The BH1999 Protein of Bacillus halodurans C-125 Is Gentisyl-Coenzyme A Thioesterase

Journal of Bacteriology

Volumn 186, Issue 2, 2004, Pages 393-399

  Zhuang, Zhihao ^a   Song, Feng ^a   Takami, Hideto ^b   Dunaway Mariano, Debra ^a  

^a UNIVERSITY OF NEW MEXICO   (United States)

^b JAPAN AGENCY FOR MARINE EARTH SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

2,5 DIHYDROXYBENZOYL COENZYME A THIOESTERASE; ACYL COENZYME A; ASPARTIC ACID; BACTERIAL PROTEIN; GENTISYL COENZYME A THIOESTERASE; PROTEIN BH1999; THIOL ESTER HYDROLASE; UNCLASSIFIED DRUG;

ARTICLE; BACILLUS; BACILLUS HALODURANS; BACTERIAL GENE; BACTERIAL STRAIN; CATALYSIS; CONCENTRATION (PARAMETERS); ENZYME ACTIVITY; ENZYME SPECIFICITY; GENE CLUSTER; NONHUMAN; OXIDATION; PH; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN FUNCTION; PROTEIN HYDROLYSIS;

AMINO ACID SEQUENCE; BACILLUS; CATALYSIS; GENTISATES; HYDROGEN-ION CONCENTRATION; MOLECULAR SEQUENCE DATA; RECOMBINANT PROTEINS; THIOLESTER HYDROLASES;

BACILLUS HALODURANS; BACILLUS HALODURANS C-125; BACTERIA (MICROORGANISMS); FELIS CATUS; POSIBACTERIA; PROKARYOTA;

EID: 0346024117     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.186.2.393-399.2004     Document Type: Article

References (31)

