Solvation Dynamics in the Molten Globule State of a Protein

Journal of Physical Chemistry B

Volumn 107, Issue 51, 2003, Pages 14563-14568

  Sen, Pratik ^a   Mukherjee, Saptarshi ^a   Dutta, Partha ^a   Halder, Arnab ^a   Mandal, Debabrata ^a   Banerjee, Rajat ^b   Roy, Siddhartha ^b   Bhattacharyya, Kankan ^a  

^a DEPARTMENT OF MATERIALS SCIENCE   (India)

^b BOSE INSTITUTE   (India)

Author keywords

[No Author keywords available]

Indexed keywords

AROMATIC COMPOUNDS; HYDRATION; HYDROPHILICITY; MACROMOLECULES; MOLECULAR DYNAMICS; MOLECULAR ORIENTATION; MOLECULAR STRUCTURE; PURIFICATION; WATER;

ISOLATION; SOLVATION DYNAMICS;

PROTEINS;

EID: 0346433928     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp036277d     Document Type: Article

References (54)

1. (a) Pal, S. K.; Peon, J.; Bagchi, B.; Zewail, A. H. J. Phys. Chem. B 2002, 106, 12376.
2. (b) Nandi, N.; Bhattacharyya, K.; Bagchi, B. Chem. Rev. 2000, 100, 2013.
3. (c) Bhattacharyya, K. Acc. Chem. Res. 2003, 36, 95.
4. Pal, S. K.; Peon, J.; Zewail, A. H. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 1763.
5. Peon, J.; Pal, S. K.; Zewail, A. H. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 10964.
6. Toptygin, D.; Savichenko, R. S.; Meadow, N. D.; Brand, L. J. Phys. Chem. B 2001, 105, 2043.
7. Buzády, A.; Erostvák, J.; Somogyi, B. Biophys. Chem. 2001, 94, 75.
8. Buzády, A.; Savolainen, J.; Erostyák, J.; Myllyperkiö, P.; Somogyi, B.; Korppi-Tommola, J. J. Phys. Chem. B 2003, 107, 1208.
9. Mandal, D.; Sen, S.; Sukul, D.; Bhattacharyya, K.; Mandal, A. K.; Banerjee, R.; Roy, S. J. Phys. Chem. B 2002, 106, 10741.
10. Jordanides, X. J.; Lang, M. J.; Song, X.; Fleming, G. R. J. Phys. Chem. B 1999, 103, 7995.
11. Zhong, D.; Pal, S. K.; Zewail, A. H. ChemPhysChem 2001, 2, 219.
12. Pierce, D. W.; Boxer, S. G. J. Phys. Chem. 1992, 96, 5560.
13. Bashkin, J. S.; Mcledon, G.; Mukamel, S.; Marohn, J. J. Phys. Chem. 1990, 94, 4757.
14. Pal, S. K.; Mandal, D.; Sukul, D.; Sen, S.; Bhattacharyya, K. J. Phys. Chem. B 2001, 105, 1438.
15. (a) Jarzeba, W.; Walker, G. C.; Johnson, A. E.; Kahlow, M. A.; Barbara, P. F. J. Phys. Chem. 1988, 92, 7039.
16. (b) Jimenez, R.; Fleming, G. R.; Kumar, P. V.; Maroncelli, M. Nature 1994, 369, 471.
17. (c) Nandi, N.; Roy, S.; Bagchi, B. J. Chem. Phys. 1995, 102, 1390.
18. (a) Otting, G.; Liepinsh, E.; Wüthrich, K. Science 1991, 254, 974.
19. (b) Denisov, V. P.; Jonsson, B.-H.; Halle, B. Nature Srtuct. Biol. 1999, 6, 253.
20. (c) Marcji, M.; Sterpone, F.; Ceccaarelli, M. J. Am. Chem. Soc. 2002, 124, 6787.
21. (a) Pethig, R. In Protein Solvent Interactions; Gregory, R. B., Ed.; Marcel Dekker: New York, 1995; chapter 4.
