002) Viruses causing lysis of the toxic bloom-forming alga Heterosigma akashiwo (Raphidophyceae) are widespread in coastal sediments of British Columbia, Canada. Limnol Oceanogr 47:545-550
25. Lee S, Fuhrman JA (1987) Relationships between biovolume and biomass of naturally derived marine bacterioplankton. Appl Environ Microbiol 53:1298-1303
26. Maranger P, Bird DF (1996) High concentrations of viruses in the sediments of Lake Gilbert, Quebec. Microb Ecol 31:141-151
27. Noble RT, Fuhrman JA (2000) Rapid virus production and removal measured with fluorescently labeled viruses as tracers. Appl Environ Microbiol 66:3790-3797
28. Noble RT, Fuhrman JA (1998) Use of SYBR Green I rapid epifluorescence counts of marine viruses and bacteria. Aquat Microb Ecol 14:113-118
29. Noble RT, Fuhrman JA (1997) Virus decay and its causes in coastal waters. Appl Environ Microbiol 63:77-83
30. Norkko A, Hewitt JE, Thrush SF, Funnell GA (2001) Benthic-pelagic coupling and suspension-feeding bivalves: linking site-specific sediment flux and biodeposition to benthic community structure. Limnol Oceanogr 46:2067-2072
31. Paul JH, Rose JB, Jiang SC, Kellogg CA, Dickson L (1993) Distribution of viral abundance in the reef environment of Key Largo, Florida. Appl Environ Microbiol 59:718-724
32. Proctor LM, Fuhrman JA (1992) Mortality of marine bacteria response to enrichments of the virus size fraction from seawater. Mar Ecol Prog Ser 87:283-293
33. Proctor LM, Fuhrman JA (1990) Viral mortality of marine bacteria and cyanobacteria. Nature 343:60-61
34. Proctor LM, Okubo A, Fuhrman JA (1993) Calibrating estimates of phage-induced mortality in marine bacteria: Ultrastructural studies of marine bacteriophage development from one-step growth experiments. Microb Ecol 25:161-182
35. Roden EE, Tuttle JH, Boyton WR, Kemp WM (1995) Carbon cycling in mesohaline Chesapeake Bay sediments. 1. POC deposition rates and mineralization pathways. J Mar Res 53:799-819
36. Simek K, Pernthaler J, Weinbauer MG, Hornák K, Dolan JR, Nedoma J, Masín M, Amann R (2001) Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Appl Environ Microbiol 67:2723-2733
37. Sternberg RW, Berhane I, Ogston AS (1999) Measurement of size and settling velocity of suspended aggregates on the northern California continental shelf. Mar Geol 154:43-53
38. Steward GF, Smith DC, Azam F (1996) Abundance and production of bacteria and viruses in the Bering and Chukchi Sea. Mar Ecol Prog Ser 131:287-300
39. Steward GF, Wikner J, Cochlan WP, Smith DC, Azam F (1992) Estimation of virus production in the sea, II: Field results. Mar Microb Food Webs 6:79-90
40. Suttle CA (2000) Cyanophages and their role in the ecology of cyanobacteria, p. 563-589. In: Potts M (Ed.) The Ecology of Cyanobacteria, vol. 1. Kluwer Academic, Amsterdam
41. Suttle CA (1994) The significance of viruses to mortality in aquatic microbial communities. Microb Ecol 28:237-243
42. Thingstad TF, Heldal M, Bratbak G, Dundas I (1993) Are viruses important partners in pelagic food webs? Trends Evolutionary Ecol 8:209-213
43. vanDuyl FC, Bak RPM, Kop AJ, Nieuwland G, Berghuis EM, Kok A (1992) Mesocosm experiments mimicking seasonal developments of microbial variables in North Sea sediments. Hydrobiologia 235:267-281
44. vanDuyl FC, deWinder B, Kop AJ, Wollenzein U (1999) Tidal coupling between carbohydrate concentrations and bacterial activities in diatom-inhabited intertidal mudflats. Mar Ecol Prog Ser 191:19-32
45. Weinbauer MG, Peduzzi P (1995) Significance of viruses versus heterotrophic nanoflagellates for controlling bacterial abundance in the northern Adriatic Sea. J Plankton Res 17:1851-1856
46. Wilhelm SW, Bridgen SM, Suttle CA (2002) A dilution technique for the direct measurement of viral production: A comparison in stratified and tidally mixed coastal waters. Microb Ecol 43:168-173
47. Wommack KE, Colwell RR (2000) Virioplankton: Viruses in aquatic ecosystems. Microbiol Mol Biol Rev 64:69-114