Hydrolysis of DNA by cerium(IV)/EDTA complex

Tetrahedron

Volumn 59, Issue 52, 2003, Pages 10403-10408

  Kitamura, Yoshihito ^a   Sumaoka, Jun ^a   Komiyama, Makoto ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

Cerium(IV); DNA; EDTA; Hydrolysis; Structure specificity

Indexed keywords

CERIUM; DOUBLE STRANDED DNA; EDETIC ACID; HYDROXIDE; OLIGONUCLEOTIDE; SINGLE STRANDED DNA;

ARTICLE; COMPLEX FORMATION; DNA STRAND; GEL; HYDROLYSIS; KINETICS; PRIORITY JOURNAL; STEREOCHEMISTRY;

EID: 0346158540     PISSN: 00404020     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tet.2003.06.005     Document Type: Article

References (32)

1. Reviews; (a) Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751-757 (b) Oivanen M., Kuusela S., Lönnberg H. Chem. Rev. 98:1998;961-990 (c) Trawick B.N., Daniher A.T., Bashkin J.K. Chem. Rev. 98:1998;939-960 (d) Pratviel G., Bernadou J., Meunier B. Sykes A.G. Advances in Inorganic Chemistry. Vol. 45:1998;251-312 Academic, San Diego, (e) Perreault D.M., Anslyn E.V. Angew. Chem., Int. Ed. Engl. 36:1997;432-450 (f) Chin J. Curr. Opin. Chem. Biol. 1:1997;514-521 (g) Kimura E., Koike T. Sykes A.G. Advances in Inorganic Chemistry. Vol. 44:1997;229-261 Academic, San Diego. and references cited therein.
2. Reviews; (a) Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751-757 (b) Oivanen M., Kuusela S., Lönnberg H. Chem. Rev. 98:1998;961-990 (c) Trawick B.N., Daniher A.T., Bashkin J.K. Chem. Rev. 98:1998;939-960 (d) Pratviel G., Bernadou J., Meunier B. Sykes A.G. Advances in Inorganic Chemistry. Vol. 45:1998;251-312 Academic, San Diego, (e) Perreault D.M., Anslyn E.V. Angew. Chem., Int. Ed. Engl. 36:1997;432-450 (f) Chin J. Curr. Opin. Chem. Biol. 1:1997;514-521 (g) Kimura E., Koike T. Sykes A.G. Advances in Inorganic Chemistry. Vol. 44:1997;229-261 Academic, San Diego. and references cited therein.
3. Reviews; (a) Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751-757 (b) Oivanen M., Kuusela S., Lönnberg H. Chem. Rev. 98:1998;961-990 (c) Trawick B.N., Daniher A.T., Bashkin J.K. Chem. Rev. 98:1998;939-960 (d) Pratviel G., Bernadou J., Meunier B. Sykes A.G. Advances in Inorganic Chemistry. Vol. 45:1998;251-312 Academic, San Diego, (e) Perreault D.M., Anslyn E.V. Angew. Chem., Int. Ed. Engl. 36:1997;432-450 (f) Chin J. Curr. Opin. Chem. Biol. 1:1997;514-521 (g) Kimura E., Koike T. Sykes A.G. Advances in Inorganic Chemistry. Vol. 44:1997;229-261 Academic, San Diego. and references cited therein.
4. Reviews; (a) Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751-757 (b) Oivanen M., Kuusela S., Lönnberg H. Chem. Rev. 98:1998;961-990 (c) Trawick B.N., Daniher A.T., Bashkin J.K. Chem. Rev. 98:1998;939-960 (d) Pratviel G., Bernadou J., Meunier B. Sykes A.G. Advances in Inorganic Chemistry. Vol. 45:1998;251-312 Academic, San Diego, (e) Perreault D.M., Anslyn E.V. Angew. Chem., Int. Ed. Engl. 36:1997;432-450 (f) Chin J. Curr. Opin. Chem. Biol. 1:1997;514-521 (g) Kimura E., Koike T. Sykes A.G. Advances in Inorganic Chemistry. Vol. 44:1997;229-261 Academic, San Diego. and references cited therein.
5. Reviews; (a) Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751-757 (b) Oivanen M., Kuusela S., Lönnberg H. Chem. Rev. 98:1998;961-990 (c) Trawick B.N., Daniher A.T., Bashkin J.K. Chem. Rev. 98:1998;939-960 (d) Pratviel G., Bernadou J., Meunier B. Sykes A.G. Advances in Inorganic Chemistry. Vol. 45:1998;251-312 Academic, San Diego, (e) Perreault D.M., Anslyn E.V. Angew. Chem., Int. Ed. Engl. 36:1997;432-450 (f) Chin J. Curr. Opin. Chem. Biol. 1:1997;514-521 (g) Kimura E., Koike T. Sykes A.G. Advances in Inorganic Chemistry. Vol. 44:1997;229-261 Academic, San Diego. and references cited therein.