1. Altenschmidt, U., B. Oswald, E. Steiner, H. Herrmann, and G. Fuchs. 1993. New aerobic benzoate oxidation pathway via benzoyl-coenzyme A and 3-hydroxybenzoyl-coenzyme A in a denitrifying Pseudomonas sp. J. Bacteriol. 175:4851-4858.
2. Bayly, R. C., P. J. Chapman, S. Dagley, and D. Di Berardino. 1980. Purification and some properties of maleylpyruvate hydrolase and fumarylpyruvate hydrolase from Pseudomonas alcaligenes. J. Bacteriol. 143:70-77.
3. Benning, M. M., G. Wesenberg, R. Liu, K. L. Taylor, D. Dunaway-Mariano, and H. M. Holden. 1998. The three-dimensional structure of 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. strain CBS-3. J. Biol. Chem. 273:33572-33579.
4. Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
5. Chae, J. C., Y. Kim, Y. C. Kim, G. J. Zyistra, and C. K. Kim. 2000. Genetic structure and functional implication of the fcb gene cluster for hydrolytic dechlorination of 4-chlorobenzoate from Pseudomonas sp. DJ-12. Gene 258:109-116.
6. Fairley, D. J., D. R. Boyd, N. D. Sharma, C. C. Allen, P. Morgan, and M. J. Larkin. 2002. Aerobic metabolism of 4-hydroxybenzoic acid in Archaea via an unusual pathway involving an intramolecular migration (NIH shift). Appl. Environ. Microbiol. 68:6246-6255.
7. Fuchs, G., M. Mohamed, U. Altenschmidt, J. Koch, A. Lack, R. Brackmann, R. Lochmeyer, and B. Oswald. 1994. Biochemistry of anaerobic biodegradation of aromatic compounds, p. 513-553. In C. Ratledge (ed.), Biochemistry of microbial degradation. Kluwer Academic Publishers. Dordrecht, The Netherlands.
8. Fuenmayor, S. L., M. Wild, A. L. Boyes, and P. A. Williams. 1998. A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. strain U2. J. Bacteriol. 180:2522-2530.
9. Goetz, F. E., and L. J. Harmuth. 1992. Gentisate pathway in Salmonella typhimurium: metabolism of m-hydroxybenzoate and gentisate. FEMS Microbiol Lett. 76:45-49.
10. Gorny, N., and B. Schink. 1994. Hydroquinone degradation via reductive dehydroxylation of gentisyl-CoA by a strictly anaerobic fermenting bacterium. Arch. Microbiol. 161 1, 25-32.
11. Grund, E., B. Denecke, and R. Eichenlaub. 1992. Naphthalene degradation via salicylate and gentisate by Rhodococcus sp. strain B4. Appl. Environ. Microbiol. 58:1874-1877.
12. Harwood, C. S., and R. E. Parales. 1996. The beta-ketoadipate pathway and the biology of self-identity. Annu. Rev. Microbiol. 50:553-590.
13. Horikoshi, K. 1999. Alkaliphiles: some applications of their products for biotechnology. Microbiol. Mol. Biol. Rev. 63:735-750.
14. Jones, D. C., and R. A. Cooper. 1990. Catabolism of 3-hydroxybenzoate by the gentisate pathway in Klebsiella pneumoniae M5a1. Arch. Microbiol. 154:489-495.
15. Kelley, L. A., R. M. MacCallum, and M. J. Sternberg. 2000. Enhanced genome annotation with structural profiles in the program 3D-PSSM. J. Mol. Biol. 299:499-520.
16. Liang, P. H., G. Yang, and D. Dunaway-Mariano. 1993. Specificity of 4-chlorobenzoyl coenzyme A dehalogenase catalyzed dehalogenation of halogenated aromatics. Biochemistry 32:12245-12250.
17. Mahuran, D. J., R. H. Angus, C. V. Braun, S. S. Sim, and D. E. Schmidt, Jr, 1977. Characterization and substrate specificity of fumarylacetoacetate fumarylhydrolase. Can. J. Biochem. 55:1-8.
18. Matyus, P., E. Zara, L. Farkos, A. Papp, A. Simay, L. Toddy, F. Andrasi, K. Goldschmidt, E. Hodula, I. Mathe, K. Sutka, Z. Fittler, V. Vitkoczi, L. Sebestyen, I. Sziraki, M. Rusz, and E. Gal. 1998. N-benzoyl amino acid derivatives, pharmaceutical compositions containing them, and process for their preparation. U. S. patent 5,705,529.
19. Niemetz, R., U. Altenschmidt, S. Brucker, and G. Fuchs. 1995. Benzoylcoenzyme-A 3-monooxygenase, a flavin-dependent hydroxylase. Purification, some properties and its role in aerobic benzoate oxidation via gentisate in a denitrifying bacterium. Eur. J. Biochem. 227:161-168.
20. Poh, C. L., and R. C. Bayly. 1980. Evidence for isofunctional enzymes used in m-cresol and 2, 5-xylenol degradation via the gentisate pathway in Pseudomonas alcaligenes. J. Bacteriol. 143:59-69.
21. Rani, M., D. Prakash, R. C. Sobti, and R. K. Jain. 1996. Plasmid-mediated degradation of o-phthalate and salicylate by a Moraxella sp. Biochem. Biophys. Res. Commun. 220:377-381.
22. Robson, N. D., S. Parrott, and R. A. Cooper. 1996. In vitro formation of a catabolic plasmid carrying Klebsiella pneumoniae DNA that allows growth of Escherichia coli K-12 on 3-hydroxybenzoate. Microbiology 142:2115-2120.
23. Scholten, J. D., K. H. Chang, P. C. Babbitt, H. Charest, M. Sylvestre, and D. Dunaway-Mariano. 1991. Novel enzymic hydrolytic dehalogenation of a chlorinated aromatic. Science 253:182-185.
24. Takami, H., and K. Horikoshi. 1999. Reidentification of facultatively alkaliphilic Bacillus sp. C-125 to Bacillus halodurans. Biosci. Biotechnol. Biochem. 63:943-945.
25. Takami, H., and K. Horikoshi. 2000. Analysis of the genome of an alkaliphilic Bacillus strain from an industrial point of view. Extremophiles 4:99-108.
26. Takami, H., K. Nakasone, Y. Takaki, G. Maeno, R. Sasaki, N. Masui, F. Fuji, C. Hirama, Y. Nakamura, N. Ogasawara, S. Kuhara, and K. Horikoshi. 2000. Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis. Nucleic Acids Res. 28:4317-4331.
27. Thoden, J. B., H. M. Holden, Z. Zhuang, and D. Dunaway-Mariano. 2002. X-ray crystallographic analyses of inhibitor and substrate complexes of wild-type and mutant 4-hydroxybenzoyl-CoA thioesterase. J. Biol. Chem. 277:27468-27476.
28. Werwath, J., H. A. Arfmann, D. H. Pieper, K. N. Timmis, and R. M. Wittich. 1998. Biochemical and genetic characterization of a gentisate 1,2-dioxygenase from Sphingomonas sp. strain RW5. J. Bacteriol. 180:4171-4176.
29. Xiang, H., J. Dong, P. R. Carey, and D. Dunaway-Mariano. 1999. Product catalyzes the deamidation of D145N dehalogenase to produce the wild-type enzyme. Biochemistry 38:4207-4213.
30. Zhou, N. Y., S. L. Fuenmayor, and P. A. Williams. 2001. nag genes of Ralstonia (formerly Pseudomonas) sp. strain U2 encoding enzymes for gentisate catabolism. J. Bacteriol. 183:700-708.
31. Zhuang, Z., F. Song, W. Zhang, K. Taylor, A. Archambault, D. Dunaway-Mariano, J. Dong, and P. R. Carey. 2002. Kinetic, Raman, nuclear magnetic resonance, and site-directed mutagenesis studies of the Pseudomonas sp. strain CBS3 4-hydroxybenzoyl-CoA thioesterase active site. Biochemistry 41:11152-11160.