22. (b) Grant, E. H.; Sheppard, R. J.; South, G. P. Dielectric Behavior of Biological Molecules; Oxford: Clarendon, 1978.
23. (c) Hushcha, T.; Peytcheva, A.; Kaatze, U. J. Phys.: Condens. Matter 2002, 14, 9461.
24. (a) Nandi, N.; Bagchi, B. J. Phys. Chem. B 1997, 101, 10954.
25. (b) Nandi, N.; Bagchi, B. J. Phys. Chem. A 1998, 102, 8217.
26. (a) Balasubramanian, S.; Pal, S.; Bagchi, B. Phys. Rev. Lett. 2002, 89, 115505.
27. (b) Pal, S.; Balasubramanian, S.; Bagchi, B. J. Phys. Chem. B 2003, 107, 5194.
28. (c) Bruce, C. D.; Senapati, S.; Berkowitz, M. L.; Perera, L.; Forbes, M. D. E. J. Phys. Chem. B 2002, 106, 10902.
29. (a) Senapati, S.; Berkowitz, M. L. J. Chem. Phys. 2003, 118, 1937.
30. (b) Faeder, J.; Albert, M. V.; Ladanyi, B. M. Langmuir 2003, 19, 2514.
31. (c) Senapati, S.; Chandra, A. J. Phys. Chem. B 2001, 105, 5106.
32. (d) Thompson, W. H. J. Chem. Phys. 2002, 117, 6618.
33. (a) Michael, D.; Benjamin, I. J. Chem. Phys. 2001, 114, 2817.
34. (b) Panatano, D. A.; Laria, D. J. Phys. Chem. B 2003, 107, 2971.
35. (a) Doi, M.; Edwards, S. F. The Theory of Polymer Dynamics, Clarendon: Oxford, 1986.
36. (b) Srinivas, G.; Sebastian, K. L.; Bagchi, B. J. Chem. Phys. 2002, 116, 7276.
37. Peon, J.; Pal, S. K.; Zewail, A. H. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 15297.
38. Dutta, P.; Sen, P.; Halder, A.; Mukherjee, S.; Sen, S.; Bhattacharyya, K. Chem. Phys. Lett. 2003, 377, 229.
39. (a) Shi, Z.; Olson, C. A.; Rose, G. D.; Baldwin, R. L.; Kallenbach, N. R. Proc. Natl Acad. Sci. U.S.A. 2002, 99, 9190.
40. (b) Shortle, D.; Ackerman, M. S. Science 2001, 293, 487.
41. (a) Arai, M.; Kuwajima, K. Adv. Protein Chem. 2000, 53, 209.
42. (b) Kuwajima, K.; Arai, M. The Molten Globule State: The Physical Picture and Biological Significances; Pain, R. H., Ed.; Oxford University Press: Oxford, 2000; p 138.
43. (c) Kuwajima, K. FASEB J. 1996, 1, 102.
44. (d) Bai, P.; Luo, L.; Peng, Z.; Biochemistry 2000, 39, 372.
45. Uversky, V. N.; Li, J.; Fink, A. L. J. Biol. Chem. 2001, 276, 10737.
46. Rould, M. A.; Perona, J. J.; Soll, D.; Steitz, T. A. Science 1989, 246, 1135.
47. (a) Bhattacharyya, T.; Roy, S. Biochemistry 1993, 32, 9268.
48. (b) Bhattacharyya, T.; Bhattacharyya, A.; Roy, S. Eur. J. Biochem. 1991, 200, 739.
49. Das, B. K.; Bhattacharyya, T.; Roy, S. Biochemistry 1995, 34, 5242.
50. Shi, L.; Palleros, D. R.; Fink, A. L. Biochemistry 1994, 33, 7536.
51. Maroncelli, M.; Fleming, G. R. J. Chem. Phys. 1987, 86, 6221.
52. Bhattacharyya, A.; Roy, S., unpublished.
53. (a) Johnson, J. D.; El-Bayoumi, M. A.; Weber, L. D.; Tulinsky, A. Biochemistry, 1979, 18, 1292.
54. (b) Weber, L. D.; Tulinsky, A.; Johnson, J. D.; El-Bayoumi, M. A. Biochemistry 1979, 18, 1297.