6. Reviews; (a) Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751-757 (b) Oivanen M., Kuusela S., Lönnberg H. Chem. Rev. 98:1998;961-990 (c) Trawick B.N., Daniher A.T., Bashkin J.K. Chem. Rev. 98:1998;939-960 (d) Pratviel G., Bernadou J., Meunier B. Sykes A.G. Advances in Inorganic Chemistry. Vol. 45:1998;251-312 Academic, San Diego, (e) Perreault D.M., Anslyn E.V. Angew. Chem., Int. Ed. Engl. 36:1997;432-450 (f) Chin J. Curr. Opin. Chem. Biol. 1:1997;514-521 (g) Kimura E., Koike T. Sykes A.G. Advances in Inorganic Chemistry. Vol. 44:1997;229-261 Academic, San Diego. and references cited therein.
7. Reviews; (a) Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751-757 (b) Oivanen M., Kuusela S., Lönnberg H. Chem. Rev. 98:1998;961-990 (c) Trawick B.N., Daniher A.T., Bashkin J.K. Chem. Rev. 98:1998;939-960 (d) Pratviel G., Bernadou J., Meunier B. Sykes A.G. Advances in Inorganic Chemistry. Vol. 45:1998;251-312 Academic, San Diego, (e) Perreault D.M., Anslyn E.V. Angew. Chem., Int. Ed. Engl. 36:1997;432-450 (f) Chin J. Curr. Opin. Chem. Biol. 1:1997;514-521 (g) Kimura E., Koike T. Sykes A.G. Advances in Inorganic Chemistry. Vol. 44:1997;229-261 Academic, San Diego. and references cited therein.
8. 5 sites.
9. The half-life of the phosphodiester linkage in DNA at pH 7 and 30°C is estimated to be 200 million years.
10. (a) Matsumoto Y., Komiyama M. Nucleic Acids, Symp. Ser. 27:1992;33-34.
11. (b) Komiyama M., Matsumura K., Yonezawa K., Matsumoto Y. Chem. Express. 8:1993;85-88.
12. (c) Shiiba T., Yonezawa K., Takeda N., Matsumoto Y., Yashiro M., Komiyama M. J. Mol. Catal. 84:1993;L21-L25.
13. Komiyama M., Takeda N., Shigekawa H. Chem. Commun. 1999;1443-1451.
14. (a) Matsumura K., Komiyama M. J. Chem. Soc., Chem. Commun. 1992;640-641.
15. (b) Morrow J.R., Buttrey L.A., Shelton V.M., Berback K.A. J. Am. Chem. Soc. 114:1992;1903-1905.
16. (a) Komiyama M., Shiiba T., Kodama T., Takeda N., Sumaoka J., Yashiro M. Chem. Lett. 1994;1025-1028.
17. (b) Takasaki B.K., Chin J. J. Am. Chem. Soc. 116:1994;1121-1122.
18. Komiyama M., Takeda N., Takahashi Y., Uchida H., Shiiba T., Kodama T., Yashiro M. J. Chem. Soc., Perkin Trans. 2. 1995;269-274.
19. Matsumura K., Komiyama M. J. Biochem. 122:1997;387-394.
20. (a) Komiyama M., Shiiba T., Takahashi Y., Takeda N., Matsumura K., Kodama T. Supramol. Chem. 4:1994;31-34.
21. (b) Komiyama M. J. Biochem. 118:1995;665-670.
22. (a) Matsumura K., Endo M., Komiyama M. J. Chem. Soc., Chem. Commun. 1994;2019-2020.
23. (b) Hall J., Hüsken D., Häner R. Nucleosides Nucleotides. 16:1997;1357-1368.
24. (c) Magda D., Wright M., Crofts S., Lin A., Sessler J.L. J. Am. Chem. Soc. 119:1997;6947-6948.
25. (d) Huang L., Chappell L.L., Iranzo O., Baker B.F., Morrow J.R. J. Biol. Inorg. Chem. 5:2000;85-92.
26. Sumaoka J., Azuma Y., Komiyama M. Chem. Eur. J. 4:1998;205-209.
27. Shigekawa H., Ikawa H., Yoshizaki R., Iijima Y., Sumaoka J., Komiyama M. Appl. Phys. Lett. 68:1996;1433-1435.
28. Igawa T., Sumaoka J., Komiyama M. Chem. Lett. 2000;356-357.
29. Sumaoka J., Igawa T., Yagi T., Komiyama M. Chem. Lett. 2001;20-21.
30. Kitamura Y., Komiyama M. Nucleic Acids Res. 30:2002;e102.
31. Monophosphates are also hydrolyzed by Ce(IV) ion: Miyama S., Asanuma H., Komiyama M. J. Chem. Soc., Perkin Trans. 2. 1997;1685-1688.
32. 6 in homogeneous acidic solutions showed that dinuclear Ce(IV) cluster is the active species (Ref. 5). This result indicates that the Ce(IV)/EDTA complex involving two Ce(IV) is the active species, although more detailed analysis is certainly required to obtain a concrete conclusion.